Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                   --------->AHL20(2)      ------>MYB83     <---------YAB1 <---------RVE1(1)              <---------AHL20(2)                      ------>MYB46(1) -------AHL20(2)   <---------ARR11(3)             <---------AHL20(2)                     --------->MYB46(3) -----AHL20(2)     --------->ARR11(3)             --------->AHL20(2)    <---------ARR11(3)--------->ORA47(1) ---AHL20(2)      <------ZmHOX2a(1)               <---------AHL20(1)   --------->RVE1(1)--------->DEAR3(2) ->ARR11(3)     <---------TOE2(3)           ----------->GT1      ----------->GT1       --------->MYB52(1) --ARR11(3)     <---------TOE1(3)       --------->AHL20(2)      <-------MYC3    ----------->GT1   --- --AHL20(1)<---------ZAT6<-----------GT1<---------AHL20(2)      ------->MYC3  --------------------->WRI1   tttttttttgatagggttaaggatttttttctatttttgtttttaaatgtaataaaatttgaaacacatgtaaatatcgtattagtaaataccgaccaaa  7852700              <---------AHL20(2)              --------->MYB52(1) --------->ARR11(3)                        --------->At4g35610 --------->AHL20(1)                        <---------At4g35610 <---------AHL20(1)                      --------->ZAT18                      ---------->DOF2 ->AtMYB61 ----------->GT1               <---------ZAT18     --------->AHL20(2)       ----------->GT1 ------>AHL20(2)                  --------->ICU4    --------->YAB1  --------->At4g35610     <--------   aaaaatattgtattagtaaatttgacacatatcgcaatttttgtgagctaacaattttaaaaatcaaataagatgacgaacaaagctctggtttaaactt  7852800                                                 <-----------GT1                                    --------->ATHB12                                    --------->ATHB51                                    <---------ICU4                                    --------->AHL20(2)                                    <---------AHL20(2)                                    <--------HAHB4                                   <---------ATHB12                         --------->ARR11(3)                                   <---------ATHB51                      --------->YAB1                        ------>MYB83-------->ATHB1            <---------MYB52(1)                   <-----------GT1 --------->ICU4<---------ICU4     <---------TOE2(3)               --------->TOE2(3) --------->WOX13(1)   <---------ANAC46--------->YAB1    <---------ATHB12    ------>MYB46(1)   ---------->ID1     --------->TOE2(3) ---GT1  --------->AHL20(2)  <-----------GT1<---------MYB59 --------->ANAC46<---------ARR11(3)   tctcccatcaattttttcattaaaccaaatttaaccaattatttggcctaataactgcgtctacgttattaagaataagaacttattttgtgtttcagta  7852900                                                  ------>NtERF2                                                 --------->DEAR3(1)                                               ------>NtERF2                                               --------->ABI4(1)                                               <---------ATERF1(1)                                              --------->ANAC46                                              --------->DEAR3(1)                                          <------ZmHOX2a(2)                                         <-----------HVH21                  ------->MYC3           --                                     <------ZmHOX2a(1)          <---------LBD16                    --                                 ---------->DOF2--------->ERF1  --------->HSFB2a(2)                --                       <---------------AGL15  --------->DREB2C(2)           <-------MYC3     <-------                       --------------->AGL15<---------At5g28300 <---------HSFB2a(2)       <---------MYB52(1)   gaaaacacactcgttcacaaaatgcctagtaagagtaaaggacgatcaccgccaccaagtgtgtttctcggataaacacatggaatccagccattactta  7853000         --------->ZAT18         --------->SPL7         <---------ZAT18       --------->REM1(2)     <-------MYC3     ------->MYC3     <-------MYC2     ------->MYC4     <-------MYC4     ------->MYC2    <--------ABF1                              ----------->HVH21    --------->O2                             --------->At4g35610    --------->ANAC55(2)          --------->ANAC58    <---------TGA1a              --------->ANAC58    --------->TGA1a              <---------ANAC55(2)                                       <---------ANAC58    <---------O2    <---------AHL20(2)    <------ZmHOX2a(2)                                ----------    <---------ANAC55(2)<---------YAB1    <---------ARR14(2)                       <---------ARR14(2)    <---------ANAC46--------->AHL20(2)   --------->ARR14(2) --------->MYB52(1)    --------->ARR14(2) ------->ANAC58  --------->ATHB12--------->ANAC55(2)     --------->TOE1(3)     --------->ANAC58     - ------->ANAC46 --------->ICU4   --------->ANAC46        --------->YAB1        --------->ANAC58   <-- ------->ANAC58 <---------YAB1   --------->ANAC55(1)     --------->TOE2(3)  --------->TOE1(2) ------- --ANAC55(2)  --------->YAB1<---------ZAT18  ------>ZmHOX2a(1)   <---------ARR14(2)        <---------ANAC58   aacgacacgtgtacgctcatgatttattaatgcacacgtaatcgatcctctgacaaaaaccataacgaatacagaaaacacacgaatacacttccctgcg  7853100                                                                                             --------                                                                                          ------>ZmHOX2a(2)                                                                                        --------->ARR11(3)                                                                                        <---------ARR14(3)                                                                                        --------->ARR14(3)                                                      <---------ALFIN1                  <---------ARR11(3)                                                    ----------->RAV1(1)                 --------->AGP1                                                 --------->ANAC58                       --------->ARR14(2)                                               ---------->DOF2                          <---------ARR14(2)                                            --------->AtLEC2                            <---------AGP1                                            --------->ANAC58         ===========================HOX2a_HOX2a              ----------->GT1               --------->ANAC58         ============================HOX2a_HOX2a ->RAV1(2)    --------->ANAC58         --------->ANAC58              ------>ZmHOX2a(1)----------->ARR10 ---------->TBP        --------->AHL20(2)   --------->ANAC46--------->ZAT6     <---------At4g35610 --------DOF2 --------->ANAC58    <----------ID1 --------->ANAC58   --------------->AGL15<------ZmHOX2a(2) -->ZAT14     --------->ANAC46  *TSS   --------->ANAC58  <----------DOF2       --------->At4g35610   ctataaataagctagcacgaaaaaatttaacagatagagacaagacaagcaaagcaacactttcactaatcctctaatggcagaagacaagatcttaaag  7853200              ---------->DOF2          <---------ANAC46         <------NtERF2         --------->RAP2.3(1)         --------->ATERF1(1)        <---------ATERF1(1)        <---------DEAR4(2)        <---------ERF1        ------>NtERF2        <---------RAP2.3(1)       <---------RAP2.3(3)       --------->ATERF1(2)       <---------RAP2.3(2)       <---------DEAR3(1)       <---------ATERF1(2)       --------->DEAR3(1)      <---------ABI4(1)      --------->ATERF1(1)                                      <---------AtMYB61     --------->LBD16------>NtERF2        <---------ATHB12    --------->ALFIN1     ------>NtERF2  --------->LBD16   <---------ALFIN1     --------->At4g35610     <---------RAP2.3(1)             --------->MYB46(3)    <---------At4g35610     <---------ATERF1(1)           --------->AtMYB61     <-----------RAV1(2)         <---------GLK1(1)    <---------DEAR3(1)            --------->MYB46(3)  <----------DOF2          <----------DOF2   <---------LBD16 --------->RAP2.6(2)--------->AtMYB61<-----------HVH21 <----------DOF2  ------>ZmHOX2a(1) -->DOF2<---------ORA47(2)     ---------->DOF2 ------>ZmHOX2a(1)         <---------DAG2   <---------CCA1(2)   aagactccggcggcgaagaagccgcgaaaaccgaaaaccaccactcatcctccatactttcaggtgaggttctaactttttcttttgagttcctatctat  7853300                                                                                  <---------MYB52(1)                                              <----------DOF2                --------->ANAC58                 <---------AtMYB61    ---------->DOF2               --------->MYB52(1)           ---------->ID1           <---------YAB1         ---------->DOF2   --------->ANAC58          <-----------GT1        ----------->GT1         ========================HOX2a_HOX2a --------->TOE2(3)               <---------YAB1          ------>ZmHOX2a(1)<------ZmHOX2a(2)   taaacttagttttttcgttttggtttttgatgaagatgataaaagaggctttgatggtcctgaaagagaagaacggatcaagcccttatgctatagctaa  7853400                                           ---------->DOF2                                         --------->LBD16                                        <---------ANAC55(2)                                        --------->ANAC55(2)                                        <---------ANAC46                                     --------->GLK1(2)                                     --------->ARR14(2)                                           <--                              --------->LBD16                            <-------GAMYB <---------At4g35610                             <---------HSFB2a(2)            --------->At4g35610        <---------ZAT2       <------ZmHOX2a(1)     --------->HSFB2a(2)  <----------DOF2       <-----------RAV1(1)      ----  --------->CCA1(2)  <----------DOF2 <---------ARR14(2)     <---------At4g35610---------->DOF2   <---   gaagatagaggagaaacacaagtctttacttccagagagtttccgtaaaacactttctctacagcttaaaaactctgttgctaaaggtaagctcgtgaag  7853500                                               --------->ZAT2                      --------->ARR14(2)       --------->At4g35610                                ---                      <---------ARR14(2)       <---------ZAT2  --------->YAB1                 <------ZmHOX2a(2)             --------->ANAC58                  <------NtERF2--------->YAB1                    =======             --------->ANAC58      --------->YAB1        --------->YAB1              --------->ARR11(3) ----ZmHOX2a(2)      --------->At4g35610       <---------At4g35610          --------->ANAC58 <------- ----->ARR11(3)      <---------At4g35610      ----------->RAV1(1)           --------->ANAC58 -------- ------ARR11(3)<---------ARR11(3) <---------YAB1   <------ZmHOX2a(1)  --------->GLK1(2)---------->DOF2   atcagagcctcttacaagctctcagataccaccaagatgataacgaggcagcaggacaagaagaataagaagaatatgaagcaagaagataaagagatca  7853600  Previous    Next  AGI:  At2g18050.1    Description:  HIS1-3 (HISTONE H1-3); DNA binding. similar to histone H1, putative [Arabidopsis thaliana] (TAIR:AT1G06760.1); similar to histone H1.2 [Arabidopsis thaliana] (TAIR:AT2G30620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48240.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Histone H1/H5; (InterPro:IPR005818); contains InterPro domain Linker histone, N-terminal; (InterPro:IPR003216); contains InterPro domain Histone H5; (InterPro:IPR005819) Range:  from: 7853132    to: 7853966    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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