Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------At4g35610                                            <---------MYB59                             ---------->DOF2                                     ------>NtERF2                                <---------TOE2(3)   ------>NtERF2                   --------->LBD16                        <-----------ARR10--------->At4g35610   --------->LBD16                <---------LBD16                         <---------ARR11(3)  --------->RAP2.6(2)             <---------HSFB2a(2)                     --------->ARR11(3) <---------LBD16                  --------->HSFB2a(2)                ---------->DOF2<------ZmHOX2a(1) ---------->ID1                  <---------LBD16               ----------->GT1--------->At4g35610 --->ATHB12                     <---------LBD16         <---------ANAC46  <---------ARR14(2) ->ARR11(3)              <---------ZAT14    --------->TOE2(3)---------->DOF2  ----------->RAV1(2) --ARR11(3)       ---------->DOF2<---------ANAC46    ----------->HVH21    --------->ARR14(2)  -------   tttgccgcattacatggctccaaagactatagttttcggggacatacctaaaacctcgacggggaaagtacaaaagtatcttctgaggaagaaagctgat  7680000                                                                                                    -                                                                                                    <                                                                              <------ZmHOX2a(2)    --                                                                             --------->ARR11(3)------        <---------ANAC58                                            =================HOX2a_HOX2a  ---        <---------ANAC58          ---------->DOF2                   <------ZmHOX2a(1)  --------->YAB1        <---------ANAC46 --------->ANAC58                    ------->TEIL    <---------ARR11(3)<-----     <--------P          --------->ANAC58               <---------ANAC46 ---------->DOF2      ------- -->At4g35610        --------->AtLEC2              <-------TEIL    ----------->GT1   --------->GLK1(2)   gaaatgggtagcttgtaatcgccatgtaagaaacaaaaaagcttagtctctggttcatgtgtgtatgtaaggaaacaaagatcagagaatcataaaacca  7680100                                             --------->YAB1 --------->LBD16                  --------->ATHB12                      <---------ATHB12 ---------->GT1                  <---------YAB1                       --------->MYB52(1) ---------ANAC46               --------->CCA1(2)                     <---------WRKY12 ------->LBD16                <---------ARR14(2)                --------->SPL7 --->AtMYB61                  --------->ARR14(2)              --------->LBD16 ------>DEAR3(1)    <------ZmHOX2a(2)        <--------HAHB4  --------->ANAC46 ----ALFIN1        --------->ARR14(2)       --------->ICU4  <---------LBD16 -->MYB46(3)       <---------ARR14(2)       <---------YAB1 <---------ANAC46        <---------YAB1   ccgcgtgaaaatgaagaaacagatcagccatggatatgatttggctataattagatttgttacgcggaaggccaacgattttgttatttttgtgcctcag  7680200                                                 <---------ANAC46                                                 --------->O2                                                 ===============================================bZIP_DOF                                                 <---------TGA1a                                                 --------->TGA1a                                                 <---------O2                                                 <---------ANAC58                                                 --------->DEAR3(1)                                                 <---------ANAC58                                               --------->LBD16                                               ------>NtERF2                                             <---------LBD16                                          --------->KAN4(2)                          ---------->DOF2                                         --------->KAN4(1)                      <---------ARR11(3)                                         <---------HSFB2a(1)                    --------->ARR11(3)                                         <---------KAN4(1)                     <---------HSFB2a(1)                                         <----------TaMYB80                    --------->HSFB2a(1)                                         --------->HSFB2a(1)                <------ZmHOX2a(1)      <-                  ---------->DOF2       ---------->TaMYB80                <---------TOE1(2)        --                  =========================================bZIP_DOF       <---------TOE2(2)        <-              --------->AHL20(2)   ========================bZIP_DOF     --------->TOE1(2)      ------             --------->AHL20(2)    ---------->DOF2                     <---------ANAC58       <<<<<<< <---------ARR11(3)   ---------->DOF2   <---------KAN4(2)              <---------ANAC46       <<<<<<< --------->ARR11(3)   =====================================bZIP_DOF    <---------ANAC58   -----------   aaagattttaagacattaaaaaaagaaagaagtagccaaaagaatattccgccgtgtctgaaacgagtccatttcgtaggaagatttcaaagcacaatct  7680300 --------ANAC58                    --------->ARR14(2) ------->ANAC55(2)               <---------AHL20(2) --------ANAC58                 --------->AHL20(2)                                  --------->MYB46(3) --->YAB1                       <---------AHL20(2)                       ----------->HVH21 <<ARR2                     ----------->TBP           --------->GLK1(2)----------->RAV1(2) <<ARR1                     <---------YAB1           <---------GLK1(2) --------->At4g35610      <---- ->CBF     <-----------GT1--------->YAB1     ------>ZmHOX2a(1)  *TSS   <---------At4g35610     <-----   tacttatctgttttctctcttctctccattataaataaatctgcatcctgtgttagaatctttaaacaaaaccatctgacttatcaacaacaacaagagg  7680400                                         <---------ANAC46                                         <---------ANAC58                                    <---------ICU4  --------->ZAT2                               <---------WOX13(1)   --------->At4g35610      --------->LBD16                          <---------ANAC58          <---------ZAT2          <---------LBD16      >>>>>>>>>TBF1       <---------ANAC58 <------NtERF2                   <---------LBD16   >>>>>>>>>TBF1    <-----------GT1<---------ATHB51 <---------At4g35610  --------->GLK1(2)        --- --ZmHOX2a(1)    ----------->GT1------>ZmHOX2a(2)  ------->TEIL      <---------RAP2.6(3)         ---- -----ID1>>>>>>>>>TBF1 <----------DOF2   <---------ANAC58    --------->ZAT18<---------HSFB2a(2)------   acgaagaagaagaagaagattgttactttcttgatcgataatggcgtcgaatgaagctggaagggcattgccgaaattcggggaatgggatgtgaatgat  7680500         <------NtERF2         <-------GAMYB        <---------SPL7        <---------MYB46(3)       <---------ANAC46      <---------LBD16      <------NtERF2     ------>NtERF2     <---------ATERF1(1)     <---------RAP2.3(1)    <---------O2    --------->O2               <---------At4g35610    <---------DEAR3(1)         --------->At4g35610    <---------RAP2.3(2) --------->ARR11(3)   --------->ATERF1(1)  <---------ARR11(3) ----------->HVH21<---------LBD16      --------->LBD16          --------->GLK1(1) --------->DEAR3(1)  --------->At5g28300    ----------->GT1--------->SPL7 ------>TOE1(2)   <---------At5g28300 <---------DEAR3(1) ----------->HVH21 -->ZmHOX2a(2)  xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------SPL7                  <------ZmHOX2a(1) --->ARR11(3) --------->ARR14(2) ---------->DOF2  ---------->DOF2              --------->ARR14(2)  --   ccagcgacggcggatggattcacggtgatattcagcaaagccggtgaagataaaaagacgggacggagttcgacgaagacgaattcacagaggaaacaag  7680600                  --------->ANAC58                  --------->ANAC58        <---------ANAC58                                   ------->TEIL              <--------ZAP1               <---------ANAC58                        ------>ZmHOX2a(1)           --------->At4g35610       <---------DAG2            <-------GAMYB     --------->TOE2(3)          --------->MYB52(1)  <------------------------ANAC81 --------->MYB52(2) --------->TOE2(2) <---------YAB1--------->WRKY18(1)   <----------DOF2          <---------MYB46(3) --------->TOE1(2) --------->GT1<-----------HVH21   <-----------GT1<----------DOF2                --------->YAB1  <----   atggtgataaaccagcggtcaagaaatggctctgtttcacttttgcttaatcttttttttttgtttgttgagtaagttttaatcctaagagaatgtagct  7680700                                                                             <---------TOE2(3)                                                                             <---------TOE1(3)                            <---------ZAT6                              --------->GLK1(2)     -------                ----------->HVH21                                      <---------GLK1(2)      -------   <---------DAG2      <----------DOF2        <---------ANAC58  --------->AHL20(2)           <------- ------DOF2   <----------DOF2                 <---------ANAC58  <---------AHL20(2)      --------->TOE2(3)   ttgagccttatgagccctttgacaacttttgtgttagaacatttcatttcgtttttagttatctaataaaacaaattctgaggttttgtttcttaatgat  7680800                                                                                     <---------ARR11(3)                      --------->GLK1(1)                                     --------->ARR11(3) -->YAB1              <---------GLK1(1)                                 ---------->DOF2    <---------TOE2(3) ->HAHB4   <------MYB46(1)                      ---------->DOF2   --------->AtLEC2   --------->ARR11(3) --YAB1    <------MYB83                 <---------MYB46(3) ---------->DOF2  <---------ARR11(3)   aaatctctgcatttggtcatttggaaatcaacaaaattgtagttgttgattaaagaattgcaaaagtcatacaaaaaaggtctcttagatattgaggtga  7680900  Previous    Next  AGI:  At2g17650.1    Description:  AMP-dependent synthetase and ligase family protein. similar to AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana] (TAIR:AT1G20560.1); similar to Putative AMP-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05508.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49648.1); similar to Os03g0133500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048876.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) Range:  from: 7678098    to: 7680118    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g17660.1    Description:  nitrate-responsive NOI protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35655.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45143.1); contains InterPro domain Nitrate-induced NOI (InterPro:IPR008700) Range:  from: 7680364    to: 7680794    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version