Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------DAG2    <----------DOF2            ---------->DOF2 <---------AHL20(2)      --------->GLK1(2)  <---------ZAT6                <---------At4g35610 <-----------GT1     --------->YAB1     ---------->DOF2         --------->TOE2(3) ---->HVH21       --------->YAB1  <---------At4g35610           --------->TOE1(3)             -------   catttactttatctgaacaagaataagaatcgatgaagcagagaaagtgttagaatttgagggaaacctcaagtttagcttcttctcttatagcatccca  7677200                        <---------ARR14(2)                   --------->ANAC58                   --------->AtLEC2                  --------->WOX13(1)               --------->ARR11(3)              <------ZmHOX2a(1)                            <---------ANAC46    <------ZmHOX2a(2)   --------->ARR14(2)                 <---------ANAC58              --------->At4g35610    =================HOX2a_HOX2a                           <---------ANAC58              <---------At4g35610  =====================HOX2a_HOX2a                     <---------MYB52(1)         ---------->DOF2  <------ZmHOX2a(1)--------->ANAC58              <---------GLK1(1)             <---------HSFB2a(2) ---------->AGL1<------ZmHOX2a(2)             <---------YAB1             --------->MYB46(3) ---------   aataggatcagaacgaggatcaagcaaattcgagtcaaactctgacttatgagttcccttagcgtaaacctcgaaaccactctcgaaaggaagctcatcg  7677300                                                                                   --------->DAG2     <---------ARR11(3)                                                           ---------->DOF2     <-----------ARR10                                   ---------->DOF2     --------->ANAC58     --------->ARR11(3)                           <---------WOX13(1)         --------->ANAC58    <---------CCA1(2)                          <---------YAB1                ----------->GT1  --------->YAB1                  --------->YAB1--------->ATHB12           ---------->DOF2    <------ ->CDC5                 ---------->DOF2    <----------DOF2          --------->CCA1(2)         -------   ccattcatatctctccaaggagacgataaagaagaatcacaaactctttttgattggacaaaagagagagagacggagaaagcaaaaaggaggctacttt  7677400                                                                                     <------MYB83        <---------YAB1                                                  <---------At4g35610     <---------YAB1                                                 <---------MYB46(3)   --------->CCA1(2)                                               <---------AtMYB61 <------MYB46(1)  --------->ARR14(2)                                     --------->ARR14(2)  <---------MYB46(3)  <---------ARR14(2)         <---------DAG2              <---------GLK1(2)<-----------RAV1(1)      -- ----DOF2                    <----------DOF2             <---------ARR14(2)<-------GAMYB         <--- -->TOE2(3)     <----------DOF2  <---------AHL20(2)    <---------ZAT18 <---------DEAR3(1)        ----   aatggatatgatgagaaactttgagaaacccctttttaatctattttgttttcttagtggattctctcgatggtcgctgttgttgtttggtttctcgttg  7677500                                                                                            <--------                          <---------ALFIN1                                                 <---------ANAC58              <---------ANAC58                                                             <---------ANAC58              <---------ANAC58      <---------AtLEC2                                 <-----------RAV1(1)            <---------ANAC46    --------------------->WRI1                     <---------AHL20(2) <--         <-----------RAV1(1)    <----------DOF2                               --------->ARR11(3) <--- ---->ZmHOX2a(2)         --------->ETT(2)                                     <---------ARR11(3) ---- ------ARR11(3)          --------->ZAT18                     <---------CCA1(2)<---------AHL20(1)----- ----->ARR11(3)        <---------ZAT18                <---------ICU4         *TSS<---------AHL20(2)   atcttgtgtttgtgttgtgttccagtgtccaccgctttgaatggttctacttctactaatttcatatcatttcatttgtatatatttttgttggctttgg  7677600                  <------------CBF               --------->At5g28300 --DOF2  <------NtERF2                  <---------YAB1                                           ---- -------DAG2------>NtERF2             --------->YAB1                                             <--- --------------AGL1                  --------->ICU4                            ---------->DOF2------- ------------->AGL1                 <------------CBF             <------------CBF        ------>ZmHOX2a(2) ----->ID1----------->HVH21    <-------TEIL          <----------DOF2      <---------AHL20(2)  -------   ccttatctggtcgcgaccgtaattgagtccaagttcgtaattgtgattagggtctctttaatcagataattgttttttaatcaaagagggatcgaataat  7677700                                                                             ----------->RAV1(1)                                                                           --------->MYB46(3)                                                                          <------ZmHOX2a(2)                                                                         <---------ARR14(2)                                                                         --------->ARR11(3)                                                               --------->ANAC58                                                     ------->TEIL        --------->ARR14(2)       <---------TOE2(3)                             <---------YAB1      <---------ARR11(3) ----->AHL20(1)                         --------->ALFIN1       --------->ANAC46 ------AHL20(1)                      --------->HSFB2a(2)       --------->ANAC58       <---------ICU4 -->YAB1                             <---------HSFB2a(2)<---------------AtSPL8    --------->AHL20(2) -->AHL20(2) <---------YAB1    <---------CCA1(2)  <---------YAB1         --------->AGP1   attttttataagattactatagttcttaatcgtatacctcgagagggggaatatgaatattgtacaaggaagatagatccaccataaattatgccaactt  7677800                                                           --------->ZAT18                                                           <---------ZAT18                                                          <---------ANAC46                                                          --------->ANAC55(2)                                                          <---------ANAC55(2)                                                          <---------ANAC58                                                          <---------ANAC58                                                         --------------->AtSPL8                                                        <---------ANAC46                           --                                   <---------AHL20(2) <-----------HVH21                <---------ATHB12      <---------YAB1              --------->YAB1   <---------ANAC46                   --------->ANAC58   <---------YAB1              --------->AHL20(2)  <---------bZIP60(2)                --------->ANAC58  <---------TOE1(2)            <---------AHL20(2)  <---------ANAC58           <---------AHL20(2) <---  <---------TOE2(2)      --------->YAB1            <---------ANAC58     ------>ZmHOX2a(1)       -----   gtcttatgtttatagcatatttctctatagtatttatattaatgtctcttgtgacttgtcgcgtactaaaactcctatatgaaattgcaagcattcaatt  7677900                                                                                       --------->ZAT2                                                                                       <------NtERF2                                                                              --------->YAB1                                                                           --------->WOX13(1)                                                                         <---------MYB52(1)            --------->ARR14(2)                                          --------->TOE2(3)            <---------ARR14(2)                                          <-------GAMYB  <---------At4g35610           <---------GLK1(1)                                           --------->MYB52(2) --------->ANAC58       --------->AHL20(2)                                             --------->SPL7   <---------ZAT2       <---------AHL20(2)                                       <---------ALFIN1<---------O2       -- -------->DOF2                                       ----------->GT1 <---------MYB52(1)--------->At4g35610 ------AHL20(2)    <---------AHL20(2)        <-----------GT1    --------->ANAC46--------->O2     ---- ---->AHL20(2)   <---------MYB52(1)      --------->ICU4 ---------->DOF2<---------MYB46(3) --------->ANAC58   taaaagtatatatatatccgttaaattgaatttgaaacttgtaatgttttccattcagtaaatcacacaccgttcgttaatcacgaggcagcacgactgt  7678000                                                                       ------------>CBF                                                                 ---------->DOF2                     ------->GAMYB                          ------------>CBF                  ----------->RAV1(1)                       <-------TEIL          <---------GLK1(1) --------->YAB1                 --------->CCA1(2) <---------AHL20(2)   ---     --------->At4g35610  --------->GLK1(2)               --------->ARR14(2)<---------AHL20(2)    *TSS ------->ICU4    --------->ANAC46                         <---------ARR14(2)<---------AHL20(1)   ---- ----->YAB1    --------->ANAC46                      ----------->RAV1(1)    --------->AHL20(2)-------   cattatctgatgagttcccacaacagagaatcatcaaactcgtcttgataaacttcaacagatacaataaagtttcaattttttttgagaagtcgaacaa  7678100  Previous    Next  AGI:  At2g17640.1    Description:  AtSerat3;1 (SERINE ACETYLTRANSFERASE-106); acetyltransferase/ serine O-acetyltransferase. Identical to Serine acetyltransferase 2 (SAT2) [Arabidopsis Thaliana] (GB:Q8S895;GB:Q9STB0;GB:Q9ZPJ4); similar to ATSERAT3,2 (SERINE ACETYLTRANSFERASE 3,2), acetyltransferase/ serine O-acetyltransferase [Arabidopsis thaliana] (TAIR:AT4G35640.1); similar to Putative serine acetyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAN05506.1); similar to Os03g0133900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048879.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Serine ace Range:  from: 7675160    to: 7677577    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g17650.1    Description:  AMP-dependent synthetase and ligase family protein. similar to AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana] (TAIR:AT1G20560.1); similar to Putative AMP-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05508.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49648.1); similar to Os03g0133500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048876.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) Range:  from: 7678098    to: 7680118    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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