Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->AHL20(2)                                       ---------->DOF2        <---------AHL20(2)                                  <------MYB83               --------->AHL20(2)                                  <------MYB46(1)        <---------YAB1           <----------DOF2                                <--------P      <---------DEAR3(2)               <---------ANAC58            <------ZmHOX2a(2) <-----------RAV1(1) <---------MYB52(1)             <---------ANAC58 ---     <-----------RAV1(2)--------->GLK1(2)       <------MYB46(1)         ---------->DOF2           ---  --------->CCA1(2)    <---------GLK1(2)        <------MYB83<---------YAB1   <----------DOF2      <--   agagataccaggcgatcaaagtatagaatctcatgttggtcaaaagaagtcggtttgtttttattaaaaaaaaaaaaagctttgctttgagtcgtttgag  7746500                                                                                      <-------GAMYB                                 --------->ANAC58                                   <---------DEAR3(1)                                 --------->ANAC58                          --------->GLK1(1)                                --------->HSFB2a(2)                       <---------ARR14(2)                                <---------HSFB2a(2)                       --------->ARR14(2)                           <---------At4g35610                            <---------GLK1(2)     -----   ---------->DOF2      <---------ANAC46                               --------->TOE1(1)      <------ ------>GLK1(2)         <---------ANAC58             --------->MYB59  --------->LBD16<---------DEAR3(2) ------>ARR14(2)        <---------ANAC58       --------->LBD16        <---------LBD16<---------MYB46(3) -------ARR14(2)   <-----------RAV1(1)       <---------LBD16          ------>ZmHOX2a(1) <-------TEIL   aatcggaaagggactgatattgtgttgcttgctgctcgaaatgtaaacccgggtttaggtctagttttattcctcggattttcaaggcggttcatggtct  7746600                              --------->GLK1(2)                              ------->TEIL                              <---------ARR11(1)                              --------->ARR14(2)        <---------ANAC46      <---------ARR14(2)                <---------ANAC55(2) <---------ANAC58          --------->ANAC46                     --------->ANAC55(2)        --------->DAG2 <---------ANAC58        <-----------GT1                      <-----------GT1             ---------->DOF2 ------>GT1      <---------ANAC46                  <---------TOE2(3)                 --------->AtLEC2 ---ANAC46     <---------ANAC46  <----------DOF2   <---------YAB1                ------>ZmHOX2a(1)   gtaacttgtggagtttgatgtgtgtttatacgaatctttagtattctgagtttaacattggatattacatattagataatgtccttcatgaaaaaagtat  7746700                       --------->ATHB12                      <---------YAB1                      --------->ICU4                                         <----------DOF2                    <---------ICU4                                          --------->TOE2(3)                    --------->YAB1                                       ------->GAMYB                   --------->ICU4                                       <---------MYB111(2)                  <---------WOX13(1)                                    --------->MYB46(3)             <-------GAMYB                                            <-----------GT1            <-----------RAV1(1)                                   <--------HAHB4     --------->ANAC55(2)                                          <---------ICU4  <---------AHL20(2)--------->ATHB12              <---------YAB1 --------->ICU4                     -   tcattttatgtattctgttgaatgattattgacgcataaaaacattttcaataccattgtataacgcataattaacaacctttgtgaggcttcagccttc  7746800                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                         <---------AHL20(2)                <---------AHL20(2)                                                     --------->YAB1                        --------->AHL20(2)                                                   --------->AHL20(1)                     --------->AHL20(2)                                      <---------AHL20(1)--------->AHL20(2)         ----------->GT1         --------->YAB1               <---------AHL20(2)<---------AHL20(1)        ----------->GT1 <---------ARR11(3)                   --------->AHL20(2)<---------AHL20(2)        <------MYB83 --------->ARR11(3)    --------->ANAC55(2)         --------->AHL20(2)             <------MYB46(1) <---------AHL20(1)    --------->ANAC46           --------->YAB1            <------------CBF --------->AHL20(1)    --------->ANAC58         --------->AHL20(2)    <----------ID1      <---------AHL20(2) -------->AHL20(2)     --------->ANAC58     ----------->GT1  --------->AHL20(2)  <---------TOE1(2)   aaatatatcaatagaaattcagtttacgaaatcaacttaaaaaattttgaaaaaataataaaatttaaaaaaaaaacaaattgtaggttaaattttttta  7746900                                    --------->ANAC58                                    --------->ANAC58                        ----------->GT1                      ----------->GT1                    --------->CCA1(2) *TSS   --------->MYB52(1)                <---------ANAC46               ---------->DOF2     --------->DAG2                <------ZmHOX2a(1)       --------->AHL20(2)         ---------->DOF2   ---------->DOF2         <---------MYB52(1)   aaaacaaaataaaacagaaaagaaacgagaaaaaaaaaaagcaaaacaatcggagaaagttgatggaggagattgttcgttttgtgaacgcttcaatggc  7747000        ------>NtERF2       --------->ANAC46       --------->LBD16                                                                          <<<<<       ------>NtERF2                                                       --------------------->WRI1      <---------RAP2.6(2)                                             <-------TEIL<---------TOE2(3)     <---------LBD16             <----------DOF2           <---------HSFB2a(2)   <---------DOF5.7(2)   <-----------GT1         <----------DOF2                 --------->HSFB2a(2) --------->DOF5.7(2)   ataaatttccggccatcacatttcttctactttctctttctctctcccttgttgttgttctctagaattcgattcatcgttgttaacgtcgtccattctt  7747100                                                    ------>ZmHOX2a(1)                                                <---------ARR14(2)                                                --------->ARR14(2)                                               <---------GLK1(1)                                               --------->GLK1(1)                                     --------------->AGL15                           <---------GLK1(1)<---------TOE1(3)                                <-------                   ------>ZmHOX2a(2)----------------->AGL3                             <----------DOF2       ------>ZmHOX2a(2)   --------->GLK1(1)<---------TOE2(3)                     ---------->ID1 <----------DOF2 --------->ARR11(3) <-----------------AG<----------DOF2       <---------ANAC58 ------ <<<<TBF1    <----------DOF2        <-----------------AGL2  <-----------GT1   <---------ANAC58<------   cttctttgatcccttctttgatctctcacatttccgattccaatttagggtttcctctcttttcacatttctagggtttttcttgttccctttgtaccgg  7747200                                                                            <---------TOE2(3)                                                                         ------>ZmHOX2a(2)                                                                        --------->CCA1(2)                                                                        <------ZmHOX2a(2)                                                                       --------->AGP1                                                                       <---------AGP1                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                       <---------ARR11(3)                                                           <-----------RAV1(2) <--------P                                                          ======================HOX2a_HOX2a                                                  <--------P           --------->ARR11(3) ----------->GT1     ---------->DOF2           <---------TOE2(3)      <---------CCA1(2) --LBD16     <----------ID1              <---------YAB1   ------>ZmHOX2a(1) <---------TOE1(3) --->LBD16   ----------->GT1        <---------At4g35610   =====================HOX2a_HOX2a          - ---ANAC46---------->DOF2   <----------DOF2    <---------TOE1(3)  <---------ANAC46   <---------YAB1<-   agatggtgaattgaaaggaaaaataaaacgcttttgagagcttatatttgaggttgtttcctcaggttttgtagatctgaggttgctatttttgaattag  7747300                                                        --------->At4g35610                                                        <---------At4g35610                                                       ------->TEIL                                                    --------->ANAC55(2)                                                   --------->SPL7                                                   ------->TEIL   <-----------RAV1(1)                                     <---------YAB1<-------TEIL<---------ARR14(2)                                  <---------YAB1   <---------TOE2(2)               <-----------GT1<-------GAMYB      <---------SPL7--------->ARR14(2)   <----------DOF2           --------->MYB52(2)--------------->AtSPL3 -------->GLK1(2)            <---------MYB46(3)<---------------AtSPL8<---------ANAC46     --------->CCA1(2) --------GLK1(2)         <---------YAB1        <-----------------------TaNAC69(2)>>>>>>>>>TBF1     <-   agattcttttttttttttttcaaaattttgtttgttgtgatcatacatagacgtacgtagctccatttctggtggagaaggaagaagaagagaaatgagc  7747400  Previous    Next  AGI:  At2g17790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G51310.1); similar to binding [Arabidopsis thaliana] (TAIR:AT1G75850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60958.1); similar to hypothetical protein OsI_013447 [Oryza sativa (indica cultivar-group)] (GB:EAY92214.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48166.1); contains InterPro domain Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378) Range:  from: 7740717    to: 7746755    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g17800.1    Description:  ARAC1/ATGP2/ATRAC1/AtROP3/RAC1/ROP3 (Rho-related protein from plants 3); GTP binding. Identical to Rac-like GTP-binding protein ARAC1 precursor (ARAC1) [Arabidopsis Thaliana] (GB:Q38902); similar to ARAC6/ATROP5/RAC2 (RHO-RELATED PROTEIN FROM PLANTS 7), GTP binding [Arabidopsis thaliana] (TAIR:AT4G35950.1); similar to Rac-like GTP-binding protein RHO1 precursor (RHO1Bv) (GB:Q39435); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578) Range:  from: 7746938    to: 7749238    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version