Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <----------DOF2                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)                                                           <---------AGP1         --------->WRKY18(1)                               --------->AGP1        <--------ZAP1                                      <---------ARR11(3)        <-----------HVH21                                  --------->ARR11(3)    --------->TOE2(2)                                     <---------CCA1(2)    <---------LBD16                                      ----------->ARR10   ----------->RAV1(2)               ----------->GT1  <---------AtLEC2                        -------   <---------ANAC46  --------->ARR14(2)             --------->AtLEC2                        <-------- -------->DOF5.7(2)  <---------GLK1(2)            <---------ANAC58            --------->ANAC58<------ ---------MYB52(1)   <---------ARR14(2)          <---------ICU4               --------->ANAC58<------ ---->GLK1(2)   --------->MYB52(1)  --------->DAG2<---------ANAC58      ---------->DOF2<-----------HVH21   tcgttacctgggtcaagagaacggattcgattggagagaaggtgattacaatccttgcatagatctttagataaaaaaggaagccaattcgtcagaaact  7828300                      <---------ANAC46                     <---------At4g35610                     <---------ZAT2                    ------>NtERF2                   <---------DEAR3(1)                 ------>NtERF2                               --------->ANAC58                 <---------ATERF1(1)                         --------->ANAC58                  <-----       ------>ZmHOX2a(2)      --------->MYB52(1)            <-------TEIL   <---------------AGL15      <------ZmHOX2a(2) <------MYB46(1)                    --------->ARR14(1)        <---------ZAT18     --------->ARR11(3) <------MYB83                       --------->CCA1(2)  <---------ARR11(1)     <---------ARR11(3)<---------MYB46(3)    ------>ZmHOX2a(2)            ----------------->AGL3 -->HSFC1(2)    --------->DEAR3(1)<------NtERF2           --------->ARR11(1)  <---------ARR14(2) -GLK1(2)   --------->At4g35610 <---------ANAC46          <---------ARR14(2)  --------->ARR14(2) ---HSFB2a(1)   ----------->HVH21--------->LBD16          --------->ARR14(2)  --------->GLK1(2)------ ---HSFC1(2)<---------At4g35610<---------LBD16          ----------->ARR10 ----------------->AGL2   ccgaagcgatcttaagctccgacggctggtactgccggagaaatggatcgttttccatgagatacgctcgatacaatccaaatctagtactcttgttaca  7828400                                                                   --------->ZAT14                                                                   <-------TEIL                                                                   <---------ZAT18                                                            ----------->TGA1                       --                                                       *TSS ----------->HVH21                ------>MYB83                                                      <---------ARR14(2)                     ------>MYB46(1)                 <---------WRKY38(1)             --------->ALFIN1  <---------ZAT14         <---------MYB59             ------>ZmHOX2a(1)          <----------DOF2--------->GLK1(2)                <-----------GT1 ----HSFB2a(2)   <---------ZAT18    <---------ZAT18   <---------GLK1(2)             <---------ZAT6 -- --->HSFB2a(2)   --------->ZAT18--------------->AtSPL8--------->ARR14(2)----------->GT1 <<<<<<<<<GT-1   gaaaattcaaatttcctagtccacgatttgaaatctagtactcttttgtcagtgtggattctgtgacggtacacttgtaaattctagtattaaccaaaca  7828500                                                                                          -----------                                                                                     <---------ETT(2)                                                                                ----------->RAV1(2)                                                                                <---------At4g35610                                                                                <---------O2                                                                                --------->O2                                                                                --------->TGA1a                                                                                --------->ZAT2                                                                                <---------ZAT2                               --------->ARR11(3)                               --------->At4g35610                          --------->AHL20(2)                                   ------>NtERF2 --------                       --------->WOX13(1)                                     --------->DEAR3(1) ----                     ------------>CBF                                         <---------ALFIN1<------                     ----------------->AGL3                                --------->ANAC46  --------         <---------MYB52(1)---------->DOF2             ===================================bZIP_DOF <-    <XXXXXXXXXXXXXXXXXXXXMIR868<---------ARR11(3)  --------->TOE2(3)       --------->ANAC58 --------- ------->YAB1    <---------At4g35610    ----------->GT1---------->DOF2     --------->ANAC58 <-------- --------->GT1   --------->At4g35610    <---------ANAC46        --------->AHL20(2) <-----------HVH21   agggtaatatcggtatttaagcagccaattaaagctcttgggccgtttaaaattcttaaaagcccattaatttcgaaacgccacctgtcgagacataatt  7828600       <---------ARR11(3)       <---------ARR14(2)   <---------At4g35610 <-----------RAV1(2) <---------WRKY12 ------>AGL1          --------->At4g35610 ->ATHB51    <---------At5g28300                                                 --------->GLK1(2) ----->MYB59<-----------GT1                                          <---------ICU4            ------ ------CBF  --------->MYB52(1)                                       --------->YAB1--------->TOE2(3) ->ATHB12 <---------AHL20(2)                                        <---------YAB1 --------->TOE1(3) ----------HVH21 --------->ALFIN1                                  *TSS          -------------------- >ICU4 --------->ARR14(2)             <----------DOF2             --------->YAB1 <---------ARR11(3) -YAB1<------ZmHOX2a(1)           <---------CCA1(2)        --------->TOE2(3)     --------->ARR11(3)   gggtcagaggattttaacggtggaagatgaagaagcttatctttttgcaaaatcgtttcttccttcattcatcatagcttcaaaatcttaaaaacaacaa  7828700                                                            --------->TOE2(3)                                                           <<<<<<<<<ARR2                       --------->At4g35610                 <<<<<<<<<ARR1                       <---------At4g35610            ----------->RAV1(1)                 <----------DOF2                   --------->ANAC58      ---------->DOF2<-----------GT1               --------->ANAC58 ----->RAV1(1)   <---------DAG2             --------->WOX13(1)                                    --- ---->ANAC81  <---------ALFIN1            <---------YAB1--------->MYB46(3)                     ------   caaaaatgaaaagtctccactttttagctcccaattcaacgattatcaatctgaagcaacaatcttatacaaaaaccaagttccagttgcatcgtagcaa  7828800                                                                                                <----                                                                        ----------->GT1         -----                                                                       --------->ALFIN1        ------                                                                     <---------ANAC58        <-------                                                                     <---------ANAC58        --------                                   <------NtERF2                     <---------ANAC46        --------                                 <---------DREB2C(2)            <---------AtLEC2             --------                                 <---------ANAC46              <---------MYB46(3)           <------ZmHOX2a(1)   <---------ARR11(3)            <---------DEAR3(1)            --------->MYB55(2)     ---------->DOF2   --------->ARR11(3)           <---------ABI4(1)            <---------MYB52(1)    <-------TEIL====== ---->GAMYB                   --------->ALFIN1             <---------MYB46(3)     --------->CCA1(2) ----->RAV1(1)       <---------ANAC46                    <---------At4g35610 --------->CCA1(2)<------ZmHOX2a(2)   cagaagaactctatcgataaactgcgtaaacagtggcggtgatgaagagaagattactcagccgttggatggagtggagataagattcaaaagaggatcc  7828900                                     <------ZmHOX2a(1) -----HSFB2a(2)                     <----------ID1 ---->HSFB2a(2)                 --------->ALFIN1 >ZmHOX2a(2)                   <------ZmHOX2a(1) --ARR14(2)              <------ZmHOX2a(1)                                           ----------->HVH21 ->ARR11(3)             --------->LBD16 ---------->DOF2                            --------->At4g35610 ->ARR14(2)           <-----------RAV1(2)                             --------->ANAC58 ->GLK1(2)           <-------TEIL <------ZmHOX2a(1)   ---------->DOF2 --------->ANAC58          ----- ===============================HOX2a_HOX2a      ----------->GT1    ---------->DOF2--------->CCA1(2)   agaaggaaaatgagggaagagggttcaggagaaggaggaggacaaagcgggaagaaaaaagagactgttcaaaagccatgggaagagatgacattgaatg  7829000                                                                                          <------MYB46(1)                                                                 <------NtERF2            <------MYB83                                                             <---------ANAC58  --------->ATHB12                                                             <---------ANAC55(2)        <--------P                                                             --------->ANAC55(2)       <-------GAMYB<                                  <-------GAMYB              <---------ANAC58 <---------YAB1       <-                <-----------RAV1(1)---------->ID1         <---------SPL7<-------TEIL  <---------MYB46(3)            <----------DOF2      <---------MYB46(3)      <---------ANAC58    <-----------HVH21    <-- ---->YAB1  <---------DAG2       --------->MYB52(2)      <---------ANAC58>>>>>>>>>EIN3--------->MYB55(2)   agaaggcattggagctttatgttggagagaaaggtttgttgttttggctaaacaaattggcttacgcgtcgatatacattgtcattggaggttggatttt  7829100       <-------GAMYB      --------->MYB52(2)      <---------MYB46(3)      --------->MYB55(2)      <-----------RAV1(1)      --------->MYB111(2)    <---------MYB52(1)                                  --------->TOE1(2)   <---------MYB52(1)                                  ------>ZmHOX2a(2) ----------->GT1  --------->LBD16         <----------DOF2    --------->ABI4(1)       ---------->DOF2        <-------- ---------LBD16          <---------ICU4      ------>NtERF2      --------->ARR11(3)          --------- ----------GT1   <---------ANAC46           --------->DEAR3(1)  <---------ARR11(3)    <----------DOF2 ---------GT1--------->DEAR3(2)          <---------ALFIN1------>ZmHOX2a(1)    <---------TOE2(3)   tttccggtttgttggaccggcgtttaatctttatcaactcgatacaccgcctcttgatcctaagaacatcttaaagggttaagaaatgctttgtagctgt  7829200  Previous    Next  AGI:  At2g17970.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G36090.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO48224.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 7826022    to: 7828455    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g17972.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO48225.1) Range:  from: 7828667    to: 7829412    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g17975.1    Description:  zinc finger (Ran-binding) family protein. similar to zinc finger (Ran-binding) family protein [Arabidopsis thaliana] (TAIR:AT5G25490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48226.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) Range:  from: 7829156    to: 7831087    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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