Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------DEAR3(1)            --------->SPL1(2)            --------->SPL7           --------->SPL1(1)           <---------SPL1(1)          --------->ZAT14          <---------SPL7          <---------ZAT14                <---------YAB1                      --------->ANAC58       <------------------SPL14    ------->TEIL                              --------->ANAC58 -------TOE1(2)                    <-------TEIL             --------->WOX13(1)                <------ -->ZmHOX2a(1)               <---------YAB1  <<<<<<<<<<<<<<<<<LFY   --------->AHL20(2)        -------   tagttttctctctgtacggcgatagtagatgatgatgtacatgttgataacattggccctatctatcaatttttatatcacccaaattcacagacgtaca  7878900                                        --------->YAB1         <---------YAB1                                        --------->AHL20(2)  ------->MYC3                             --------->STY1(2)          <-------TEIL                             <---------STY1(2)   <---------MYB52(2)                          <---------ANAC58      --------->ANAC58         <-------GAMYB                          <---------ANAC58      --------->ANAC58     <---------ANAC58                <-----------GT1         <---------AHL20(2)  <-------MYC3<---------MYB46(3) -TEIL       <---------AHL20(2)      --------->YAB1     ------->TEIL <---------ANAC58 >TEIL      --------->AHL20(2)    --------->YAB1--------->ANAC46     <---------ANAC46     -----------   tgtgaaaactaaaattttatactgtttcgcttgctagaataataatatgcaagaaacgtacatgtgtgattgtgtggttactgttttttgagaattcaaa  7879000                                                                  --------->AHL20(2)                                                                  --------->AHL20(1)                                               ----------->RAV1(1)<---------AHL20(1)                                           --------->ANAC46     <---------AHL20(1)           <-------                                           --------->ANAC58     --------->AHL20(1)           --------                                           --------->ANAC58     <---------ARR11(3)       <---------YAB1                                       --------->YAB1           --------->ARR11(3)  <---------ZAT6           --------->YAB1         --------->AHL20(2)         --------->AHL20(2)     ----------->GT1      --------->AHL20(2)          <---------AHL20(2)    ----------->GT1        <---------AHL20(2) ------------->ANAC81            <---------WOX13(1)    ----------->GT1    <---------AHL20(2) <-------   aaaaaaaaaaaaatcatcttaaacaatcgaacttgattaattcataagccaacaaaattggaaaaaaatattttagtttattttaagtgttataaaaaat  7879100       <---------YAB1      --------->AHL20(1)     <---------AHL20(2)     --------->AHL20(2)     --------->ATHB51     <---------ICU4    <---------YAB1    --------->ICU4             <---------ANAC55(2)  --------->YAB1   <---------YAB1                            <-------TEIL  <---------ICU4  --------->AHL20(1)                         ------->TEIL <---------YAB1   <---------AHL20(1)                     <---------------AtSPL8 --------->ICU4   <---------AHL20(2)               --------->ANAC55(2)                         ------ --AHL20(1)      --------->AHL20(2)        <-------TEIL  --------------->AtSPL8        <-----------HVH21 ->AHL20(2)      --------->YAB1----------->GT1     <---------ANAC55(2)              <---------ANAC58 --AHL20(2)     <---------YAB1--------->MYB59      ----------->GT1                  <---------ANAC58   ttgataattattttagttattatatttgaaaataggtaaaataggttcttaatatgtaacatgtacatttttgcatatttctaattcggtgtcatccata  7879200                                                                       ---------->ID1                                                                       ------>NtERF2            -----                                                                  <---------ARR14(2)            <----                                                ----------->GT1   --------->ARR14(2)           ------                                         --------->At4g35610  ----------------->AGL1  <---------ARR11(3)         ----------->GT1                 --------->LBD16      <-----------------AGL1  --------->ARR11(3) --->AtLEC2       --------->YAB1   <---------AHL20(2)     --------->MYB59        --------->ANAC46   caaaaaacaaatggcaaaaatcagaatggatagagaattaatccgctaaaatgtaaatgttaggcccaaattcggcccattacacaaaaatctcagaggg  7879300                                                                           --------->ATHB12                                                                         <----------DOF2                                                                      ------>NtERF2<-----------RAV1(2)                                                                    <------NtERF2  ==================RAV                                                                    <---------At4g35610        <-----                                                                    --------->At4g35610       <------                                                                    --------->ATERF1(1)       <------                                                                   <---------DEAR3(2)         <------    --------->ANAC46          <---------ALFIN1                     <---------ATERF1(1)     ----------   <-------TEIL   --------->ANAC46                                 <---------RAP2.3(1)    <-------GAMYB ------>GT1   <---------HSFB2a(2)  <---------ANAC55(2)            <---------DEAR3(1)     --------->MYB52(2) ---GAMYB     --------->HSFB2a(2)*TSS                             <---------RAP2.3(3)    <-----------RAV1(1) ----->GT1<---------DAG2    ------>ZmHOX2a(1)                    --------->RAP2.6(3)     <---------MYB46(3)   ttaaatacatcaccttctcgacgctaattcctccactacgtctctctctcttgctctccctcttcaagtcggctcctttattgctacaggtttgttgctt  7879400 -----DOF2                                 --------->TOE2(3) ---ANAC58                   <---------TOE2(3)                                   <---------AHL20(2) ---ANAC58            ----------------->AGL3                        <---------ANAC55(2)             - ---ANAC46           ------>NtERF2--------->MYB52(2)      <----------DOF2        --------->AHL20(2)XX >ID1         <----------DOF2<---------TOE1(3)   <---------ATHB51   --------->ANAC55(2)     <--------   cttcgattcaattcttctttcgcctccaattagggtttgtttcgacctcaaattatgcaactttgggattatgtgattagaatttaaatttcggtgtttg  7879500                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                    <---------AGP1  --------->ARR11(3)                                                                    --------->AGP1<---------YAB1                                                                    <---------ARR11(3)                                                                   <---------CCA1(2)<---------ARR11(3)                                                      <---------MYB46(3)          --------->ICU4                                                     <---------ATHB12      <-------GAMYB                                                   --------->MYB52(1) ------>ZmHOX2a(2)                            <---------YAB1    <-----------GT1 <----------DOF2   --------->YAB1 ------>TEIL             <---------YAB1<---------TOE1(2)    ---------->ID1<-----------RAV1(1) XXXXXXXXXXXXXXXXXX>MIR865-5P<-----------RAV1(1)>>>>>>>>>>>>>>>>>LFY--------->ARR11(3) -MYB46(3)    --------->ATHB12         <---------TOE2(2) <-------TEIL<------ZmHOX2a(2)------>ZmHOX2a(2)   tgaatctaaatctagttgattagcattcttattgttgttcatacgttttaacccaatggttcgtcttttagatcttctgttgtcatgatctggttttatg  7879600                                         ===============================HOX2a_HOX2a                                         ====================================HOX2a_HOX2a                                         ------>ZmHOX2a(1)                                         ==========================HOX2a_HOX2a                                         =====================HOX2a_HOX2a                                <------MYB83                                <------MYB46(1)                               <---------MYB46(3)                              <---------ANAC46         ------>ZmHOX2a(2)                            --------->MYB52(2)    ------>ZmHOX2a(2)                            --------->MYB55(2)   <---------At4g35610                            <------MYB46(1) <---------ANAC58                            <------MYB83 ================HOX2a_HOX2a  ------>ZmHOX2a(2)                            <---------MYB46(3)  <---------ARR11(3)   --------->GLK1(1)                        --------->ATHB12--------->TOE2(3)  <---------At4g35610                      ------->TEIL   <-----------GT1  <---------At4g35610     <---------DAG2       <-          <---------ANAC58 <---------AtMYB61<---------ANAC58------>ZmHOX2a(2) <----------DOF2      <-          <---------ANAC58 <---------DEAR3(1)   <---------AGP1   ------>ZmHOX2a(2)           --------          <---------ANAC46<---------MYB52(1)--------->ANAC55(2) <---------At4g35610         ---------   aaatagaaagtttcgtttttgatgaatcgttggtgggtttttccttacttgatctgatctgatctgatctgatctctctgctttatatcagtgaaaaagt  7879700                                --------->AtMYB61                                --------->TOE2(3)                              -------->P                              ------>MYB46(1)                             <---------ALFIN1                            <---------ALFIN1                          --------->ANAC46                      <----------DOF2                      <---------GLK1(1)                      --------->GLK1(1)                    <------NtERF2                   <---------RAP2.3(1)                   <---------ERF1                  <---------DEAR3(1)                                                    --------->bZIP60(1)                  <---------ANAC46                                                      --------->TGA2(1)                  <---------RAP2.3(3)                                                   <---------TGA2(1)    <----------DOF2------>NtERF2--------->TOE1(3)                                       <---------bZIP60(1) --------ANAC58   <---------RAP2.3(2)                                                   --------->REM1(1) --------ANAC58   <---------RAP2.6(2)          --------->LBD16                     <---------TOE1(2) ->DAG2          --------->RAP2.6(3)         <---------LBD16                    ------------>AtMYB77 ->DOF2   <<<<<<<<<<<<<<<<<LFY------>MYB83   <------NtERF2           <-----------ARR10 <-------TEIL   ttcgagctttagaaacaatggcggctttccccaacctcaactctggctccggattgaagaagctcgatgagcatcttctcactcgcagttacatcactgg  7879800  Previous    Next  AGI:  At2g18110.1    Description:  elongation factor 1-beta, putative / EF-1-beta, putative. Identical to Elongation factor 1-delta 2 [Arabidopsis Thaliana] (GB:Q9SI20;GB:Q7GA96;GB:Q8LB45); similar to elongation factor 1-beta / EF-1-beta [Arabidopsis thaliana] (TAIR:AT1G30230.1); similar to elongation factor 1-beta / EF-1-beta [Arabidopsis thaliana] (TAIR:AT1G30230.2); similar to putative elongation factor 1-beta [Brassica rapa] (GB:ABK78691.1); contains InterPro domain Translation elongation factor EF1B, beta/delta chains, conserved site; (InterPro:IPR001326); contains InterPro domain Translation elongation factor EF1B, beta and delta chains, guanine nucleotide exchange; (In Range:  from: 7879333    to: 7880994    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version