Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ------->PIF4        <-----------GT1 --------->AHL20(2)       --------->AHL20(2) <---------AHL20(2)     <----------DOF2 ---------AHL20(2)<-------MYC4 ------AHL20(2)   ------->MYC2                                                         <---------ARR14(2) ----->AHL20(2)   ------->PIF5                      ------>ZmHOX2a(2)                  --------->ARR14(2) ---->AHL20(1)    <-------MYC2                     <------ZmHOX2a(2)                  <---------MYB52(1) ---->AHL20(2)    ------->MYC3          --------->TOE2(3)                            --------->LBD16 -----AHL20(1)    <-------PIF4        <-------TEIL<---------ARR11(3)                <---------ANAC58 -----AHL20(2)    <-------MYC3     --------->At4g35610            <---------YAB1    <---------ANAC55(2) >AHL20(2)        <-------PIF5     <---------At4g35610       <----------DOF2        <---------ANAC58< -AHL20(2) ---------->DOF2<---------AHL20(2)      --------->ARR11(3)                --------->ANAC55(2)   tatttatttttcacaaagcacatgctctttaatttgtagctacataaatatagatcccataaacttttacaattgaaaatttgattccgtaacttctaca  7685700                                                                           <---------------AGL15                                                                           --------------->AGL15                                                                     --------->ATHB12                                                                     <---------ICU4                                                                    --------->ICU4                                                                    <---------ATHB12                                           <---------YAB1           <---------YAB1                                         <---------ICU4            <---------TOE2(3)                             <---------ANAC55(2) <-----------GT1 <---------AHL20(2) <---------TOE2(3)    --------->YAB1    --------->ICU4  <-----------GT1   --------->TOE2(3) -----------GT1<---------ZAT6----------->GT1<---------AHL20(2)  --------->AHL20(2)       <----------DOF2   tttaacattatgcattagtcttattcataatatgtaaatctaatttttattttactagtaacaatatttaatgatttcttaattttgaattcttttcaat  7685800                                                                                     --------->ARR14(1)                                                                                     --------->CCA1(2)                                                                                    --------->ARR11(1)                                                                                    --------->ARR14(2)                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)<-------TEIL  <                                                           <---------AHL20(2)       <---------GLK1(2)                                                           --------->AHL20(2)       <---------ARR14(2)                                                           <---------AHL20(1)      <---------HSFB2a(1)                                                           --------->AHL20(1)  ------->GAMYB        -                                                      <---------ATHB12         ======================                                                     --------->ANAC58         --------->ANAC46      -                     --------->ANAC58                --------->ANAC58       --------->MYB52(1)      -            <---------At4g35610                     --------->WOX13(1)    <---------ATHB12          <            --------->At4g35610----------->GT1    <---------At4g35610    --------->ANAC46           -   --------->MYB52(2)--------->ANAC58      <-----------RAV1(1)   <---------------------WRI1    <-----   attgttagtgactcttctgccagacccaatacatagaaaaatcaaatgttgcagcaatcaataaaatgccgatacaatcaacgaaagattcgactatttt  7685900                                                                                             --------                                                                              --------->CCA1(2)     --------->YAB1                                                           <------ZmHOX2a(2)   <-----------HVH21                                                         <---------AGP1  <------- ------->MYC4                                                                --------->ARR14(2) ------->MYC3                                                                <---------ARR14(3) <-------MYC2                                                                <---------ARR11(3)------ ------->MYC2                                                                --------->ARR11(3)------ <-------PIF5                                                                --------->AGP1  <------- <-------MYC4                                                                <---------ARR14(2)------ ------->PIF5                                                                --------->ARR14(3)------ <-------MYC3                                                                <-----------ARR10------- ---------TGA1a                                                            ----------->ARR10 <------- -------->TGA1a                                      <---------bZIP60(2) =============HOX2a_HOX2a =========MYC_MYB                                  <------ZmHOX2a(1)     <------ZmHOX2a(1)   <------- -------->ANAC55(2)                                ===================================HOX2a_HOX2a -------->ANAC46      <---------TOE2(3)            ==================================HOX2a_HOX2a ---------O2    --------->ARR11(3)            --------->ATHB12         <---------TOE2(3)  <---------- -------->O2    <---------ARR11(3)            --------->YAB1     <---------TOE2(3)      <----------DOF2 ------GT1--------->ZAT6                     <---------YAB1      <---------YAB1------>ZmHOX2a(2)   ccacgtgtcataacacaagatgttgaggctaatcagacaatataggtatgataggacgaggcataatatggttgaggaagatctgcatttctttacctac  7686000 ------------>CBF ->MYB46(3) --MYB111(2)               <---------AHL20(2)                       --------->ARR14(2) -->P                      --------->AHL20(2)                       <---------ARR14(2) >MYB46(1)               <---------YAB1                       --------->ALFIN1 --MYB59              --------->ICU4                        <-----------RAV1(1) >MYB83          --------->WRKY12                         <---------ICU4 --->MYB52(1)    ----------->HVH21                       --------->ICU4            ------->GAMYB -->MYB55(1)     --------->WRKY38(1)                   <---------ICU4           --------->MYB52(1) --MYB111(1)    --------->DOF5.7(2)                    --------->YAB1 <---------LBD16 --MYB46(2)     <---------MYB52(1)                    --------->AHL20(2)     --------->YAB1 -GT1          <-------GAMYB<---------AHL20(2)        <---------AHL20(2)--------->LBD16   *TSS   cgagacaattcatagaccgttgacattattttaattttagagtaatcgactatctattaattatgtggcgaaaccggaagcataacagtcgatgactcat  7686100                   <---------ANAC46              -------->ATHB1              --------->ATHB51                       <---------YAB1              <---------ICU4                       --------->YAB1             <---------ATHB51                      <---------ICU4                              ------             --------->ICU4                       <---------YAB1                          <----------ID1             --------->AHL20(2)                 --------->YAB1                         --------->MYB52(1)             <---------AHL20(2)        <----------DOF2                               --------->MYB46(3)   <-----------RAV1(1)    ----------->GT1    <---------ICU4                        --------->YAB1----   caactatgtggccaaattattacgcagaatgtgacaatcgactttaaaaattatcatgacaactcagaatcacacattttgcccataacaatcggacaaa  7686200                                              <-----------GT1                                       <--------P                                       <---------WOX13(1)                                      <---------ANAC58                                      <---------ANAC58                                      <-------GAMYB            <---------ARR11(3)       <------MYB46(1)        --------->AHL20(1)           <------MYB83        <---------AHL20(1)           --------->MYB52(2)     --------->AHL20(2)              <---------MYB46(3)   --------->AHL20(2) <---------MYB46(3)  <---------TOE2(3)                                       ---  --------->YAB1  <---------YAB1     --------->MYB55(2)        <---------YAB1              --------->ZAT14 ---->DOF2 <---------CCA1(2)        <---------AtMYB61    <---------TOE2(3)        --------->AHL20(2)< ------->GT1--------->ARR11(3)   <-----------RAV1(1) <----------DOF2       <-------GAMYB   <---------ZAT14   agtaaaataatatatatcttatatttgttgaagttttgttggttgatgttacaaacttttatgttataaatagagctcgttgaataaaatcagtatagag  7686300                                                                                        <---------At4g35610                                                                                        --------->ZAT14                                                                                        --------->At4g35610                                                                                 ====================                                                                          ==============HOX2a_HOX2a                                                                          ===========================                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                         ===============HOX2a_HOX2a                                                                         ============================                                                                        --------->ARR14(3)                                                                        <---------AGP1  --------->ZAT2                                                                        <-----------ARR10                                                                        <---------ARR14(3)                                                           --------->At4g35610   ------>ZmHOX2a(1)                                <---------YAB1       ===================================HOX2a_HOX2a                                --------->ICU4       ------>ZmHOX2a(2)  --------->ARR11(3)                              --------->YAB1        <------ZmHOX2a(2)   <---------ARR14(2)       <---                             <---------YAB1         ====================================HOX2a_HOX2a <                           --------->YAB1          <---------AGP1   --------->YAB1      <---------ZAT2 ----------->RAV1(1)      --------->ICU4           --------->ARR11(3)   --------->ARR14(2)     <----- --------------------->ANAC81--------->ICU4        --------->AGP1  <---------ATHB12     <---------ZAT14 ----------ID1            <---------YAB1           <---------ARR11(3)   <---------ARR11(3) --------->At4g35610   aaacaacaaaactcaaaccaatatggtgatgatgatgatcaagaaccatgtaagatctataagcttacaatcaagatctcatcctagcacagcagcgatc  7686400                                                                                          ------>ZmHOX2a(2)                                                                                          <----------                                                                                         <------ZmHOX2a(2)                                                                                        <-----------ARR10                                                                                        --------->GLK1(2)                                                                                        --------->ARR14(2)                                                           <---------MYB46(3)           --------->ARR11(3)                                                           <------MYB83                 <---------AGP1                                                           <---------DEAR3(2)           <---------ARR11(3)                                                   ----------->RAV1(2)                  <---------ARR14(2)                                                 <---------ANAC46                      ==============                                                --------->ATERF1(1)                <------MYB46(1)                                                <------NtERF2 <-------TEIL         <------MYB83                                              <---------ANAC58<---------ZAT14     --------->MYB111(2)        <---------ETT(2)                      <---------ANAC58<---------ZAT18     <---------AtMYB61 =HOX2a_HOX2a                                 <---------bZIP60(1)    --------->LBD16   ============== ======HOX2a_HOX2a                <---------O2--------->bZIP60(1)  <---------LBD16--------->ALFIN1 ======HOX2a_HOX2a     --------->ZAT6--------->ETT(2)      <------MYB46(1)       <--------P ------HSFB2a(2)      <---------YAB1 <---------ETT(2)     <---------DEAR3(1)<---------LBD16        <- ------ZmHOX2a(1) <---------ANAC58--------->ANAC46 <---------At4g35610 <----------DOF2 <------ZmHOX2a(1) -ZmHOX2a(2)      <---------ANAC58--------->O2<---------ANAC46--------->ZAT14   <-------GAMYB -------   gaggagtcgctcgacaaatttcttatcactatgaacacgtcgacaatggcgtcgtctgagtcggttcactccggtttatcggggttggaggatctgtacg  7686500           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         <-----------ARR10         <---------ARR14(2)         --------->ARR14(3)         --------->ARR14(2)         --------->ARR11(3)                  <---------ANAC46         <---------ARR14(3)                 ---------->ID1       ----------->ARR10               --------->ALFIN1                      ---------->DOF2 -----AtSPL3 --------->At4g35610 ---------->DOF2                 >>>>>>>>>TBF1 ================HOX2a_HOX2a  --------->ANAC46                   ------------------------>ANAC81 =================HOX2a_HOX2a --------->ANAC58                >>>>>>>>>TBF1 <------ZmHOX2a(1) --------MYB46(3)         --------->SPL7<-------GAMYB       ------------------------>ANAC81 -->SPL7 <---------ARR11(3)   --------->ANAC58      <---------ZAT6  >>>>>>>>>TBF1   actgttcggaagatcttctgaagatgggttcgacgcaaagggtgttgtcgtttagtgatgagaagaagaagaagaagaggaaagtgaagggagagtttat  7686600  Previous    Next  AGI:  At2g17680.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22785.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) Range:  from: 7686090    to: 7687460    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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