Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <--------ATHB1                 --------->YAB1                                   <---------ICU4           <---------WOX13(1)             --------->YAB1        --------->YAB1         --------->ATHB12                          <             --------->TOE1(3)     --------->ATHB12      --------->ICU4                     ------>ZmHOX2a(2)             --------->TOE2(3)    --------->ICU4         <---------YAB1          ---------->ID1     <           --------->GLK1(2)      <---------ATHB12     --------->YAB1  <---------YAB1     <---------ARR11(3)          <---------GLK1(2)       <---------YAB1      --------->ICU4 --------->YAB1<----------DOF2 --  --------->GLK1(2) --------->AHL20(2)            --------->At4g35610<---------ICU4<---------DAG2----  <---------ARR11(3)--------->AHL20(1)           ----------->GT1 <-------TEIL--------------------->WRI1  --------->ARR14(2)<---------AHL20(2)     ---------->DOF2-------->HAHB4--------->YAB1    --------->ARR11(3)   ccaaaatctgaagaatcttaaataaaataaaactcaatgattagaaaaagacagcaaaaatgattgattcatcatcataccttggccttatcgatcttct  7779300             --------->MYB52(1)           <------ZmHOX2a(2)          <-----------HVH21     <------NtERF2    ----------->RAV1(1)    ------>NtERF2   ----------->HVH21   --------->DEAR3(1)  <------NtERF2  --------->RAP2.3(1)                                                                            <--- ------>NtERF2                                                                                   ---- <---------ATERF1(1)                                                          <---------ATHB12   ---- <---------RAP2.3(1)                              ------>MYB83   --------->ANAC58       --------->At5g28300 ---------DEAR3(1)                                ------>MYB46(1)--------->ANAC46   --------->MYB52(1) ---------RAP2.3(3)                             <---------MYB59  --------->AtLEC2  ----------->HVH21 ------->RAP2.6(3)                ----------->RAV1(1) <-----------GT1    <<<<<<<<<<<<<<<<<LFY-------- ------->HVH21   <---------MYB52(1)          <-----------GT1     --------->ANAC58<---------REM1(1)  <   tgacggcgacacgatcaccggtttttttatcggtagcgacatatgtataaccaaattgaccatgtccaagcaattttccaatggtgtaacggtgatcaaa  7779400                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                 <---                   <---------REM1(2)                                                             <---         --------->ANAC58                                                                        <---         --------->ANAC58                                                                        <---        ------->TEIL                                                                            <----      <---------ZAT18          --------->STY1(1)                                               ------      <---------SPL7<---------ALFIN1                                                           <-----     <---------ANAC58 --------->ANAC58                                                         <-----     <---------ANAC58 --------->ANAC58                             <---------ANAC58            ------    --------------->AtSPL3     <---------STY1(1)                   <---------ANAC46           -------    <---------------AtSPL8    <---------SPL7                 <---------MYB52(1)              <-------    --------------->AtSPL8 <---------At5g28300              <-------GAMYB                   <-------- ------ARR11(3)<-----------ARR10                         -------->P<---------ANAC58    ============== ----->GLK1(2) --------->ARR11(3)      ========================HOX2a_HOX2a             <----------DOF2 ----->ARR11(3)<---------ARR11(3)    <---------ARR14(2)  ------>MYB46(1)   <----------DOF2  <-------- ->YAB1 --------->SPL7--------->ANAC46 ------>ZmHOX2a(2) ------>MYB83   <-----------GT1<---------DAG2 ----------DOF2--------->GLK1(2)     --------->ARR14(2) ------>ZmHOX2a(1)  ==========================   atctttagcgtacccaaaatctacacgcttaccgtaggggatcgtttctccatgtctcctaccgttattgcttataactttctctctcactttcccgtgc  7779500            <---------ATERF1(1)           --------->bZIP60(2)           ============================================MYC_MYB           ===========================================MYC_MYB           <---------TGA1a           <---------O2     --------->SPL7   <---------SPL7  <---------ANAC58  <---------ANAC55(1)  <---------ANAC46  <---------ANAC58 <------NtERF2 ----->NtERF2 ------->ALFIN1<---------RAP2.3(1) --------DEAR3(1) ------>ATERF1(1) ------ANAC58  ------>NtERF2 ------bZIP60(2)<------NtERF2                     <---------ANAC58 ------ANAC58<------NtERF2                    <-------GAMYB ------ANAC46--------->ATERF1(1)             <---------MYB46(3) -----DEAR3(1)<---------DEAR3(1)            <------NtERF2 --->SPL7  --------->O2                     <---------ANAC46   ===============HOX2a_HOX2a ----ZAT14 --------->TGA1a                ------------>AtMYB77 ------>ZmHOX2a(1) ----ABI4(1)<-----------HVH21            --------->ATERF1(1)   <----------DOF2 --->ZAT14------>NtERF2                 <-----------HVH21    ------>ZmHOX2a(2) -->ALFIN1--------->LBD16              <---------ANAC58    <---------ARR11(3)                       < --SPL7  <---------ANAC46              <---------ANAC58    --------->ARR11(3)------->GAMYB         -- -ANAC58 <---------ANAC58              <---------ANAC46   --------->YAB1    --------->MYB46(3)    <-- ====================bZIP_DOF     <---------AtLEC2<---------ANAC58         --------->RAP2.6(3)   <--- -ANAC58 <---------ANAC58      <---------MYB52(1) <---------ANAC46        --------->MYB52(1)     ---- ====================bZIP_DOF<---------MYB46(3)<---------MYB52(1)      ------>ZmHOX2a(2)        <----   ggtggcgtatgccgcgtcggcgttttcttagccgttgcattgcgtcgcggttgcgttctatgatccttttggatcgtaacggccatgaaggaacatggag  7779600                                                                                         <------ZmHOX2a(1)                                                                                      --------->ATERF1(1)                                                                                   --------->At4g35610                                                                                   <---------ABI4(1)                                                                                   <---------At4g35610                                                                                   <---------LBD16                                                                                  ------>NtERF2                                                                                  <---------ORA47(2)                                                                                  <---------RAP2.3(1)                                                                                  <---------ATERF1(1)                                                                                  <---------ERF1                                                                                  <---------RAP2.6(1)                                                                                 <---------RAP2.6(2)                                                                                 <---------RAP2.3(2)                                                   --------->LBD16               <---------RAP2.3(3)                                                  <---------ANAC46               --------->ATERF1(2)                                                 <---------LBD16                 <---------RRTF1(2)                                               --------->GLK1(2)                 <---------DREB2C(2)                                               <---------ARR14(2)                <---------RRTF1(3)                                              <---------GLK1(1)            --------->ARR14(2)                                              <---------ARR14(2)       <------NtERF2--------->ALFIN1                                              --------->GLK1(1)       --------->LBD16 <------NtERF2       <---------ANAC46                       --------->ARR14(2)    <---------ANAC46<---------ANAC46     <---------MYB46(3)                    <------NtERF2       <-----------RAV1(1)<---------RRTF1(1)    --------->ALFIN1                   <---------ANAC58        <---------MYB46(3)<---------ATERF1(2)    <---------AtMYB61                  <---------ANAC58        --------->ALFIN1  <---------ANAC46 <---------DEAR3(1)                   <---------MYB46(3)      --------->ALFIN1   <---------DEAR3(1) ---------LBD16               <------ZmHOX2a(1)--------->ARR14(2)   <---------LBD16--------->ATERF1(1) ---->ZmHOX2a(2)       <-----------HVH21 --------->ALFIN1    <-------GAMYB <---------ARR14(2) ----ZmHOX2a(2)       ------->GAMYB--------->ALFIN1------>NtERF2 <---------RAP2.6(2)<---------DEAR3(1) ------ARR14(2)    ------->GAMYB  <---------ARR14(2)        <---------MYB46(3)  <---------LBD16 ----->ARR11(3)   --------->MYB46(3) --------->ALFIN1     <---------LBD16 <------ZmHOX2a(1) -----GLK1(1)   <-----------GT1  <------ZmHOX2a(1)<---------RAP2.6(2) <------NtERF2<------NtERF2   --   atcgcggtggtctggatttaacaaccgtgagaggaggatgtgggtggggattccggctactgcggttgtggccggaggatttggcggcggaggagaaaca  7779700                                                   <------ZmHOX2a(1)                                                 <---------TOE2(3)                                                --------->YAB1                                           ------------>CBF                                          --------->ANAC58                                          --------->ANAC46                        <---------TOE2(3)                               <---------ANAC46<---------ATHB12                  --------->YAB1                            <---------MYB52(1) --------->ICU4                   --------->ICU4                      --------->GLK1(1)   --------->ANAC58          <---------GLK1(1)              <-               <-----------RAV1(1)       --------->SPL7            --------->ARR14(2)           <---- ------->GLK1(1)      <---------GLK1(1)<---------SPL7              <---------ARR14(2)     <------ZmHOX2a(1)   gagacccatgagtttttttgtgggatttcggtttcttagaccctacgcaatgaggatgttttcttaggggatttgtgaggcattaatgaataggaaatga  7779800                                                         --------->HSFB2a(1)                                                         --------->HSFC1(2)                                                         <---------HSFC1(2)                                                    <------ZmHOX2a(1)                                          --------->CCA1(2)                                         <---------ARR14(2)              <---------ANAC46                                         --------->ARR11(1)           <---------MYB52(1)                                         --------->ARR14(2)     --------->CCA1(2)            <-------                                         --------->ARR11(3)     <---------GLK1(1)       <----------DOF2 -------P                 xxxxxxxxxxxxxxxx>smallRNA(s)   <---------HSFB2a(1)  --------->ANAC58  ----- -----TOE2(3)  <------------CBF          <---------ARR11(3)  ----------->ARR10--------->ANAC58<------   ggttgccatcgaaacagcattgccagagggagggagagagagagatatggagaaggagaagcttcgatatgcgttgtgtcaagaaatagacttttctcgg  7779900                                                --------->ALFIN1                                                <---------REM1(1)                                              <---------ANAC46                                              <---------ANAC58                                     --                                              <---------ANAC58                                     --                                        <----------DOF2              <---------TOE2(3)             <-                                     <-----------GT1                 <---------TOE1(3)            <--                                <---------AHL20(2)                  <-----------RAV1(2)       <------    <----------DOF2             <---------AHL20(1)             <---------GLK1(2)          <---------AHL20(2)    <---------DAG2              --------->AHL20(1)         ---------->DOF2                --------->AHL20(2) --LBD16                        --------->AHL20(2)        --------->AHL20(2)             --------->AHL20(2) ------>GT1                    --------->AHL20(2)         <---------AHL20(2)---------->DOF2   ------- ---LBD16       <-----------GT1<---------AHL20(2)    <------ZmHOX2a(1)----------->GT1    <---------AHL20(2)   gtgaaacttttttttttttttccattttgcaaaataaattttctttttgggtgtaggaaattaaagaatttcaggttataaagtatttgaataaaattat  7780000     <---------YAB1 <------------CBF                                                           --------->ANAC58 ------->AHL20(1)                           --------->ALFIN1         ----------->GT1 ------->ARR11(3)                        --------->DAG2        --------->ANAC58 --------AHL20(1)                       ---------->DOF2        --------->ANAC46 -------AHL20(2)                   <---------TOE2(3)           --------->ANAC58  <---------GLK1(2) ---AHL20(2)                    <---------YAB1  <------ZmHOX2a(2)--------->AHL20(2) -->AHL20(2)                    <---------WOX13(1)       --------->GLK1(1)  --------->ANAC58     <---   atatattgtgcttagatgagaaattttaaaactgattaatgaaaaagtggatcatccaaatatccaagtaaatgtaacaagcagattatttgataacaat  7780100                                                                      --------->ATHB12                                                                    <---------TOE2(3)                                                                    <---------TOE1(3)                                                                 --------->DOF5.7(2)               <-                                                                <-------GAMYB                      <-                                                               <------MYB83                       <--                                                               <------MYB46(1)                    <--                     --------->At4g35610                       <---------MYB46(3)                 <--           <---------YAB1                              <---------YAB1<---------YAB1              <---          <---------AHL20(1)                          --------->AHL20(1)                         <---          --------->AHL20(1)                          <---------AHL20(1) <---------MYB46(3)<---------YAB1     <---------AHL20(2)                          --------->AHL20(2)<---------DOF5.7(2)--------->ARR11(3)     --------->AHL20(2)  <---------GLK1(2)       <---------AHL20(2)--------->MYB52(1) <---------ARR11(3) ------ARR11(3)      <---------At4g35610 <---------ARR11(3)<-----------RAV1(1)      xxxxxxxxxxxxxxxx>smallRNA(i)   atgtttttttaatatttttgttgagcagattatttgataacaatatgtttttttaatatttttgttggttaacgattgttgaagttgatatctatgaatg  7780200  Previous    Next  AGI:  At2g17890.1    Description:  CPK16 (calcium-dependent protein kinase 16); calmodulin-dependent protein kinase. similar to CPK18 (calcium-dependent protein kinase 18), calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT4G36070.1); similar to CPK28 (calcium-dependent protein kinase 28), calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G66210.2); similar to CPK28 (calcium-dependent protein kinase 28), calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G66210.1); similar to calcium-dependent protein kinase CPK4 [Nicotiana tabacum] (GB:AAL30819.1); similar to calcium-dependent protein kinase CDPK1444 [Medicago truncatula] (G Range:  from: 7776967    to: 7779709    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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