Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                           --------->At4g35610         <---------ANAC58                         --------->TOE1(3)        <---------At4g35610         <---------ANAC58                      ------>MYB83     --------->TOE1(3)           ---------    --------------->AtSPL8         ---------->ID1 --------->TOE2(3) <---------YAB1      --------->YAB1    --------------->AtSPL3   ------>ZmHOX2a(1) ------>MYB46(1)  --------->TOE2(3)      <---------ATHB12 --------AGL15            ------>NtERF2      <---------MYB59 <-----------GT1         --------->WOX13(1) --GT1  ------->TEIL     --------->DEAR3(1)  <---------MYB46(2) <---------DAG2    --------->TOE2(3) -   tttagaaacgtacttgctactctctcgcctcctatttgttccaattaccaaaccctaattttgtaaccttatcatttagcagaacatcaatcaaaaaagc  7828100                      <---------ARR14(2)                      --------->ARR14(2)                      --------->GLK1(2)                      --------->ARR11(3)                      <---------ARR11(3)            --------->YAB1            <---------ICU4           <---------ATHB51                                                                         -   <---------------AtSPL8                                                                           < ->DAG2    --------->ICU4             --------->ANAC46                                          ----- ->DOF2    <---------ATHB12   <----------DOF2     <---------ARR11(3)                   --------->DAG2 -------->GLK1(2)     <-----------ARR10  <---------GLK1(2)       ---------->DOF2      ---------->DOF2   agaatcaagtacaataatgaagaaaatctccgctttctatacagaatttcaatatccatagaaaccagaaagtctctcgcctctaagaaaaagttgagaa  7828200                                                              <----------DOF2                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)                                                           --------->AGP1         --------->WRKY18(1)                               --------->ARR11(3)        <--------ZAP1                                      <---------ARR11(3)        <-----------HVH21                                  <---------AGP1    <---------LBD16                                       <---------CCA1(2)    --------->TOE2(2)                                    ----------->ARR10   <---------ANAC46  <---------ARR14(2)               <---------AtLEC2                        <------   ----------->RAV1(2)               ----------->GT1--------->AtLEC2                        <-------- -------->DOF5.7(2)  <---------GLK1(2)            <---------ANAC58            --------->ANAC58------- ---------MYB52(1)   --------->ARR14(2)          <---------ICU4               --------->ANAC58<------ ---->GLK1(2)   --------->MYB52(1)  --------->DAG2<---------ANAC58      ---------->DOF2<-----------HVH21   tcgttacctgggtcaagagaacggattcgattggagagaaggtgattacaatccttgcatagatctttagataaaaaaggaagccaattcgtcagaaact  7828300                      <---------ANAC46                     <---------At4g35610                     <---------ZAT2                    ------>NtERF2                   <---------DEAR3(1)                 ------>NtERF2                               --------->ANAC58                 <---------ATERF1(1)                         --------->ANAC58                  <-----       ------>ZmHOX2a(2)      --------->MYB52(1)            <-------TEIL   <---------------AGL15      <------ZmHOX2a(2) <------MYB83                       --------->ARR14(1)        <---------ZAT18     --------->ARR11(3) <------MYB46(1)                    --------->CCA1(2)  <---------ARR11(1)     <---------ARR11(3)<---------MYB46(3)    ------>ZmHOX2a(2)            ----------------->AGL3 ---HSFC1(2)    ----------->HVH21--------->LBD16          --------->ARR11(1)  <---------ARR14(2) -GLK1(2)   <---------At4g35610 <---------ANAC46          --------->ARR14(2)  --------->GLK1(2)------ -->HSFC1(2)--------->At4g35610<---------LBD16            <---------ARR14(2)  --------->ARR14(2) ---HSFB2a(1)   --------->DEAR3(1)<------NtERF2         ----------->ARR10 ----------------->AGL2   ccgaagcgatcttaagctccgacggctggtactgccggagaaatggatcgttttccatgagatacgctcgatacaatccaaatctagtactcttgttaca  7828400                                                                   <---------ZAT14                                                                   <-------TEIL                                                                   <---------ZAT18                                                            ----------->HVH21                      --                                                       *TSS ----------->TGA1                 ------>MYB83                                                      --------->ARR14(2)                     ------>MYB46(1)                 <---------ZAT18                 --------->ALFIN1  --------->ZAT14         <---------MYB59             ------>ZmHOX2a(1)          <----------DOF2--------->GLK1(2)                <-----------GT1 ----HSFB2a(2)   <---------WRKY38(1)<---------ZAT18   <---------GLK1(2)             <---------ZAT6 -- --->HSFB2a(2)   --------->ZAT18--------------->AtSPL8<---------ARR14(2)----------->GT1 <<<<<<<<<GT-1   gaaaattcaaatttcctagtccacgatttgaaatctagtactcttttgtcagtgtggattctgtgacggtacacttgtaaattctagtattaaccaaaca  7828500                                                                                          -----------                                                                                     <---------ETT(2)                                                                                --------->TGA1a                                                                                --------->At4g35610                                                                                ----------->RAV1(2)                                                                                <---------O2                                                                                <---------At4g35610                                                                                <---------ZAT2                                                                                --------->ZAT2                               --------->ARR11(3)                               --------->O2                          --------->AHL20(2)                                   ------>NtERF2 --------                       --------->WOX13(1)                                     <---------ALFIN1<------                     ------------>CBF                                         --------->DEAR3(1) ----                     ----------------->AGL3                                --------->ANAC58  --------         <---------MYB52(1)---------->DOF2             ---------->DOF2     --------->ANAC58 <--------    <XXXXXXXXXXXXXXXXXXXXMIR868<---------ARR11(3)  --------->TOE2(3)       --------->ANAC46 --------- --------->GT1   --------->At4g35610    ----------->GT1===================================bZIP_DOF <- ------->YAB1    <---------At4g35610    <---------ANAC46        --------->AHL20(2) <-----------HVH21   agggtaatatcggtatttaagcagccaattaaagctcttgggccgtttaaaattcttaaaagcccattaatttcgaaacgccacctgtcgagacataatt  7828600       <---------ARR14(2)       --------->ARR14(2)   <---------At4g35610 <-----------RAV1(2) <---------WRKY12 ------>AGL1          --------->At4g35610 ->ATHB51    <---------At5g28300                                                 <---------ARR11(3) ------CBF  --------->MYB52(1)                                       --------->YAB1            ------ ----->MYB59<-----------GT1                                          <---------ICU4--------->TOE2(3) ->ATHB12 <---------AHL20(2)                                        <---------YAB1 --------->TOE1(3) -YAB1 <---------ARR11(3)                                          *TSS          -------------------- >ICU4<------ZmHOX2a(1)               <----------DOF2             --------->YAB1 --------->GLK1(2) ----------HVH21 --------->ALFIN1 <---------CCA1(2)        --------->TOE2(3)     --------->ARR11(3)   gggtcagaggattttaacggtggaagatgaagaagcttatctttttgcaaaatcgtttcttccttcattcatcatagcttcaaaatcttaaaaacaacaa  7828700                                                            --------->TOE2(3)                                                           <<<<<<<<<ARR2                       <---------At4g35610                 <<<<<<<<<ARR1                       --------->At4g35610            ----------->RAV1(1)                 <---------DAG2                    --------->ANAC58      ---------->DOF2<-----------GT1               --------->ANAC58 ----->RAV1(1)   <----------DOF2            --------->WOX13(1)                                    --- ---->ANAC81  <---------ALFIN1            <---------YAB1--------->MYB46(3)                     ------   caaaaatgaaaagtctccactttttagctcccaattcaacgattatcaatctgaagcaacaatcttatacaaaaaccaagttccagttgcatcgtagcaa  7828800                                                                                                <----                                                                        ----------->GT1         -----                                                                       --------->ALFIN1        ======                                                                     <---------ANAC46        --------                                                                     <---------ANAC58        --------                                   <------NtERF2                     <---------ANAC58        --------                                 <---------DEAR3(1)             <---------AtLEC2             <-------                                 <---------DREB2C(2)           --------->MYB55(2)           <------ZmHOX2a(1)   <---------ARR11(3)            <---------ANAC46              <---------MYB46(3)     ---------->DOF2   --------->ARR11(3)           <---------ABI4(1)            <---------MYB52(1)    <-------TEIL------ ---->GAMYB                   --------->ALFIN1             <---------MYB46(3)     --------->CCA1(2) ----->RAV1(1)       <---------ANAC46                    <---------At4g35610 --------->CCA1(2)<------ZmHOX2a(2)   cagaagaactctatcgataaactgcgtaaacagtggcggtgatgaagagaagattactcagccgttggatggagtggagataagattcaaaagaggatcc  7828900                                     <------ZmHOX2a(1) -----HSFB2a(2)                     <----------ID1 ---->HSFB2a(2)                 --------->ALFIN1 ===============================HOX2a_HOX2a ->ARR11(3)                    <------ZmHOX2a(1)                                     ----------->HVH21 ->ARR14(2)              <------ZmHOX2a(1)                                         --------->At4g35610 ->GLK1(2)              --------->LBD16 ---------->DOF2               --------->ANAC58 --ARR14(2)           <-----------RAV1(2)        ----------->GT1    ---------->DOF2--------->CCA1(2) >ZmHOX2a(2)         <-------TEIL <------ZmHOX2a(1)   ---------->DOF2 --------->ANAC58          -----   agaaggaaaatgagggaagagggttcaggagaaggaggaggacaaagcgggaagaaaaaagagactgttcaaaagccatgggaagagatgacattgaatg  7829000  Previous    Next  AGI:  At2g17970.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G36090.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO48224.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 7826022    to: 7828455    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g17972.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO48225.1) Range:  from: 7828667    to: 7829412    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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