Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->KAN4(1)                                                                   <---------KAN4(1)   ---------->ID1                 --------->YAB1                   --------->MYB46(3) ---------DOF2                   <---------YAB1               --------->ALFIN1 --->ZmHOX2a(2)           <---------ANAC58                 --------->DAG2 ---ZmHOX2a(2)            <---------ANAC58                ---------->DOF2  <----------DOF2 ---->ARR11(3)       --------->ALFIN1---------->DOF2----------->GT1<---------HSFB2a(1)           ---- -----ARR11(3)       <-----------RAV1(1)            ------->GAMYB <---------KAN4(2) --------->ZAT14 ---GT1        --------->YAB1  --------->YAB1    --------->MYB52(1)--------->HSFB2a(1) --------->ANAC46   tctttgttttttttttctcataagtgttgcctctcattataaagagtttgccaacggtacaaaagtggaacaatccactttcaaactacagacaacacat  7740300                          =========================RAV                          <-----------RAV1(2)                        ------>MYB46(1)                        --------->MYB52(1)                        ------>MYB83                                   <------MYB83                      <---------MYB59                                  <------MYB46(1)          <----         ----------->RAV1(1)     --------->GLK1(1)          <---------YAB1           --------->YAB1         =============================RAV                   <---------AHL20(2)  --------->AHL20(2) ----->AHL20(2)       --------->AtMYB61<-----------RAV1(1)--------->YAB1        <---------AHL20(2)   taaacagaaaacaacattggaagaccaaacaggtggtatccatgttgcagagaaaactatttataatttgatttggttcgattttaatcaaaatgcaaat  7740400         --------->AHL20(1)                <---------WOX13(1)         <---------AHL20(1)              <---------AHL20(2)         <---------AHL20(2)              --------->ATHB12         --------->AHL20(2)             <---------AHL20(2)      --------->YAB1                   <---------AHL20(2)                            --------->AHL20(2)     <---------YAB1            <---------ARR11(3)                                    <---------AHL20(1)     <---------AHL20(2)        <---------AHL20(1)                                    <---------AHL20(2)    --------->AHL20(1)         --------->AHL20(1)                              ----------->GT1    --------->AHL20(2)         --------->AHL20(2)                          <---------AHL20(2)     <--    <---------AHL20(1)   <-----------GT1--------->AHL20(2)         --------->AHL20(2)--------->AHL20(1) --------->AHL20(2)   ----------->GT1 --------->YAB1            <---------ANAC55(2) --------->AHL20(2) -----ATHB12     ---------->DOF2  <---------AHL20(2)     --------->YAB1   --------->AHL20(2)    <----   caaaaatataataaaataacaaagtagttacaatattttatattaattgatatgtttattcataatacataaaatataaaattgaaataaattttgttta  7740500                                     --------->At5g28300                                     <-------GAMYB          <---------ANAC58          <---------MYB46(3)          <---------ANAC58          ----------->GT1                                           <------       <---------MYB52(1)          <---------ANAC46                                        ------>ZmHOX2a(2)      <-------GAMYB                <---------ANAC58                                       <------ZmHOX2a(2)     <------MYB46(1)               <---------ANAC58                                      <---------AGP1     <------MYB83                  <---------TOE2(3)                                     <---------ARR11(3)    --------->MYB59                <---------RAP2.6(2)                                   --------->AGP1  <---------MYB52(1)          --------->ATHB12                                           --------->ARR11(3)  --------->ARR14(2)      <---------ARR14(2)                                         <---------MYB52(1)  <---------ARR14(2)      --------->ARR14(2)  <---------LBD16                       <-----------HVH21 -------LBD16      ---------->DOF2<---------LBD16    <---------AHL20(2)             <-------GAMYB  -- -------GT1 <XXXXXXXXXXXXXXXXXXXXMIR779.1   --------->GLK1(2)                    ------->TEIL--------   tccggttcggttgagttccaatatagcagaaacgattgcggttaaaattctggattttattcggtttgatgaaatagaatatggaccgttagatctaaag  7740600                                            ----------->HVH21                                         ------->MYC4                                         <-------MYC2                                         ------->MYC2                                         ------->MYC3                                         <-------MYC3                                        --------->O2                                        --------->TGA1a             --------->MYB52(1)         ==================================================bZIP_DOF            ------->GAMYB<---------ANAC46<-------MYC4            <-----------GT1            ======================================MYC_MYB    <---------AHL20(2)            <---------SPL7              <---------TGA1a     <---------AHL20(1)           <---------MYB52(2)           <---------O2        <---------AHL20(2)             <--------- ---TOE2(3)--------->MYB46(3)           --------->ANAC55(2) --------->AHL20(2)          --------->ARR11(3) ------->MYB59     <---------MYB46(3)<-------TEIL       --------->ICU4                  <---------ARR11(3) -->DOF2 --------->MYB52(1)  <------ZmHOX2a(1)   --------->YAB1 <-----------GT1<----------DOF2   ttaagtagaaacaacgaacggtggatagcgaggaaaacgtacacgtgtgaagcatgacataatttttttcccatccaaagactttcacaaggtctttttt  7740700                 *TSS                                                  --------->DEAR3(1)                 --------->GLK1(1)                                  ------>ZmHOX2a(2)         --------->DAG2             <---------TOE2(3)           <---------YAB1 <-----------RAV1(2)    --------->TOE1(3)      <------ZmHOX2a(2)            <------ZmHOX2a(2)     <------ZmHOX2a(2)    --------->TOE2(3) --------->LBD16                  --------->ARR11(3)    --------->ARR14(2)    <- -DOF2  ---------->DOF2  --------->GLK1(1)             <---------ARR11(3)    <---------ARR14(2)    <-   ttgaaacctgaaaagtgagaaacccagagatcgagattgagatttagagaagacgaagatcagaagatgatcgcagacggatcagaagatgaagagaaat  7740800              <---------ZAT2              --------->At4g35610              <---------At4g35610           --------->ABI4(2)           <---------ZAT2           <---------At4g35610          --------->ALFIN1         ------->PIF5         <-------PIF5        --------->LBD16        <---------DEAR3(2)       --------->ATERF1(2)       <---------DEAR3(1)       <---------ATERF1(2)       --------->DEAR3(1)      <------NtERF2      --------->ATERF1(1)     ------>NtERF2     <---------ATERF1(1)     --------->ABI4(1)    --------->ATERF1(2)    --------->RAP2.3(2)    --------->DEAR3(1)    <---------DEAR3(1)    <---------ATERF1(2)    --------->RAP2.3(3)                                ----------->GT1   --------->ERF1                                --------->ANAC58   --------->RAP2.3(1)                           --------->ANAC58   --------->ATERF1(1)         --------->ANAC58  --------->ANAC46   --------->DEAR4(2)          --------->ANAC58 <---------ZAT18  <---------ATERF1(1)     --------->YAB1        ------->GAMYB --------->ANAC58       --------->ANAC58  --------->ANAC58 <---------DEAR3(1)     --------->ANAC46  --------->ANAC58                               <---------ANAC58 --------->ANAC58       --------->AtLEC2  --------->ANAC46         <----------DOF2       <---------ANAC58 --------ANAC58         --------->ANAC58  --------->AtLEC2         <---------DAG2     <----------DOF2 --------ANAC58    <----------DOF2    <-----------GT1  --------->YAB1     <-----------HVH21   ggctcgccgccggtgctgctgctttcaagcaaaacgcattttacatgcaacgcgctattgtaaattctgcttttcccttcacttcttcctttcgtttctc  7740900                                        <---------DAG2                                        <----------DOF2                                     <-----------GT1                                     ---------->ID1                                  <---------------AtSPL8                                  --------------->AtSPL8                            ----------------->AG     --------->REM1(2)                            ----------------->AGL1  --------->ALFIN1                        <---------HSFB2a(1)       <---------ANAC46                        <---------HSFC1(2)    <---------WOX13(1)                        --------->HSFB2a(1) --------->ATHB12                                      <--          <-------GAMYB --------->HSFC1(2) <---------YAB1            --------->TOE2(3)            <--   tgtgactattttcgttgaaattgagaaatttccaaatttgtacttttcattgatgtgtagaattgaaggaaccctaattttggttttgggaaaaaacttg  7741000                           --------->GLK1(2)              <---------At4g35610                         --------->KAN4(1)                --------->At4g35610                      --                         <---------KAN4(1)              <-----------RAV1(2)                 ---------                 <------ZmHOX2a(1)                   --------->At4g35610  <---------ANAC55(2)      --       ----------->GT1  <---------KAN4(2)       --------->ARR14(2)        --------->ANAC55(2) ------- -------ANAC58 --------->MYB59      <---------GLK1(2)<---------At4g35610 <---------LBD16<-----------HVH21 -------ANAC58<---------ICU4    ---------->DOF2 <---------ARR14(2)      --------->MYB52(1)  ---------   tcttgtttttggttaattaggactcgaataatctgaaagatgctctcaagtattcggctcagatgctaagcgagttacggacttcgaagctatcacctca  7741100          ------>ZmHOX2a(2)              --------->TOE2(3)        --------->ARR11(3)             -------->P      <---------YAB1                 ------>ZmHOX2a(2) ------->ANAC58                    --------->AGP1 >At4g35610               <---------ANAC58           <---------AHL20(2) ------->ANAC58        <-----------GT1 ------->TEIL  --------->AHL20(2)  <---------WOX13(1)         - ---->HVH21       <-------GAMYB<---------At4g35610<---------ICU4     <---------MYB52(1)            <- >ANAC46<---------ARR11(3)<---------ANAC58     --------->YAB1       --------->TOE2(3)              --   caagtactatgatctatgtgagttgtttccgtcttctgatctaccttgatcatatttatttcgctcaatcccttaattgacttaatagggttttgtttgt  7741200  Previous    Next  AGI:  At2g17790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G51310.1); similar to binding [Arabidopsis thaliana] (TAIR:AT1G75850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60958.1); similar to hypothetical protein OsI_013447 [Oryza sativa (indica cultivar-group)] (GB:EAY92214.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48166.1); contains InterPro domain Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378) Range:  from: 7740717    to: 7746755    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version