Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ANAC58                       --------->ARR11(3)                       <---------AHL20(1)                       --------->AHL20(1)                       <---------ARR11(3)----------->GT1          --------->ARR14(2)           --------->ANAC55(2)          --------->ARR11(3)           <---------ANAC46    --------->ETT(2)  --------->YAB1   <---------ANAC55(2) ----------DOF2  <---------At4g35610   <---------ANAC55(1) ---------DAG2   --------->At4g35610   <---------ANAC58 -->ANAC46<---------GLK1(2)          <-----------GT1 ----------->GT1                               -- -->ANAC58<---------ARR11(3) ----------->GT1         --------->YAB1                               <-- -->ANAC58<---------ARR14(2)--------->MYB59         <---------YAB1         ------->TEIL         -----   aacttttcgacagattttcagcaaaaatattcggtaatataacgtgttaaaaatatgataaaaaaaaaaacttgatgaatctactaaaactaaattttca  7843800                                                                                       <-------TEIL                                                                                   <---------AHL20(1)                                                                                   --------->AHL20(1)                                                                                   <---------AHL20(2)                                       <---------YAB1  <--------HAHB4             --------->AHL20(2)                                      <---------AHL20(2)                          --------->YAB1           <---------YAB1        --------->AHL20(1)    --------->AHL20(2)         <---------AHL20(2)      <---------ARR11(3)         <---------AHL20(1)    --------->ATHB51     ----------->GT1      --------->ARR11(3)         <---------AHL20(2)    <---------AHL20(2) ----------->GT1     <---------CCA1(2)           --------->AHL20(2)    -------->ATHB1     <---------ANAC58 ------->YAB1           <---------AHL20(2)            --------->ICU4      <---------ANAC58 -------ATHB12     <---------AHL20(1) <---------AHL20(1)   <---------AHL20(2)    --------->ICU4 ----- ---->WOX13(1)    <---------CCA1(2) <---------YAB1    <---------ATHB51    <---------ANAC46  <--------   atcatatatatctattattcatatatttcattcattttattatttttctcttaacaattatttagttattctggtatcgtgtaattatattcatatgatt  7843900                                            <----------DOF2                                      <--------P <-----------GT1                         ----------->GT1<------MYB46(1)                       <---------LBD16--------->ALFIN1                               <------MYB46(1)  <---------YAB1<---------MYB52(1)    <<<<<<<<<MYB98                                 <------MYB83 ---->AHL20(2) <-------GAMYB         <-------GAMYB                              --------->ATHB12----- -YAB1   --------->ATHB12--------->LBD16<------MYB83                           <---------YAB1 <------   tattctgatattgattcggttagcatccggataaatctgggttgggctttttaacttggtttttctaagaaaaattctaatatgatttggttagcatccg  7844000                 <---------ANAC58                 <---------ANAC58               <------MYB83               <------MYB46(1)             <--------P                                                                         -----           <------MYB83<----------DOF2                                               <---------At4g35610          --------->MYB46(2)                                          --------->REM1(1)       <------          --------->MYB111(2)                                         --------->ANAC46 ----------->HVH21          --------->MYB59       --------->TOE2(3)                    <---------ZAT14 ----------->RAV1(2) ---->LBD16<------MYB46(1) <---------YAB1                            --------->ZAT14 --------->At4g35610 ---LBD16 --------->MYB111(1) --------->ICU4<----------DOF2      <---------ICU4 <---------GLK1(2)   gattagtctagtttggtaggcctgcctttgtgattcttaactcggtcttttgtatgggtttgaacaattactacaccatttagattcttctgacccatat  7844100       --------->CCA1(2)       <------ZmHOX2a(2)      <---------ARR11(3)      <---------ARR14(2)                                                                        -----      --------->ARR14(2)                                                              <---------AGP1      --------->AGP1                 --------->YAB1                                   <---------ARR11(3)      --------->ARR11(3)         --------->MYB46(3)                                   --------->ARR11(3)  ---------->DOF2        <---------ZAT6                                ========================HOX2a_HOX2a --------->AHL20(2)     <---------TOE2(3)                     <-------TEIL           <---------CCA1(2) ------------>AGL3      <---------TOE1(3)                  ----------->GT1          *TSS        ----- ---CCA1(2)      ----------------->AGL1                ---------->DOF2 ------>ZmHOX2a(1)------>ZmHOX2a(2)   caaataaagatccacttaggcccattagggttagaacaaacatgaggttgcagaataaaaagggttcattttcctcactctcaagttggatctcaaaacc  7844200                                                                      --------->ANAC55(2)                                                                      <---------ANAC55(1)         ---                                                                      <---------ANAC46          -----                                                                      <---------ANAC55(2)      ------                                               <---------At4g35610    <---------ANAC58      <--------                                               --------->At4g35610    <---------ANAC58      ---------                   --------->HSFB2a(2)    --------->At4g35610      --------->ARR14(2)       ---------                  <---------ETT(2)        <---------At4g35610      <---------ARR14(2)      --------->MYB46(3)                  --------->ETT(2)      --------->bZIP60(1)    <---------ANAC58          --------->ANAC46                 <------NtERF2          <---------bZIP60(1)    <---------ANAC46        --------->ANAC58                ------>NtERF2         <-----------HVH21        <---------ANAC58        --------->ANAC46  <---------ARR11(3)               <---------ANAC58           <---------LBD16          --------->ANAC58  --------->ARR11(3)               <---------ANAC46          --------->ALFIN1        <---------ALFIN1 ---->TOE2(3)   <-----------HVH21  <---------ANAC58     --------->MYB52(1)         <---------ALFIN1 - ---->TOE1(3)  --------->DEAR3(1)<-----------HVH21   --------->ANAC46<-----------------------TaNAC69(2)   ctaatatctgaacttcgccgtcgagagcatccatgggtcgtgtcatcagagctcaacgtaagggtgcgggttccgtcttcaaatcccacactcaccaccg  7844300                                                                       ==============================                                                                       <------ZmHOX2a(2)                                                                       ====================HOX2a_HOX2a                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)                                                                     <---------GLK1(1)                                                                 <---------ANAC46                                                               --------->MYB52(1)                                                              ----------->HVH21                                                              ----------->TGA1      --------->LBD16                                        <-----------HVH21            --------->ALFIN1     <---------RAP2.6(2)                                    <---------ANAC46            <---------ANAC58    <---------LBD16                                         <---------TGA1a         ------>ZmHOX2a(1)    <-------TEIL   --------->ARR14(2)                       --------->TGA1a      <------ZmHOX2a(2) ------->DOF2   <---------ANAC55(2)                         --------->O2         ==================== ---->LBD16     <---------ANAC58                            <---------O2        --------->ARR11(3) --->DEAR3(1)   --------->ANAC55(2)                        <------NtERF2        <---------ARR14(2) -ALFIN1        <---------ANAC46                         <---------ANAC58       --------->ARR14(2) >DEAR3(1)      <---------ANAC58                         <---------ANAC58       <---------ARR11(3) >AtMYB61  ----------->ARR10                             <---------DEAR3(1)   --------->ANAC46     -- ---------->ARR10--------->LBD16                 --------->TOE2(3)   --------->GLK1(1)  <---------ANAC58   caaaggtccggctaagttccgtagcctcgatttcggcgagagaaatggttacctcaagggcgtcgtgacggagatcatccacgatcctggtcgtggtgct  7844400                                                                 --------->DEAR3(1)                                                                <------NtERF2                                                                --------->RAP2.3(1)                                                                --------->ATERF1(1)                                                               <---------ATERF1(1)                                                               --------->At4g35610                                                               --------->LBD16                                                               ------>NtERF2                                                               --------->ABI4(1)                                                              <---------DEAR3(1)                                                              --------->RAP2.3(2)                                                              --------->RAP2.3(3)                                                              --------->DEAR3(1)                                                              <---------ATERF1(2)                                                              --------->ATERF1(2)                                                             --------->ORA47(2)                                                             --------->ERF1                                                             --------->ATERF1(1)                                                             --------->DEAR4(2)                                                             --------->RAP2.3(1)                              <---------ANAC58               <------NtERF2                              <---------ANAC58               --------->RAP2.6(1)                              <---------------AGL15          --------->RRTF1(1)                   <-----------TGA1                         <---------RAP2.3(1)              <----------DOF2 --------------->AGL15         ------>NtERF2              <---------DAG2 ----------------->AG  <---------ARR11(3)           <-----------GT1   ----------------->AGL1--------->ARR11(3)         <-----------HVH21------>ZmHOX2a(1)       <---------GLK1(1)    <---------ANAC58      <----------DOF2         --------->GLK1(1)                              <---    <---------ANAC58<---------MYB52(1)      ---------->DOF2 <---------ATERF1(1)                  <--- =====HOX2a_HOX2a  <-----------HVH21 --------->ANAC58      <---------DEAR3(1)          --------->ARR11(3) =====HOX2a_HOX2a --------->ANAC46   --------->ANAC58      --------->DEAR3(1)     <-----------HVH21 - ---->ZmHOX2a(1)  --------->ANAC55(2)--------->ANAC46    <-----------HVH21  --------->ZAT18      ----   cctcttgctcgtgtcactttccgtcatcctttccgtttcaagaaacaaaaggagctcttcgtcgccgccgaaggtatgtacaccggtcagttcttgtact  7844500                                                                                               ======                                                                                               ------                                                                                           ----------                                                    ------>ZmHOX2a(1)                    <---------DEAR3(2)                                             ===================HOX2a_HOX2a             <---------DREB2C(2)                                             ------>ZmHOX2a(2)                          <---------DEAR3(1)       --------->ANAC58                      ==============HOX2a_HOX2a                  <---------At1g77200       --------->ANAC58                     ===============HOX2a_HOX2a                <-----------HVH21     ---------->DOF2                        ====================HOX2a_HOX2a          --------->ANAC46   --------->ANAC58                         <------ZmHOX2a(2)                        --------->O2   --------->ANAC58                        --------->ARR11(3)                        --------->TGA1a ------ZAT14                               <---------ARR11(3)<---------MYB46(3)      <---------bZIP60(1) ------LBD16                               --------->AGP1  <---------At4g35610       <---------TGA1a -------->At5g28300 <-------GAMYB          <---------AGP1<------ZmHOX2a(1)           <---------O2 ----->ZAT14       <---------MYB46(3)     <---------CCA1(2)--------->At4g35610     <---------ALFIN1   gcggtaagaaagctactctcgtcgttggaaatgttctccctcttagatctattcctgaaggagctgttgtctgcaacgtcgagcatcacgtcggtgatcg  7844600                           <---------ANAC55(2)                           --------->ANAC58               --------->GLK1(2)                          ----------->RAV1(1)      --------->ANAC46     --------->ANAC55(2)          --------->At4g35610     ------>ZmHOX2a(1)     --------->ANAC46          ---------->DOF2                          ------- <---------ZAT18      <---------MYB46(3)             <<<<<<<GRF7                              ------- ===========HOX2a_HOX2a    --------->ANAC58  --------->MYB46(3)    <---------TOE1(2)      --------->GLK1(2) >ZmHOX2a(2)  ----------------------->TaNAC69(2)    <-----------HVH21                     <---------ARR11(3) ->HVH21    <---------ARR11(3)     <---------YAB1  ----------->HVH21    --------->MYB52(2)--------->ARR11(3)   tggtgtcctcgctagagcttctggtgattacgccattgttatcgctcacaaccctgacagcgacactactaggtttgtttctcttatccaaaaatcttct  7844700  Previous    Next  AGI:  At2g18020.1    Description:  EMB2296 (EMBRYO DEFECTIVE 2296); structural constituent of ribosome. Identical to 60S ribosomal protein L8-1 (RPL8A) [Arabidopsis Thaliana] (GB:P46286;GB:Q9SL44); similar to 60S ribosomal protein L8 (RPL8C) [Arabidopsis thaliana] (TAIR:AT4G36130.1); similar to unknown [Populus trichocarpa] (GB:ABK93898.1); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain Ribosomal protein L2, domain 3 (InterPro:IPR014726); contains InterPro domain Ribosomal protein L2; (InterPro:IPR002171); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-bin Range:  from: 7844184    to: 7845386    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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