Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <------MYB46(1)                            <------MYB83                           --------->MYB111(1)                           <---------TOE1(2) ------ANAC46              --------->MYB59                                                       ---- ---MYB52(1)          --------->ZAT14                         --------->TOE2(3)                  <--- ----HVH21            <---------ZAT14                     <----------DOF2   <---------TOE2(3)   <---- -ZAT6         <-----------GT1      --------->At4g35610<-----------GT1      <---------TOE1(3) -------   ggcgtaattcaatgtttaaaccagtttagtaggttctgagcgggatgtctaggtttttgacttttcttaacaacatttaaggttagagccatttagcaat  7851100                                                                                 <---------HSFC1(2)                                                                                 <---------HSFB2a(1)                                                                                 --------->HSFB2a(1)                                                                                 --------->HSFC1(2)                                                                            <---------HSFC1(1)                                                                  <---------AHL20(2)                                   --------->ARR14(2)             <---------ATHB12                              --------->AtLEC2                    --------->AHL20(2) --------->TOE2(3)       --------->ANAC58                         <---------ATHB51        <---------AHL20(2) ----->AHL20(2)          --------->ANAC58                 <------ZmHOX2a(1) <---------HSFB2a(2)    -- ------AHL20(2)          --------->ANAC46           <----------DOF2--------->AHL20(2)    --------->AHL20(2) -----ATHB12         <-----------GT1--------->GLK1(1)   <---------TOE2(3)   --------->HSFC1(1)   <--- -->WOX13(1)  <---------AHL20(2)   <---------ARR14(2)   <---------TOE1(3)   --------->HSFB2a(2)------   taatctaaacaggtttttattttaaacaagtcatgcagaactccattgtatgggatttaaggattcaaataattttctctagaaaattcgaataaatcgg  7851200                                                     <-------GAMYB                                                    ----------->GT1    <----------DOF2                                           <---------ANAC46          ================================                                           <---------ANAC55(2)       --------------->AGL15                                         <---------ICU4              <---------------AGL15       --------->AHL20(2)    <--------P --------->ICU4<---------ARR14(2)                            - ------->ATHB12    --------->CCA1(2) --------->AHL20(2)       <---------YAB1                       <- -------DOF2      --------->ARR11(3) <---------AHL20(2)     <----------DOF2                    <----- ----->GT1        <---------ARR11(3)<---------WOX13(1)--------->ARR14(2)                       <-----   tttattggtttaaattttgagatatatactggtaactgattaattatgtgaagccggttacacttttattgctctttgtagtcaatatttccaagttaat  7851300         <---------ANAC58         <---------ANAC46         <---------ANAC58                                                   <---------ARR11(3) <---------ANAC58                                                           --------->ARR11(3) <---------ANAC46                                              ---------->DOF2                ------- --------->ANAC55(2)                                          <---------AHL20(2)              <------ <---------ANAC55(2)                                          --------->AHL20(2)             <------- <---------ANAC58                                         <---------YAB1---------->DOF2   <---------YAB1 <---------ANAC55(1)                                      <---------------AGL15          --------->ARR11(3) ==========================================================================MADS_MADS     <---------ARR11(3) -------->MYB52(2)                                        --------------->AGL15   <---------TOE2(3) ----------GT1                                           <-----------------AGL2   <---------TOE1(3) ----TOE2(3)                                             ============================================ ----TOE1(3)                                             ----------------->AGL3  ---------->DOF2   gttacttgttttcttggagtttcaactctatttatacttataaaacaactattgaaatttctaattaaagcatccaaagatgttaaagtaagataattaa  7851400                                        <---------YAB1                                  ---------->DOF2             --------->ANAC58                                --------->YAB1                --------->ANAC58                             --------->YAB1                 ---------->DOF2                            <---------AHL20(2)         --------->WOX13(1)      <---------At4g35610 -->AHL20(2)            <---------AHL20(2)  <-----------RAV1(1)     --------->YAB1  <---------AHL20(2) ---AHL20(2)       ----------------->AGL3  <---------YAB1<---------ATHB12     <xxxxxxxxxxxxxxxxxxxxxx --YAB1 <-----------GT1 --------->AHL20(2)<------------CBF--------->YAB1  --------->TOE1(3)        <- ====================================MADS_MADS       ------------>CBF  <-----------GT1             <-   tgtcatagtttcacatttcattccatataaataatcaaaagtcttattgttgttcatcaatcaaaagcaaatataaccttcagcatatatttggctatac  7851500                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <---------ARR14(2)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                           <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)            ------------>CBF                               <-----------ARR10         <-----------GT1                                 <---------MYB46(3)     <----------DOF2                                  --------->MYB52(1)   <-------TEIL              *TSS--------->YAB1      ------>ZmHOX2a(1)                       xxxxxxxx xsmallRNA(le3)             xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------TOE1(3)        <---------ICU4         <xxxxxxxxxxxxxxxxsmallRNA(s)               <---------At4g35610 --------TOE2(3)    <---------YAB1          <----------DOF2--------->ARR14(2)             --------->At4g35610   taaggttctttttactcaatttctcattatgtctataaaaaatatgctttcactcctagcggttctatgcatcatcgtttctgtaaatgcttagatgcct  7851600                                                                                                -----                                                                                                xxxxx                                                                                                xxxxx                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                             xxxxxxxx                                                                                             <xxxxxxx                                                                                             xxxxxxxx                                                                                           <---------WOX13(1)                                                                                         xxxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        ----------->HVH21                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                       --------->LBD16                                                                                      <---------ANAC55(2)                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                              xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                 <---------bZIP60(1)  xxxxxxxxxxxxxxx                                                                 --------->bZIP60(1)  --------->ANAC55(2)                                                            <---------ANAC55(2)    xxxxxxxxxxxxxxxx>smallRNA(s)                                                       <------ZmHOX2a(1)   <-----------RAV1(1)<------                 <----------DOF2                       <---------ICU4     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 <---------DAG2                       --------->ICU4    xxxxxxxxxxxxxxxx>smallRNA(i)        ------>NtERF2                                >>>>>>>GRF7<<<<<<<GRF7xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     ------>NtERF2                          ------>ZmHOX2a(1)<---------MYB59  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------ATERF1(1)                    --------->LBD16 --------->At4g35610  --------->WRKY18(1)     --------->LBD16                       <---------ANAC46 ----------->RAV1(2) <xxxxxxxxxxxxxxxxsmallRNA(s)    <---------RAP2.6(2)                 --------->ARR14(2)  --------->ANAC55(2)<------MYB83<---------ANAC46   <---------LBD16                      <---------ARR14(2)  ===========================RAVxxxxxxxxxxx --------->ARR14(2)                    <---------GLK1(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   < <---------ARR14(2)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxx>smallRNA(s)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)----------->HVH21<------MYB46(1)-------   cagtttccggctccatttcctttttcatttctattcgaaccgattcctggtatgtcaggattacctgacataacaaaatgttggtcatccgtgatggata  7851700      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <-------TEIL     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ------>ZmHOX2a(1) --------->LBD16 <---------HSFB2a(2) ---->KAN4(2) xxxxxxxxxx>smallRNA(si3) xxxxxxxxxx>smallRNA(le3) -----TaMYB80 ----GLK1(1) ----KAN4(1) -->ARR11(3)                                               <-------TEIL xxxxxxxxxxxxxxx>smallRNA(si3)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxsmallRNA(se3)                   <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxx>smallRNA(le3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxx>smallRNA(si3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxsmallRNA(s)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxx>smallRNA(fl3)                  --------->ARR14(2) xxxxxxxxxx>smallRNA(si3)                  <---------ARR14(2)                            --------->ZAT14 xxx>smallRNA(s)                          --------->HSFC1(2)                          <---------At4g35610 xxxxxxxxxx>smallRNA(se3)                 --------->HSFB2a(1)                     <---------SPL7 x>smallRNA(s)    --------->ARR14(2)      <---------HSFB2a(1)             xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ---ARR14(2)      <---------ARR14(2)      <---------HSFC1(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxx>smallRNA(se3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <-----------RAV1(1)   < ---------LBD16<---------TOE2(3)      ----------->GT1     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      < -->ARR14(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     --------->MYB59 ---------->DOF2--------->At4g35610   ttcctggatgcattgtagaggtttctcaatctattttcactggaaaattcggcaatttaggtccatcttgttgtaaagcattgttggacgctgaagtcaa  7851800                                                                              ------>ZmHOX2a(1)                                                                          <---------ALFIN1         --------->HSFC1(2)                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         --------->HSFB2a(1)                                        <---------PCF2         <---------HSFC1(2)                                        <---------ANAC58         <---------HSFB2a(1)                                       <---------ANAC58     ----------->GT1        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)  <---------MYB46(3)  --------->AtLEC2          <-----------GT1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---------ANAC58 <---------ATHB12         ---------->DOF2        <---------ANAC46------>ZmHOX2a(1) ---------ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <-----------RAV1(1)   ttccatgccgaaaattccattcattctgtttttccctccgatgctaaaggaacaatgctcaagaattgtgggtgcaactcctcctataccaaaatagagt  7851900                                                          <---------ANAC58                                                          <---------ANAC58                               <----------DOF2           --------->At4g35610               --------->MYB52(1)                            <-----------GT1              <---------At4g35610        ----------->GT1                     --------->YAB1                  <---------REM1(1)            ---------->DOF2               --------->ARR11(3)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<----------ID1               --------->GLK1(2)            <---------AHL20(2)               <---------------AGL15               <---------ARR11(3)           --------->ATHB12                 --------------->AGL15 <---------At4g35610<---------YAB1         <---------AHL20(2) --------->ZAT6--------->ANAC46    <----   tttagcttagttttaaaaatctatgatttttttcttttcaacttatttattgaaattgtagcttactctacatgttatactccaaaaagaaaaaaacgat  7852000  Previous    Next  AGI:  At2g18042.1    Description:  Encodes a ECA1 gametogenesis related family protein [pseudogene] Range:  from: 7851529    to: 7851897    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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