Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           >>>>>>>>>MYB1                              --------->At4g35610       ===============HOX2a_HOX2a                   <---------At4g35610       ------>ZmHOX2a(1)                   ----------------->AGL3 --->ANAC58                                --------->MYB46(3) --->ANAC58    ================================HOX2a_HOX2a --->ANAC46    ------>ZmHOX2a(2)           ----------------->AGL2 -->TGA1--------->MYB52(1)             <---------MYB59                                --------->At4g35610 -->HVH21>>>>>>>>>MYB2   <-----------GT1------>ZmHOX2a(1)                   <---------MYB59  --------   caatttctcctaactgatcccatgaattagccatttctcttcctaaccaaaaacagctcaaaaactcaaattttgagacctaaaacgaagcagaacataa  7734100                                    --------->ICU4                                 <---------YAB1                              --------->GLK1(2)                                                    <-                             <---------GLK1(2)                                  <---------TOE2(3) <--                       --------->ZAT18                                          <---------YAB1    <--                       <---------ZAT14 <---------YAB1              --------->ANAC58               ---             <-----------GT1 --------->ARR14(2)       --------->CCA1(2)  --------->YAB1           --- ->TOE1(2)<----------DOF2    <---------ARR14(2)---------->DOF2     --------->ANAC58         ---------   gaaagtttgagacttttacctcgtgtgaacagattctgattatgaataacaaagagatttgaagttaccaaggaatcacattatggttcgactgcgacaa  7734200                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    --------->ARR14(2)                    --------->ARR14(3)                    <---------ARR14(2)                    --------->ARR11(3)                    --------->AGP1                    <---------ARR11(3)              --------->DOF5.7(2)                                     <---------AHL20(2) --------AHL20(2)   <---------ARR14(3)                      ----------->GT1 -------AHL20(2)   --------->RVE1(1)                       --------->DAG2 -------AHL20(1)---------->DOF2                           ---------->DOF2 ------>AHL20(2)<---------DOF5.7(2)                    --------->TOE2(3)<-----------GT1 ------>YAB1 --------->TOE2(3)                    <---------AHL20(2) --------->AHL20(2) -->RAV1(1)  --------->TOE1(3)              <---------TOE2(3) ----------->GT1   taaaattctctactacgttaaagatcttcaaaacagagaacattttaagaatttttttcttaaagtgaaaattttatctgtttaagtgtaaactcatcgg  7734300                  ----------->GT1                                 <---------YAB1<------ZmHOX2a(1)           <---------ANAC58                      --------->YAB1  <---------ARR11(3)                 <           <---------ANAC58        --------->MYB46(3)            --------->ARR11(3)                 -           <---------ANAC46     --------->ZAT18 <---------YAB1   --------->AHL20(1)               <--  --------->AHL20(2)       ---------->DOF2----------->GT1        <---------AHL20(1)    <---------ZAT6   agaaaaaaatgtttcttggagagtgaaatcaaagtgaacaaacatggaaaatcatagaaatttagaatatttttgtaagagaggagatagtgttgaaatg  7734400        <---------TOE1(2)                                                                 <----------        <---------TOE2(2)                                                                ------------  <---------At4g35610                                                                    ------------  --------->ANAC46                                                                    *TSS----------- ---------ALFIN1                                      <---------ARR11(3)      ---------->DOF2 -------->REM1(1)         <---------ICU4  <---------ANAC58                   <---------WRKY12  ------ ---------HVH21  ---------->DOF2          <---------ANAC58                   <---------WRKY38(1)   --   cttcacctcataggttgaagaaagtcaagaattacagagatggtacttgtggagaaggtattagtcttggaacgagaggtcaaagtgattatccaaaaaa  7734500                                                         --------->O2           ---------->ID1                                                         <---------O2         <------MYB83   ----------->GT1     <---------REM1(1)                 <---------TGA1a      <------MYB46(1)  >>>>>>>>>TBF1      --------->ZAT18                 <-----------HVH21       --------->MYB59 -----AGL15          <---------ZAT14              --------->ANAC46           <---------MYB46(3) ----->AGL3          --------->ZAT14           --------->ZAT18               <---------AtMYB61 ----->AGL2          <---------ZAT18           <---------ZAT14       ----------->HVH21 ---->AGL15     --------->ARR11(3)             --------->ZAT14    <---------ANAC46 ---->DOF2      <---------ARR11(3)     --------->TOE1(2) --------->TGA1a<---------AtMYB61           < ---------------------->ANAC81        ------>ZmHOX2a(2)------------->DYT1<---------MYB46(3)         -   agaagaagaaaataagaagatagtggagtagctaatgtgatcgtgagagtacacgagtcacgagagtttcggtgatggtttggtcgtattatcgaatgta  7734600                              --------->At4g35610                      <---------DEAR3(1)                   --------->ANAC46                   --------->O2                   <---------TGA1a               <-----------HVH21            <---------At5g28300<---------ANAC58           <-----------GT1    <---------At4g35610         <-----------GT1<------NtERF2     ========================bZIP_DOF     <----------DOF2<-----------HVH21                                --------->LBD16  <---------YAB1   --------->bZIP60(2)                   <-----------GT1          <---------ANAC46 --------->KAN4(2) --------->TGA1a                 --------->ANAC55(2)        <---------DAG2 ---------KAN4(1)  <---------O2<---------ANAC58    <---------ANAC55(2)        <----------DOF2   <---- -------->KAN4(1)<---------ALFIN1                <-----------GT1  <---------At5g28300           -----   gattattcttttttcactgccacgtcggagtctgcttgcacgagttgcaaattacgaattagccattctaccgcgtttagctttacgcgtgagtttttag  7734700                                                                          <---------------AGL15                                                                          <---------ALFIN1                                                                         ----------------->AGL3                                                                         <-----------------AGL1                                                                         <-----------------AG           ----------->GT1                                               ----------------->AGL2     -      --------->AHL20(2)                                           <---------ANAC46                 <      <---------AHL20(2)                         --------->YAB1    <---------ANAC58                <-      XXXXXXXXXXXXXXXXXXXX>MIR830           <---------MYB52(1)     <---------ANAC58  --------->WOX13(1)  <---------AHL20(2)          --------->AtLEC2 --------->ANAC58   --------->ZAT2  --------->At5g28300  --------->AHL20(2) ----------->GT1       --------->TOE2(3)  --------->ANAC46   ----------->GT1   -- -----At4g35610   --------->DAG2       --------->YAB1   --------->WOX13(1)--------------->AGL15  <--- ---->At4g35610  ---------->DOF2  ------>NtERF2--------->ANAC58  ------->TEIL   <---------YAB1   ----   ctaaatatttattttgaaaaaaagtgtaaaacatgcagccatcatcgttaagcatcatccatcaacgtagcttgcaccacttatggtaaatcaaactcat  7734800                    <---------DAG2                    <----------DOF2        <---------YAB1 ----------------------->TaNAC69(2)                                                     <-----------HVH21 -------->ATHB12<---------MYB52(1)                                                 --------->ARR11(3) ---------ICU4--------->ANAC55(2)                                 <---------ARR11(3) <---------ICU4 --------YAB1 <---------ANAC55(2)                                <---------ICU4   --------->YAB1 ---- ------->ICU4 <---------ANAC58                                --------->YAB1   --------->YAB1 ------- ------ICU4   <---------ANAC58      <----------DOF2          <---------YAB1  <----------DOF2  ------- ----->YAB1 <-----------GT1      <---------MYB52(1)   ----------->GT1       --------->TOE2(3) -------   catcattgttcttattacgttacttttcatttcccgttctttatcacttagttaactcgttatatcattatctcattacctttataatcttgtcacaagc  7734900                                                         --------->SPL7                                                     --------------->AtSPL8                <---------     --------->MYB46(3)                            <-----------GT1                        <----------   --------->YAB1                               <---------------AtSPL3       ----------------->AG --->TEIL                               <-----------GT1<---------SPL7        --------->TOE2(3) -->ANAC58       <---------TOE2(3)    <---------ATHB12<---------ANAC58      <-----------------AGL1 -->ANAC46    --------->AHL20(2)    --------->WOX13(1)<---------ANAC58  <-------TEIL <---------MYB52(1) -->ANAC58    <---------AHL20(2)  --------->MYB46(3) --------------->AtSPL3 <-----------------AG   acctataacaaacaaattaaacgtttagtccctcgaaccaattaacaaactttgtaccgtaccaaaaactcaaattcatccctaatcggtatttaaccct  7735000  Previous    Next  AGI:  At2g17780.1    Description:  MCA2 (MID1-COMPLEMENTING ACTIVITY 2). similar to MCA1 (MID1-COMPLEMENTING ACTIVITY 1) [Arabidopsis thaliana] (TAIR:AT4G35920.3); similar to MCA1 (MID1-COMPLEMENTING ACTIVITY 1) [Arabidopsis thaliana] (TAIR:AT4G35920.1); similar to MCA1 (MID1-COMPLEMENTING ACTIVITY 1) [Arabidopsis thaliana] (TAIR:AT4G35920.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO43166.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) Range:  from: 7731967    to: 7734486    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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