Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->CCA1(2)                                                                     <---------GLK1(1)            <--                                                                    --------->ARR14(2)            <--                                                                    <---------ARR14(2)            ---                                                                    <---------ARR11(3)            ---                       --------->CCA1(2)                          <---------TOE2(2)              <---                      --------->ARR11(3)                          <---------TOE1(2)              ----                    <---------TOE2(3)                          <---------ANAC46    --------->ARR14(3)                    ----------->ARR10                      <---------TOE2(3)       <---------ARR11(3)            -------->ATHB1                                <---------DOF5.7(2)      --------->ARR11(3)            --------->YAB1                              --------->DOF5.7(2)        <---------AHL20(1)            <---------ICU4                             --------->TOE2(3)           <---------ARR14(3)            --------->ATHB12    ----------->GT1        --------->TOE1(3)           --------->AHL20(1)           <---------YAB1     ---------->DOF2     --------->CCA1(2) --------->ARR11(3)       -------- -----AHL20(2)      <---------TOE1(3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------ARR14(2) -GT1--------->YAB1 <---------YAB1   --------->DAG2   --------->ANAC46             --------->ARR14(2)   ttttctatgaaaaatcattgttaagatttgtgtaaagaaaaattggattaagctatacgttaacgtcgtagatatacgaacacaatatcttgtaagaaaa  7699100        ----------->GT1                 --------->AHL20(2)       --------->DAG2             --------->YAB1      ---------->DOF2       --------->AHL20(1)  --------->AHL20(2)        <---------AHL20(1)                                    --------->AHL20(1)  <---------AHL20(2)       --------->AHL20(2)                                     --------->ARR11(3) -------AHL20(1)       <---------AHL20(2)                                         <---------AHL20(1) -------AHL20(2)       --------->AHL20(2)                              --------->TOE2(3) ------>AHL20(2)       --------->AHL20(1)                            --------->ARR11(3)            -- ------>AHL20(1)  --------->AHL20(2) --------->ATHB12                --------->GLK1(2)----------->GT1 ------AHL20(2)   <---------AHL20(2) --------->ATHB51         <----------ID1 <---------AHL20(2)    -- ----->AHL20(2)   --------->AHL20(1)<---------YAB1   ----------->RAV1(1)     --------->AHL20(2)   --- ->AHL20(2)    --------->YAB1   <-----------GT1   --------->ANAC46   <---------ARR11(3)         -----   taaattaaaaaagtcaaaaataaaataaaatatataacataattgaatatacaaacaacaaaatacgagaaaatctaaattaaaaatattgtttaaaaaa  7699200                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                            --------->AHL20(2)               <---------YAB1                                            <---------AHL20(2)            <---------AHL20(1)                                           <---------AHL20(2)             --------->AHL20(1)               <---------ANAC46         <---------AHL20(2)             --------->AHL20(2)               --------->ANAC46        --------->ICU4                  <---------AHL20(2)  <---------AHL20(1)               ----------->GT1   --------->AHL20(2)                   <---------AHL20(2)   --------->AHL20(2)           <----------DOF2      <---------AHL20(2)                 <---------AHL20(2) <---------AHL20(2)  <---------YAB1--------->TOE2(3)<---------AHL20(2)               --------->ICU4   --------->AHL20(2)  --------->AHL20(1)         --------->AHL20(2)             --------->AHL20(2)    --------->AHL20(2)  <---------AHL20(2)        --------->AHL20(2)  <-----------GT1 <---------ICU4    <---------AHL20(2) --------->AHL20(2)         <---------AHL20(2) <---------AHL20(2) --------->AHL20(2)  --------->AHL20(2) --------->YAB1--------->ANAC55(2)     --------->AHL20(2)   <---------AHL20(2)--------->AHL20(2) ------->AHL20(1)         <----------DOF2  --------->AHL20(2) <---------TOE2(3)<---------AHL20(2) <-- ------->AHL20(2)   --------->ICU4   <---------ICU4     --------->AHL20(2)<---------AHL20(2)--------- ------>YAB1   <---------ANAC55(2) <---------TOE2(3)    <---------AHL20(2)--------->AHL20(2)<-------- ---->AHL20(2)<---------TOE2(3) --------->AHL20(2) --------->TOE2(3)  --------->AHL20(2)   <---------AHL20(2)   aaataatattgtgttttacgtaaatattctttaaattaatatttattaatttatcttattaattaatatttattaatttattatataaattaataaaatt  7699300                <---------AHL20(2)                --------->AHL20(2)               <---------AHL20(2)               --------->AHL20(2)              <---------YAB1                   <-----------GT1            <--------HAHB4                    -------->HAHB4            <---------ICU4                    --------->ATHB51            --------->ATHB51                 <---------YAB1         <---------ICU4                    --------->YAB1         <--------HAHB4                    <---------ICU4                            <---------ICU4         --------->YAB1                   <---------YAB1                            <---------YAB1        <---------ATHB12                  <---------AHL20(2)                        --------->ICU4        <---------YAB1            <----------DOF2         --------->AHL20(2)<------ZmHOX2a(1)      ------>ZmHOX2a(1)     <---------ARR14(2)<---------ICU4            <---------ZAT14   ------->TEIL ---------RAV1(1)  <---------AHL20(2)   --------->YAB1   --------->YAB1 --------->ZAT14<---------YAB1 >AHL20(2) --------->ICU4   --------->ARR14(2)--------->YAB1   --------->YAB1---------->DOF2  <------ -AHL20(2) <---------YAB1   --------->GLK1(2)--------->ICU4 --------->YAB1 --------->ANAC46  <-------   atgtggtcctatcattattaatttatagagtttctgctatatttataattatcgccccaaaataataaaaacagtacaggaaagtcattatgaacatcat  7699400                                                                                ---------->DOF2                                                                            ------>NtERF2                                                                           ----------->HVH21                                                                           --------->WRKY45                                                                           --------->WRKY12                                                                           --------->WRKY38(1)                                                                          --------->ATERF1(1)                                                                          <----------CDC5                                                                          <------NtERF2                                                                         <---------At4g35610                                                                         <---------ATERF1(1)                                                                         --------->At4g35610                                                                         ------>NtERF2                                                                        <---------DEAR3(1)                                                                       --------->ATERF1(1)                                                                       --------->ZAT18                                                                       <------NtERF2                                                                      <---------RRTF1(1)                                                                      <---------DEAR4(2)                                                                      <---------ATERF1(1)                                                                      <---------RAP2.3(1)                                                                      <---------ERF1                                                                      <---------ORA47(2)                                                                      ------>NtERF2                                                                     <---------DEAR3(1)                                                                     <---------O2                                                                     --------->ANAC46                                                                     --------->O2                                                                     <---------RAP2.3(2)                                                                     --------->DEAR3(1)                                                                    --------->SPL7                                                               <---------ARR14(2)                                                     <-------TEIL ----------->HVH21                                                    --------->GLK1(2)<---------RAP2.3(3)  ---------->DOF2              ------------>CBF <------NtERF2  --------->ARR14(2) --------->ANAC46         ---------->DOF2   ------->GAMYB     <---------At4g35610          <---------CCA1(2) ---ICU4         --------->ARR14(2)      --------->MYB52(1)   --------->At4g35610    --------->CCA1(2) --YAB1          <---------ARR14(2)     --------->MYB46(3)<-----------HVH21--------->DEAR3(1)       <   tacacaaagcccattacaaaattcgcccataagcccaatctaacaacggcagagattcagagtcagttccgacggcgctgaccaaagaaacgcgtctctc  7699500                                            <---------ANAC55(2)                                            <---------ANAC46                                            <---------ANAC58                                            <---------ANAC58                                            --------->O2                                  <----------ID1       <---------GLK1(1)                       ---------->DOF2      <---------O2  --------->YAB1                 <----------DOF2                       ===============================bZIP_DOF                  --------->ANAC58 <---              <---------------AGL15         --------->TGA1a                 --------->ANAC58    -----             ----------------->AGL1         <---------TGA1a   <---------GLK1(1) --------->ANAC58<----           <-----------GT1*TSS  ---------->DOF2    >>>>>>>>>TBF1            --------->ANAC58   ------ ---------LBD16------>ZmHOX2a(1)======================bZIP_DOF--------->GLK1(1) <<<<<<<<<<<<<<<<<LFY   tctctggagaaaatttcctcacagagaaagaagaaaaagacgagagacgtgaagaagaaatcagaattcagaattgagaagcaaacaatggcttcaacga  7699600                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                         --------->CCA1(2)                        <---------AGP1                        --------->AGP1                        --------->ARR14(2)                        <---------ARR11(3)                        --------->ARR11(3)                        <---------ARR14(2)                   <---------GLK1(1)                       <---------CCA1(2)                     --------->GLK1(1)                      ----------->ARR10                     <---------ARR14(2)                    <------ZmHOX2a(2)              <-----------GT1                        <---------ALFIN1 <---------ALFIN1  <---------ARR14(2)           <---------AHL20(2)                 ---------->DOF2 ---ZmHOX2a(2)     <-----------ARR10     --------->MYB52(1) --------->ARR14(2)<---------MYB52(1) ---->ARR11(3)     --------->ARR14(2) --------->TOE2(3)   --------->LBD16     --------->At5g28300 -----ARR11(3)   --------->LBD16      --------->TOE1(3) <---------LBD16      ----------->GT1 ->GAMYB       <---------LBD16------->TEIL     --------->AHL20(2)            --------->LBD16   tctacacttgcaaagaatgcggatcagatctgaatctaaaccctaacgatttatttccaccggatttctacttcgaagccggtaacaaaggaacactctc  7699700                ------>NtERF2               --------->DEAR3(1)              <------NtERF2             ------>NtERF2            <---------DEAR3(1)            --------->DEAR3(1)            --------->ANAC46           --------->ATERF1(1)          <---------ATERF1(1)         <---------ETT(2)         --------->ETT(2)         --------->WRKY12         ----------->HVH21         --------->DEAR3(1)         <---------DEAR3(1)        --------->ATERF1(1)        <------NtERF2       <-----------HVH21       ------>NtERF2       <---------ATERF1(1)      --------->DEAR3(1)      --------->RAP2.3(2)      --------->RAP2.3(3)     --------->RAP2.3(1)     --------->ATERF1(1)     --------->RRTF1(1)     --------->DEAR4(2)     <------NtERF2     --------->ERF1    <---------ATERF1(1)    --------->ABI4(1)    ------>NtERF2   --------->DEAR3(1)   <---------DEAR3(1)   --------->ANAC46                                                                              ----   --------->RAP2.3(2)            ---------->DOF2                                          <---------ARR14(2)   --------->RRTF1(3)          --------->HSFB2a(2)                                         --------->ARR14(2)   --------->RAP2.3(3)         <---------HSFC1(1)                                        ------->GAMYB  --------->RAP2.3(1)      --------->ARR14(2)                                           --------->ANAC58  --------->DEAR4(2)       <---------ARR14(2)                                     <---------ARR14(2)  --------->ERF1--------->LBD16<---------HSFB2a(2)    <----------DOF2             --------->GLK1(2)  --------->ORA47(2)     <---------YAB1        <------ZmHOX2a(2)                 --------->GLK1(1)  --------->ATERF1(1)   ----------------->AGL1<---------ARR11(3)             <---------LBD16  <------ <---------RAP2.3(1)    ----------------->AG  --------->ARR11(3)  --------->TOE1(3)     --------->ANAC58 <---------ATERF1(1)  --------->GLK1(2)   --------->CCA1(2)       --------->TOE2(3)   --------->MYB52(1)   attcgccgccgtcgacgccgagaaattccgattcgagaaagaagataagatcatgcctttcttcgaaaccctaaattactggggaatccaacggaaacga  7699800                        --------->AtMYB61                        <---------ALFIN1                                                         <---                        ------->GAMYB                                                     <------MYB83                --------->ZAT2    <-----------HVH21                                       <------MYB46(1)          --------->ZAT18        <---------MYB46(3)                                      --------->MYB59          <---------ZAT18  --------->AtMYB61                                          <---------ARR14(2)          --------->ZAT14 --------->bZIP60(2)                                         --------->ARR14(2)    <------ZmHOX2a(2)  --------->MYB46(3)                                          <---------ANAC55(2)   --------->ARR11(3)  <---------MYB55(2)                                          --------->ANAC55(2)   <---------ARR11(3)  <---------MYB111(2)                 ------>ZmHOX2a(1)    <---------ARR14(2) --->TEIL <---------ZAT14 --------->ANAC46  --------->ANAC46          ----------------------->TaNAC69(2) ---MYB52(2)    --------->At4g35610   --------->REM1(1) ------>ZmHOX2a(1)       --------->ARR14(2)   accaagatcaagtgcactagctgcaaccacctcatcggttacatctacgacgatggtcctcctctcactggtggtattggccaatacggatttggtccga  7699900            ------->PIF5            <-------PIF5          ------>ZmHOX2a(1)                 <-------GAMYB                      ----------->GT1      - --------->ANAC58                          <---------MYB46(3)         ---------->DOF2              <- --------->ANAC58                          <---------DEAR3(2)      <---------At4g35610             -- --------HVH21     ------>ZmHOX2a(1)      <---------DEAR3(1)       --------->At4g35610   <----------DOF2   gtcaagtcattcctcgtgctcctcggtatcgattcaaaaccaaggcggttcaagtctcgtcccagacttagctaaagcagagggtttaatgcttttacat  7700000  Previous    Next  AGI:  At2g17705.1    Description:  peptide-methionine-(S)-S-oxide reductase. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G08330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24563.1); contains InterPro domain Methionine sulphoxide reductase B; (InterPro:IPR002579) Range:  from: 7699526    to: 7700335    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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