Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ----------->GT1      ------>ZmHOX2a(2)                                                       <------MYB83     --------->CCA1(2)                                                        <------MYB46(1)     <------ZmHOX2a(2)                                                        <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------ARR14(2)                                                       <---------AtMYB61    --------->ARR14(2)                                                       --------->MYB59    --------->AGP1                                                   --------->ATHB12    <---------ARR11(3)                                              <---------YAB1       --------->At4g35610    <---------AGP1                     <------ZmHOX2a(1)     <------ZmHOX2a(1)<---------MYB46(3)    --------->ARR11(3)              <---------ICU4           ==================HOX2a_HOX2a   --------->RVE1(1)     <----------DOF2                  <---------LBD16  <---------MYB52(1) --------->DOF2----------->GT1--------->ANAC55(2)      <-----------GT1  ------>ZmHOX2a(2)--------->CCA1(2)   aaaaaagatctagtgaattgaaatatactttcacatgatcaggacaagactatgttattaccaggatgagatgatcggtttggttacagagagatgaaac  7767500              <---------ZAT6              ----------->GT1             <---------TOE1(3)             <---------TOE2(3)       <---------ARR11(3)                                       <---------ARR11(3)        <---------ANAC58       --------->AHL20(2)           ----------->GT1--------->ANAC58                       <---------ANAC58     --------->ANAC58               <---------ANAC46 <------ZmHOX2a(1)          <---------ICU4     --------->ANAC46     <---------WRKY18(1)      --------->ANAC58          --------->YAB1     --------->ANAC58    ----------->HVH21 <-----------GT1      --------->ARR11(3)     <----------DOF2   atgtttcaagaaattagggttaatctcttgaccttgtggagtatataaccagtaaggaacattgaagacattttctgaatcaacatggcctttcttgaac  7767600                                                                                                 <---                                                                                          -----------                                                                                  ------->TEIL   <---                 <-----------GT1                  --------->At5g28300             --------->ARR14(2)          <---------ANAC46                       ----------->GT1                  <---------ARR14(2)        --------->ZAT14                    --------->At4g35610              <---------WRKY18(1)  <---        <---------ZAT14                  <-----------GT1            ---------->DOF2    ---------->DOF2       <---------ARR14(2)             --------->GLK1(1)          --------->YAB1   --------->GLK1(2)       --------->ARR14(2)             <---------GLK1(1)       ----------->RAV1(1)<---------GLK1(2)   tcttcaacagttctgtgtttaacagctcttaaaatttcagaaatcaccagacagtaatatcgaacaacaataaaggcatgactgaatctgaaaggtttta  7767700                      --------->REM1(2)                     <---------REM1(1)                     --------->ALFIN1              <------MYB46(1)         <---------bZIP60(1)                       <------MYB83         --------->bZIP60(1)                   <---------ZAT2        <<<<<<<GRF7 <-------MYC3               --------->ZAT2    ----------->RAV1(2)                  --------->GLK1(2)  <-----------GT1   ------->MYC3       --------->HSFC1(2) ------YAB1        <---------ANAC46    <---------HSFB2a(1)               <----------DOF2 >GT1 ----------->HVH21                <---------HSFC1(2)            --------->ICU4        <---------REM1(1) ------TOE1(3)--------->ANAC58         --------->HSFB2a(1)      --------->YAB1            <---------TOE2(3) ------TOE2(3)--------->ANAC58 --------->GLK1(2) --------------------->WRI1       ----------->HVH21   agattaacctgacatcaagaaacgtgtagccagaatcaagaagtttctgagcttggtttacatcgatggtaatgacttttggttctgacattgatgtagt  7767800                                                     --------->REM1(2)                                                   ------->MYC3                                                   ------->MYC2                                                   <-------MYC2                                                   <-------MYC3                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)              --------->AHL20(2)         <---------ARR14(2)           ----------->GT1               <---------ARR11(3)           --------->ATHB12              --------->ARR11(3)                               <---------GLK1(2)          <---------YAB1                 <---------AGP1---------->DOF2  <---------At4g35610          --------->ICU4  ---------->DOF2--------->ARR14(2)             --------->At4g35610        <---------At4g35610      >>>>>>>>>TBF1    <---------ANAC46  <-----------RAV1(1)--------->HSFB2a(2)     <------ZmHOX2a(1)  --------->YAB1  <------ZmHOX2a(1)   --------->GLK1(2)          <---------HSFB2a(2)   tgtgcgaggaagatgattaaaaacaatgaaaagaagaagaaaggatctaagaacgtgtaaagaatccattttgttgctgaattagttttctagagtctct  7767900                                      --------->AHL20(2)                  --------->AHL20(2)  <---------AHL20(2)                  <-----------TBP     <-----------TBP                <-----------TBP     <-----------TBP                <---------AHL20(2)  <---------AHL20(2)                --------->AHL20(2)<-----------TBP                                   --------->LBD16              --------->AHL20(2)  <---------AHL20(2)                                ------>NtERF2 ---              <---------AHL20(2)  --------->AHL20(2)                               --------->ANAC46              <-----------TBP   --------->AHL20(2)                   <---------AHL20(2)           ---       --------->YAB1           <-----------TBP  <---------ZAT18    <---------AHL20(1)            <--     --------->GLK1(2)          <---------AHL20(2)                  <---------AHL20(2)  <---------MYB52(1)    *TSS    <-----------TBP   <-----------TBP    --------->ZAT18    --------->AHL20(1) <-------GAMYB    --------->YAB1<---------AHL20(2)--------->AHL20(2)              --------->AHL20(2)<---------MYB46(3)   gaacaagaatcagtatatatatatatactagtatatatatatatatactagtagactagtagtagccaaatttattcgtattaatccgccgttggatttg  7768000                                                <-----------HVH21                                               --------->DEAR3(1)                                               <---------ATERF1(2)                                               --------->RAP2.3(3)                                               --------->ATERF1(2)                                              --------->ATERF1(1)                                              --------->RAP2.3(1)                                             --------->LBD16                                 <---------ANAC58                              <---------ARR14(2)------>NtERF2                              --------->ARR14(2)<---------SPL7                           <---------ANAC46 --------->ANAC46                        --------->ALFIN1   --------->MYB46(3)                        <---------AtMYB61--------->ARR14(2)                    <------NtERF2<---------O2------>NtERF2                    --------->ATERF1(1)  <---------ARR14(2)                   <---------ERF1--------->ANAC46    --------->ARR14(2)                   ------>NtERF2 <---------ANAC58<------NtERF2                   <---------RAP2.3(1)  <---------CCA1(2)                  <---------DEAR3(1)  <---------ANAC55(1)                  <---------ATERF1(2) <---------ANAC58                  <---------RAP2.3(3) <---------ANAC55(2)                          <---------YAB1                  <---------RAP2.6(2) <---------ANAC46                            <-----------GT1                  <---------RAP2.3(2) <---------ANAC58--------->ARR14(1)       <---------AHL20(2) ------>ZAT18     --------->ATERF1(2) --------->ANAC55(2)    -------->P   --------->AHL20(2) ------>ZAT14    --------->RAP2.6(3) <------NtERF2   <---------ARR14(2)   <---------AHL20(1) -------ZAT18    <---------LBD16 --------->ANAC55(2) <---------GLK1(2)    <---------AHL20(2)   agcactctgttttcattttggcggcagtggtgtatacgtggcgtatccgccgtcggattcgcttaccctgttgtattttatttttttcattgttttgttt  7768100                                                                                <<<<<<<<<EIN3                                                                        <---------AHL20(2)       <---                                                                        <XXXXXXXXXXXXXXXXXXXXMIR849                                                                      <---------YAB1         --------                   <---------WOX13(1)       <---------ANAC46         --------->AHL20(2)<---------AHL20(1)                 --------->ATHB12           <---------ANAC58     <---------AHL20(2)    <---------AHL20(2)              <---------At4g35610           <---------ANAC58    <---------AHL20(2)     --------->AHL20(1)           <-----------GT1                  <---------AtLEC2    --------->AHL20(1)     --------->AHL20(2)    <---------TOE2(3)                     <---------YAB1        <---------AHL20(1) <---------YAB1<--- <----------DOF2<---------YAB1     <---------MYB52(1)           --------->AHL20(2) <---------AHL20(2)   aaactttaggtttttacgctgattgaactcaaatgccgattgttttgcttgtaatgcgaaaactaatttaatattatatcaatgtataattaattagcta  7768200                                                                                                  <--                                                                                                  ---                                                                                             --------                                                                                             --------                                                                     <----------DOF2         <-------                                                                     --------------->AGL15   <-------                                                                     <---------DAG2         <--------        <---------At4g35610                                       <---------------AGL15 --------->AHL20(2)        --------->At4g35610                                       --------------->AGL15 <---------AHL20(2) <-------TEIL                     --------->AHL20(2)           <-----------GT1         --------->AHL20(2) ------TOE1(3)                 <----------DOF2                --------->AHL20(2)      <---------AHL20(2) ->At4g35610     --------->AHL20(2)                    ----------->GT1            <---------AHL20(2)< ------TOE2(3)   <---------AHL20(2)    --------->YAB1<----------DOF2 <---------------AGL15  ---------   aggtacatttagctgatatttaaattctaaatacttttaaatagtaatctatacactttgttaataaactacttttagtagtttttattttaaattaaat  7768300 -------AHL20(2)                                       <---------ARR11(3) ------>AHL20(2)                                       --------->ARR11(3)                   --------- ->AHL20(2)                                            --------->GLK1(2)                    <-------- ->AHL20(1)                                 <---------AHL20(2)                              --------- --AHL20(2)                             --------->AHL20(2)                       <-----------GT1 --AHL20(1)                --------->AHL20(2)   ----------->GT1              <---------AHL20(2) -AHL20(2)                 <---------AHL20(2)   --------->YAB1              --------->AHL20(2) -----------GT1     <-----------GT1     <---------AHL20(2)                  <---------AHL20(2) >AHL20(2)       <---------ICU4        --------->AHL20(2)               <---------AHL20(2)  <--------   tttaatcttacacatttcatttttactatataatttagctatttattttatcgtaaaaatctaaaattgagttttaaattttttttctattgaaaatatt  7768400  Previous    Next  AGI:  At2g17850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66170.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48196.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 7767087    to: 7767904    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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