Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->AHL20(2)                                              <---------TOE2(3)                                             <---------DOF5.7(2)                                             <-----------GT1                                             --------->MYB52(1)                                         <--------ATHB1                                         <--------HAHB4                                         --------->YAB1                                         <---------ICU4                                    <---------AHL20(2)                                         --------->ATHB51                                  --------->AHL20(2)       <---------ANAC58                 --------->ICU4                                     --------->AHL20(1)       <---------ANAC58                 <---------ATHB12                                   <---------AHL20(1) -----------HVH21                       --------->AHL20(2)                                --------->AHL20(2) ------GT1                              <---------ATHB51        --------->MYB52(1)        <---------AHL20(2)   catgtcattgcttaacttataacttaaattgttttgcatacaataattaacgattaaaaaaaaaaaaaacgattttagatttagttaacaaaataaattt  7765500                                             <---------ATHB12                                            ------>MYB46(1)                                            ------>MYB83                                          --------->AtMYB61                                          <---------MYB46(2)                                          <---------MYB111(1)                                          <---------MYB55(2)                                          --------->MYB46(3)                     --------->TOE2(3)    <---------MYB111(2)       --------->HSFB2a(2)       -------                     --------->YAB1    ------->GAMYB                <---------HSFB2a(2)    --------->ANAC55(2)                     --------->TOE1(3)--------->MYB46(3)            >>>>>>>ZML2   <---------ARR11(3)                   --------->GLK1(2)<-----------GT1   <---------TOE2(3)           --------->ARR11(3)         <---------YAB1    --------->YAB1--------->ANAC46        --------->ARR11(3)    <----------DOF2   taaacatgcttatatttggataatcttaatcagcaatataaccaccaaacatgtttgatgtttctaagttctagcagtcttgaagttctctttacatgat  7765600                                                <------MYB83                                 <-------                                                <------MYB46(1)                 ------>ZmHOX2a(1)                                                <---------MYB46(3)          <---------ARR11(3)                                              <---------WOX13(1)            --------->ARR11(3)                                  --------->AHL20(2)  --------->ANAC58      <---------ARR14(2)       ---------->DOF2           --------->AHL20(2)   --------->ANAC58      --------->ARR14(2)  ---------->DOF2            <---------YAB1  <------------CBF   --------->TOE2(3)            <------- ---->GT1<----------ID1--------->AHL20(2) <---------------------WRI1   ------------>CBF<---------YAB1   aaaaaaaagaaaagacaaaatcccattaattctcattaaaaaacttagattggttcaaggaaaaaacattaagaccaatatcctctgtttttattaaggt  7765700                           ------->GAMYB                          --------->MYB46(3)                          <---------MYB52(2)                        --------->MYB52(1)              --------->ANAC46            --------->ANAC58      ---------->DOF2                                        --------->YAB1 --TOE2(3)  --------->ANAC46   --------->TOE2(3)           <----------DOF2      --------->ARR14(2) --TOE1(3)  --------->ANAC58 ------->TEIL      --------->YAB1                   <---------ARR14(2)   tttaaaaaacacacacacaaaactagtaacgaacattaaagagtttctctgataacatgccctttctcaacttcatcaaacagttctgtattaatagctc  7765800                                     --------->YAB1                                     <---------ICU4                           <---------WOX13(1)                                     ---------->DOF2                      <---------WOX13(1)                                ------------>CBF                         <-------GAMYB                       --------->GLK1(2)                                <---------MYB46(3)              --------->At4g35610--------->ZAT6                         <------MYB83            <-----------GT1    --------->MYB52(1)                       <------MYB46(1)         <---------GLK1(1)   <---------MYB46(2)            ----------->GT1<--------P         --------->GLK1(1)   <---------MYB52(2)         ---------->DOF2--------->MYB59      --------->LBD16  <---------ARR11(3)     <---------At4g35610      <---------AtMYB61     <---------HSFC1(1)<-----------ARR10      --------->At4g35610 <---------TOE1(3)     <---------HSFB2a(2)     <---------MYB111(1) ------>NtERF2    <---------TOE2(3)     --------->HSFB2a(2) <---------MYB59      ----------->RAV1(2)---------->DOF2      <---------ATHB12   tcaaattccagaaatcaccagacagtatctaactaacaataaagactcccctgcctctaaaaggttttaaagtttggttgatagacaaatcagttacaga  7765900                     --------->AHL20(2)                  --------->TOE2(3)                                              ---------->DOF2                 --------->ANAC58                                               --------->AtMYB61                 --------->bZIP60(2)                                           --------->ANAC46                 --------->ANAC58                                       ------>ZmHOX2a(1)                 ----------->GT1                                    <---------ARR14(2)                 --------->O2                                       --------->ARR14(2)           <---------WOX13(1)            <----------ID1            --------->GLK1(1)        ---------          <------------CBF       <---------AtMYB61                 <---------CCA1(2)     --------->ANAC58         <<<<<<<<<RAP2.2    <---------ANAC58                       <---------GLK1(1)     --------->ANAC58        <---------YAB1      <---------ANAC58                      <---------KAN4(2)      --------->ANAC46        <---------TOE2(3)   <---------ANAC46      <----------DOF2 ---------->TaMYB80 ----------------   cttacagatttagattgccacgttaaaatgtcgttttggtttagagacaagtctttatatgttatgggcatatccttctccaccaaagaacacacaaaga  7766000                                                                                             <-------                          <---------ANAC58                                      --------->AHL20(2)                          <---------ANAC58                                      <---------AHL20(2)              <---------ICU4                    --------->ARR11(3)   --------->YAB1 --------->YAB1  <              --------->YAB1    <---------ARR11(3)            <---------At4g35610  <---------YAB1 <--             <---------ATHB12   --------->ARR11(3)            --------->At4g35610<-----------GT1 <--- ->DOF2      --------->ICU4   ----------->ARR10 <---------ARR11(3)   --------->AHL20(2)--------->ARR14(2) -------->ANAC81          <---------ANAC46     <---------CCA1(2)     <---------AHL20(2)<---------ARR14(2)   gaaacaacatgagtaatcatcaaactgtgcgtgagatacttcttctcttatatctcactgtgttagctcaattatatgaaaatttatcatatatgctttt  7766100                                                                                         <---------At4g35610                                                                                         --------->HSFC1(2)                                                                                         --------->HSFB2a(1)                                                                                         --------->At4g35610                                                                                         --------->ZAT2     <----------DOF2                                                                     <---------HSFC1(2)     --------->TOE2(3)                                                                 <------ZmHOX2a(1)   <---------YAB1                                       <---------ZAT18      <---------ANAC58 <---------ICU4                                         <---------ZAT14    <---------ARR14(2) --------->YAB1                         --------->At4g35610     <----------ID1   ----------->HVH21 ---DOF2                            --------->ANAC46    --------->ZAT18  <---------MYB46(3)    ====== ---------ATHB12                    --------->ANAC58 <---------ZAT6 ---------->DOF2 <-----------RAV1(2) ---------GT1                       --------->ANAC58 <---------ANAC46   --------->ALFIN1 <---------HSFB2a(1) ------AHL20(2)       ---------->DOF2   ----------->RAV1(2)   ---------->DOF2<---------ANAC58  ------   taatcatctttaatatgactctaacaaagcaggtattgaagcaactggagccatagtgtgaacttaaagacaaagtggttcttgtgacaggagcttcctc  7766200                                  --------->At4g35610                                  <---------At4g35610                                  --------->ZAT2                <---------ANAC58                                  <---------ZAT2          --------->At4g35610                               ---------->DOF2            <---------At4g35610                         ------>ZmHOX2a(2)                <---------ZAT2                       <---------ARR11(3)                 --------->ZAT2                           --                   <---------ANAC58                    --------->At4g35610               --------->ZAT14     ===========================HOX2a_HOX2a            <---------At4g35610               <---------ZAT14     <------ZmHOX2a(1) --------->ARR11(3)              --------->ZAT2    ------>ZmHOX2a(2)         <- ===============================HOX2a_HOX2a            <---------ZAT2--------->ETT(2)XXXXXXXXXXXXXXXX >ZmHOX2a(1)       <---------ANAC58           <---------GLK1(2) <---------ANAC58<---------CCA1(2) ---   tggtataggaagagaggtatgtcttgatctagccaaagctggctgtaagattatcgcagcagctcgtcgtgtcgatcgtctcaaatctctctgctctgaa  7766300                                                                      <------NtERF2                                                                     ------>NtERF2                                                                    <---------ALFIN1                                                                    --------->DEAR3(1)                                                                   <---------MYB55(2)                                                                   --------->MYB46(3)                                                                   --------->ATERF1(1)                                                                   <---------ABI4(2)                                                                  ------>NtERF2                  ----------->RAV1(2)                             --------->At4g35610                  <---------ZAT2                                  <---------At4g35610            <---------KAN4(1)                                     <---------ATERF1(1)           <---------ARR14(2)                                    --------->DEAR3(1)       ---------->DOF2           --------->ARR14(2)                                    --------->RAP2.3(3)    <---------TOE2(3)           <---------KAN4(2)  --------->At4g35610             --------->ANAC46     ----------->GT1 -------->DOF2    --------->ZAT2                              --------->ANAC58     <---------MYB46(3) --------AHL20(2) <---------At4g35610<---------ARR11(3)       --------->ANAC58  ------------>MYB.PH3(1) XXXX>MIR859--------->KAN4(1) <---------At4g35610        --------->At4g35610   --------->DAG2 <------ ------>AHL20(2)  --------->At4g35610--------->ARR11(3)  <---------At4g35610  ---------->DOF2 <------   ataaatcgcttcgaatattcagctggaattcaagctgaagctcttgagctagacgtttcatcagacgcagccaccgttcaaaaagcggttaagaaagctt  7766400  Previous    Next  AGI:  At2g17845.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G55290.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN64848.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18213.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 7765928    to: 7766963    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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