Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                ------>ZmHOX2a(1)                                                             --------->TOE1(2)                                                          <---------ARR14(2)                        <---------AHL20(2)                --------->ARR14(2)                    <--------HAHB4                       --------->GLK1(1)                    <---------AHL20(2)                   <---------CCA1(2)                    --------->YAB1              <---------ARR14(2)                    -------->ATHB1              --------->ARR14(2)                     ----------->GT1                    --------->AHL20(2)          <xxxxxxxxxxxxxxxxsmallRNA(s)       --------->AHL20(2)                    <---------ICU4            <---------MYB46(3) ------>NtERF2     <---------AHL20(2)                   <---------ATHB51         <---------LBD16  --------->TOE2(2) xxxxxxxxxxxxxxxxxxxxxx                   <---------ATHB12        xxxxxxxxxxxxxxxx>smallRNA(s) --------->ARR11(3)  --------->MYB46(3)--------->ATHB51--------->YAB1 <---------HSFB2a(2)  <-----------ARR10 ------GT1         --------->ICU4  <---------YAB1  --------->HSFB2a(2)  <---------ARR11(3)        ---   ctcaaacaccatcaaatcccaattattttctttcaacatcataaactgcggttccagacatatcctccgactaaaatctaccgatataaatgtaaatcta  7689500                                          <--------HAHB4                                          --------->ATHB51                     --------->MYB111(1)  <---------ICU4      <---------AHL20(1)        --------->AHL20(2)      --------->AHL20(2)        <---------AHL20(2)                                            <------      <---------AHL20(2)      <---------YAB1       <-----------HVH21      --------->WOX13(1) <-------      --------->AHL20(1)  --------->ANAC55(2)  <---------TOE2(3)    --------->ARR11(3)       --------     --------->AHL20(2)   <---------ANAC55(2) <-----------GT1      --------->YAB1    <---------DAG2     <---------AHL20(2) <-----------GT1  <---------YAB1           <---------ATHB12<-----------GT1 --------->AHL20(2)  --------->MYB52(2)  --------->ICU4   <---------MYB52(1)     <---------ZAT18 x>smallRNA(fl3)     --------->MYB46(2)--------->YAB1  <---------LBD16   <---------AHL20(2)  -------- ------>YAB1       <---------MYB52(1) <---------YAB1 <-----------GT1<---------ARR11(3)       <-------   gcataaaataaatttctctctgttagttacttatttttatatcataattaacatttcaccggttttcaatgatattcaattagttcaccttacaatttat  7689600                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                -----          --------->AHL20(1)           <----------DOF2                                          <----          <---------AHL20(1)           <---------DAG2                                           <----       --------->AHL20(2)  --------->MYB52(1)                                                   -----    --------->YAB1        <---------ZAT14                                                       <----   <---------YAB1         --------->ZAT14                                                       ----- ---AHL20(2)            --------->At4g35610                             ---------->DOF2         ----- --AHL20(1)             <---------At4g35610 <-----------GT1    ---------->DOF2                  <---- ->AHL20(2)    <---------AHL20(2)<---------WOX13(1)     <---------TOE1(3)            <---------ANAC58 ->AHL20(1)  <---------AHL20(2) <------------CBF        <---------TOE2(3)--------->DAG2     --------- --AHL20(2)<---------AHL20(2)  --------->ATHB12     <----------DOF2  ----------->GT1 <---------ANAC58   tcattttcattatatattttttagtcagcaaactgattgagctttttctcaactctttaaggtttgaaaggaagtaaagttgaactctcgtgctcaaaga  7689700   <-----------RAV1(2) ---------ZAT14 -------->ZAT14 -------->ZAT18 --->ZmHOX2a(2) ---ZmHOX2a(2) ----->CCA1(2) -------ARR10 ---->AGP1 -----ARR14(2) -----AGP1 ---->ARR14(3) -----ARR11(3)                    --------->ARR14(2)                      ----------->GT1 ---->ARR14(2)                    <---------ARR14(2)                     --------->ATHB12 ---->ARR11(3)               ----------->GT1--------->AHL20(2)          --------->ICU4   ------------ -----ARR14(3)   --------->HSFB2a(2) <---------ETT(1) <---------YAB1<------ZmHOX2a(1)    ============ ->DOF2  ---------->DOF2  <---------At4g35610<---------AHL20(2)   <---------TOE2(3)   <-----------GT1   tctgcacaggtaaaagtttctcgacttgagctagtgaatccgaccatttattcattttcattttttataaggaaatgagtgaattttgtttccctataga  7689800                                    ---------->DOF2                                <----------ID1                        --------->YAB1                   <---------AHL20(2)                               ------------>CBF     <---------ZAT18     <----------DOF2                           ----------->RAV1(1)     --------->ZAT18     <---------------AGL15             ----------->GT1 --->AGL15         --------->AHL20(2)                      <-------GAMYB ========================================MADS_MADS        ----------->GT1--------->YAB1        ------   ctaaaaatgcactatccatattttattctttaataggccaaagcatacaaactatttggagcgttaaaacaacaatagtagcaaaaacaggggagagaaa  7689900                --------->MYB52(1)          ---------->DOF2         <---------WRKY38(1)         <---------WRKY12                                                                    --------         <---------WRKY45                                                                    --------        <<<<<<<<<<WRKY40                                                                     --------        <<<<<<<<<<WRKY62                                                                ------->MYC3        <---------------------WRI1                                                      <-------MYC2        --------->WRKY18(1)                                                             ------->MYC2        <<<<<<<<<<WRKY18               <---------WOX13(1)   <---------MYB52(1)          <-------MYC3       <-----------HVH21            <---------AHL20(2)     <-----------HVH21     --------->LBD16      <------MYB83       --------->HSFC1(2)                <-----------TGA1     <---------HSFB2a(2)      <------MYB46(1)    <---------HSFB2a(1)              --------->ANAC46      --------->HSFB2a(2)    <---------WOX13(1)   <---------HSFC1(2)         --------->ZAT14          --------->ARR14(2)  <---------MYB46(3)     --------->HSFB2a(1)        <---------ZAT14          <---------ARR14(2)  --------->ATHB12     <------ZmHOX2a(1)           <----------DOF2          <---------MYB52(1) --->CCA1(2)    -------->P <----------DOF2   ----------------------->TaNAC69(2)<---------LBD16   tgggtgattggtcaaagctaccagaggagcttcttggtttaattgctctcagactttactccgtcatcgaactcatccgtttccggagcatatgcaagtc  7690000                          --------->ANAC58                    <------NtERF2                   ------>NtERF2                   <-----------HVH21     --------->GLK1(1)                --------->LBD16          --------->ZAT2                ------>NtERF2            --------->At4g35610              <---------ATHB12          <       ------>ZmHOX2a(1)  --------->ANAC58                        --------->At4g35610            ---- <---------ANAC58 <---------ANAC46       <---------At4g35610     --------->RAP2.6(2)         -------- <---------ANAC58--------->RAP2.3(1)     <---------ZAT2       --------->ANAC46               -------- ->ANAC58     <---------LBD16         --------->LBD16         --------->ANAC58          <---------ZAT18 ->ANAC46 <---------At4g35610       <---------LBD16           --------->ANAC58          --------->ZAT18 ->ANAC58 --------->At4g35610       ----------->RAV1(2)     ---------->DOF2<---------ICU4    --------   atggcgctcctctgcttccggcgtcaacaagaaccattccctgagctcccctctcatctacttcaagccgctccaaatcattctcgctcgcgcacaagca  7690100                                        <-------MYC2                                        ------->MYC2                                        <-------MYC4                                        <-------PIF5                                        ------->PIF5                                        ------->MYC3                                        ------->MYC4                                        ------->PIF4                                        <-------PIF4                                        <-------MYC3                                       <---------O2                                       <---------TGA1a                                       --------->ANAC55(2)           ------>NtERF2                                       <---------bZIP60(2)          --------->DEAR3(1)                                       <---------ANAC58          --------->ANAC46                                       <---------ANAC58      <---------ALFIN1             <---------WOX13(1)                                       <---------ANAC55(2)----------->HVH21             <------MYB46(1)                                       --------->TGA1a   <-----------HVH21              --------->MYB55(2)                                       =======================bZIP_DOF                  <---------MYB46(3)                            --------->ANAC58   <---------GLK1(2) --------->ANAC58       <------MYB83                            --------->ANAC58----------->RAV1(1)  --------->ANAC58 --------->MYB52(1) ----------ID1       --------->YAB1    --------->O2      <-----------TGA1    --------->LBD16 ----->MYB52(1)     <---------YAB1  ----------->HVH21   --------->ANAC46   <---------LBD16<--------P ->ANAC46         --------->YAB1  ------>ZmHOX2a(1)<----------DOF2<---------ATERF1(1)  <---------AtMYB61 ->ANAC58       --------->ANAC58  --------->At4g35610 <---------ANAC58  ------>ZmHOX2a(1)<-------GAMYB ->ANAC58       --------->ANAC58  <---------At4g35610 <---------ANAC58 <---------ALFIN1--------->ALFIN1   aacggacaaattttgagcaagtatcatggcacggtcctctcacgtgccacattctttcgcgtcacactcgcctcctctccggaccaagggtggttgatca  7690200                          <-----------GT1                                   <---------ZAT2                         --------->GLK1(1)                                  <---------At4g35610                       <---------GLK1(2)                                   --------->ANAC58                       --------->ARR14(2)                                  --------->ANAC58                     --------->LBD16                                   --------->ANAC58         <----                   <---------LBD16                               --------->HSFB2a(1)          -------                  --------->MYB52(1)              --------->ANAC58     --------->ANAC46     <------NtERF2           ================================HOX2a_HOX2a           <---------HSFB2a(1)    <-----------HVH21           ------>ZmHOX2a(2)                      --------->ANAC58     --------->ANAC58<-----------RAV1(1)          =================================HOX2a_HOX2a         <------ZmHOX2a(1) <---------CCA1(2)          <------ZmHOX2a(2)         ------>ZmHOX2a(1)---------->DOF2  <---------HSFB2a(2) --------->ETT(1)   aatcagacaccgatctcaaataccggaatttccatctcctaaactgcctctctcgcaaagcactaggacgttctcgcaagctcatttctctgtcggagtt  7690300                                         <------NtERF2                                         --------->LBD16                                        --------->DEAR3(1)                                        --------->RAP2.6(2)                                        --------->RAP2.3(2)                                        --------->RRTF1(2)                                       --------->ORA47(2)                                       --------->RAP2.3(1)                                       <------NtERF2                                       --------->ATERF1(1)                                      --------->At4g35610                                      <---------At4g35610                                      --------->DREB2C(1)                                      <---------ATERF1(1)                                      ------>NtERF2                                      <------NtERF2                                      <---------DREB2C(1)                                     <---------DEAR3(1)                                     --------->DEAR3(1)                                     --------->RAP2.6(2)                                     <---------ATERF1(1)                              --------->MYB55(2)                              <---------REM1(1)                  --------->GLK1(2) <---------RAP2.6(2)                 <---------GLK1(2) --------->ATERF1(1)                         <---------ANAC46     -            <-------TEIL      <---------MYB46(3)                    ---------->DOF2                 <       --------->LBD16   <---------LBD16----------->RAV1(1)    <---------ARR14(2) <-----------HVH21-- ---TEIL   --------->CCA1(2)<<<<<<<<<<AtWER            --------->At4g35610     <---------ANAC58   === -->GLK1(1)--------->GLK1(2)<-------GAMYB------>NtERF2 --------->ZAT2          <---------ANAC58   <--   catagtctccgagattcaagaatcttatgcggttgtaggccgccgcacaagagaaacagctagcgaattcaaaagagtgtttcttgtcagagtccaagga  7690400  Previous    Next  AGI:  At2g17690.1    Description:  F-box family protein. Identical to F-box protein At2g17690 [Arabidopsis Thaliana] (GB:Q3EBY8); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G65760.1); similar to unknown [Populus trichocarpa] (GB:ABK93341.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 7689900    to: 7691165    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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