Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                               --------->GLK1(1)     ------>ZmHOX2a(1)                                                           <---------ANAC46          ================                 <----------DOF2                --------->GLK1(2)                    ================                 <---------ARR14(2)      --------->ANAC55(2)   <---------GLK1(1)--------->YAB1   ----              <------NtERF2            --------->MYB52(1)  <---------HSFB2a(2) <---------ATHB12  ----          <-----------HVH21          <----------DOF2  <---------MYB46(3)       --------->ICU4   <----   <-----------GT1                   <---------DAG2<-----------RAV1(1)  --------->CCA1(2)      <----- ->GT1--------->TOE2(3)   <---------YAB1<---------LBD16  <---------ANAC46  <-------TEIL   <---------CCA1(2)   attgtttaccttcgtcgcggtttttgtgatgagagaaaactttacgggagaaactgttgttgtggaaatcgaagagatgcaataatcctcccatttctcc  7644300                   <---------ANAC46         <------ZmHOX2a(2)         --------->GLK1(1)         <---------GLK1(1)                                                              --------->At4g35610        --------->ARR14(3)                                                              <---------At4g35610        --------->ARR11(3)                                                     --------->At4g35610        <---------ARR11(3)                                                  <------ZmHOX2a(2)        --------->ARR14(2)                                                  <---------At4g35610        <---------ARR14(2)                                                  --------->CCA1(2)        <---------ARR14(3)                                                 <---------AGP1       --------->GLK1(1)                                                   --------->AGP1       <---------GLK1(1)                                                   --------->ARR11(3) <-------GAMYB   --------->ZAT14                                           <---------ARR11(3) ---------MYB46(3) ----------->GT1                                         --------->ARR14(2) ================HOX2a_HOX2a                                               <---------ARR14(2) ===============HOX2a_HOX2a        --------->AHL20(2)                     --------->GLK1(1)       <-- ----->LBD16     <---------ZAT14 ----------->GT1              ----------->GT1------>ZmHOX2a(2)    <-- -->NtERF2  <---------LBD16--------->AHL20(2)  ====================================HOX2a_HOX2a <----- -----DEAR3(1)--------->LBD16  ---------->DOF2 =====================================HOX2a_HOX2a------ ----LBD16------>ZmHOX2a(2)<---------AHL20(2)  <------ZmHOX2a(1)          <---------GLK1(1)    ------   ggcgattggagatctccggtgaagtgaaattaaaaaagaaaataagagaggatgagaaattggatagttcaaacagagatctgatgactcatcagagaat  7644400 --------ID1                                  ---------->DOF2 -------ETT(1)                             <----------DOF2                               ----------->GT1 ----ARR14(2)                       ------->TEIL                                     <---------ZAT14 --->GLK1(2)<---------ZAT14      <---------YAB1       ---------->DOF2                --------->ZAT14 --->ARR14(2)        <---------ARR14(2)  ---------->ID1       <----------DOF2  --------->MYB52(1)   ccgacaagagagagtgaagttcggaaactggaactatgaatttgtctttaaagagagaaagaaactttattaagacagacaaaacagaacagagtaataa  7644500                                                   <---------HSFB2a(2)                                            --------->GLK1(2)      --------->YAB1                                       ---------->DOF2             --------->AHL20(2)       --------->GLK1(2)            --------->ANAC46     ----------->GT1      --------->ARR14(2)            --------->ANAC58    ------------------------>ANAC81      <---------ARR14(2)            --------->ANAC58  ---------->DOF2                               -      <---------GLK1(2)           <-----------GT1  --------->HSFB2a(2)                      <--------   gagagacagattctgaaacagaacagaaacaggtttttacgcaaagaatcgatcgagaaaggaaacaaataatatcagaaatggaattgtcttctcgtga  7644600                                                       --------->ALFIN1  <---------ATHB12              <------ZmHOX2a(1)>>>>>>>>>TBF1 -------->WOX13(1)    <---------ARR14(2)      >>>>>>>>>TBF1                 ---------->DOF2 -ANAC46  ----------->GT1   ---------->DOF2>>>>>>>>>TBF1<---------LBD16    <------ZmHOX2a(1) *TSS   atcaatgaagcatcgaaaaatggagattgggaaaggatgagagaagaagaagaagaattgggggagagaagaacagaggaaagtcgttttcagacagaga  7644700                                                                                           <---------                                                                                      <-----------HVH21                                                                                   <---------LBD16                                                                                --------->GLK1(1)                                                     --------->ANAC58           <---------GLK1(1)                                                     --------->ANAC46          <---------ARR14(2)                                                     --------->ANAC58          --------->ARR14(2)                                  --------->ICU4   --------->MYB52(1)       <---------ANAC55(2)                                --------->ATHB12 <---------MYB52(2)         --------->ANAC46                                <---------MYB46(3)----------->TGA1          --------->ANAC58                             ----------->GT1    <---------At4g35610         --------->ANAC58                 >>>>>>>>>TBF1 <---------YAB1   --------->At4g35610         --------->ANAC55(2)    <-              >>>>>>>>>TBF1  --------->YAB1<---------TOE2(3)               <---------LBD16 <---------DAG2           >>>>>>>>>TBF1  --------->MYB52(1) <------ZmHOX2a(1)        ---------->DOF2 <---------MYB52(1)   gagagagagagaagaagaagaagaagactaatggtgattagtagtaaggaaactgacgaaacacatctcatccaaagtacggaactccggtcgctttctc  7644800                                                                                                    <                                                                                                    -                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                -----                             --------->ANAC58            --------->ALFIN1                       <----                             --------->ANAC58           ------->MYC3                           <-----                           --------->MYB52(1)           <-------MYC3                          -------                      ----------->GT1                  <---------O2  --------->YAB1           <------             ----------->GT1 --------->ANAC46          <---------ANAC46                     ---------     --------->CCA1(2)--------->YAB1     <---------At4g35610        <---------ATHB12       <---------ANAC46 -DOF2 <---------YAB1----------->GT1   <---------HSFB2a(2)      <-------TEIL              <---------LBD16 ---------DOF2       <---------YAB1    --------->HSFB2a(2)     --------->GLK1(2)  <---------ARR14(2)-   acttttgatatgagagagagaaaatgataaaacggaattttgcagaagagagaagaaacgtggagattcaatgataaaacagagtattcttctccgggta  7644900      --------->ARR14(2)    <---------MYB46(3) <---------ANAC58 <---------ANAC58 <---------TOE1(1) -------TEIL ------>TEIL ------>TOE1(2) -------SPL7 ----->ANAC58 ----->ANAC55(2) ------ANAC55(2) ----->ANAC58                                                   -------->HAHB4 ------ANAC58                                 <---------YAB1    --------->ATHB51     <---------ANAC58 ------ANAC58                               <---------ICU4      <---------ICU4       <---------ANAC58 ---------->AtSPL3                          --------->YAB1      --------->YAB1  <---------ICU4 ---->SPL7        --------->At4g35610      --------->ICU4       <--------ATHB1  --------->ATHB12 ---TEIL   <-----------HVH21               <---------YAB1      <---------ATHB51 --------->ATHB51 ---P <---------ARR14(2)                 <---------ICU4        <---------AHL20(2)   <---------MYB46(3) -->ARR14(2)     --------->DEAR3(1)      --------->YAB1        <---------YAB1  --------->ICU4 ---ARR14(2)   <---------At4g35610      --------->ICU4         --------->ICU4  <---------YAB1 >LBD16   ------>ZmHOX2a(1)             <---------YAB1     --------->AHL20(2)--------->YAB1        -- -------->SPL7 --------->At4g35610   --------->ICU4      ----------->GT1    <---------YAB1     <-----   cgtacgtggttcctgtgagccgctccaaaatttttagtagttattattattatgttccaaagttaataattgttgattttcattattggttgagtttttt  7645000                                                                --------->ATHB51                                                                <---------ICU4                                                                --------->ATHB12                                                               <---------YAB1                                                               --------->ICU4                        <---------ICU4                 --------->ATHB51              <---------YAB1                           --------->ATHB12                      --------             --------->TOE2(3)                         <---------ICU4                       <--------            --------->YAB1                            <---------YAB1                       --------->ARR11(3)            <--------HAHB4                          --------->YAB1               ---------->DOF2           --------->ICU4        <---------TOE2(3)  <--------HAHB4         <---------ANAC55(2)        <---------MYB52(1)<---------YAB1           <---------YAB1          --------->ANAC55(2)      -    <---------At5g28300<---------YAB1  ----------->GT1--------->ICU4 <---------YAB1        <---------ARR11(3) ---->ZmHOX2a(1)       --------->ICU4---------->DOF2<---------ICU4 ----------->GT1       --------->ICU4 ------GT1 <---------YAB1<---------AHL20(1)  <-----------GT1<---------YAB1 ----------->GT1--------->YAB1   cctgttaaccgttatcattaatctcattattttttaagaaaaagaaataacttatcattattgtcattattgtgaataagtaacaaagaaaatgatcatc  7645100             <---------AHL20(2)            --------->AHL20(2)            <---------AHL20(2)            <---------AHL20(1)   -------->ATHB1                     <------MYB83   --------->ATHB51                   <------MYB46(1)   --------->ATHB12                  --------->MYB59                                         <-------  --------->ICU4                     --------->MYB46(2)                      <---------ARR11(3)  <---------YAB1      <---------MYB52(1)   --------->YAB1     <---------AHL20(2)          ------->TEIL ->YAB1     --------->AHL20(1)       <---------MYB46(3)      <---------AHL20(2) <---------DAG2      - -YAB1     --------->AHL20(2)        --------->MYB111(2)     --------->AHL20(2) <----------DOF2   --- -------->YAB1   <-----------GT1     --------->MYB111(1)     --------->ICU4 <------ZmHOX2a(1)--------   aagaattattgaaattaattttctgttttttttgtttgtttggtagcataaatgttttgagtattaattagtttggcaggacctttttcatgtatatata  7645200  Previous    Next  AGI:  At2g17550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14481.1) Range:  from: 7641365    to: 7644693    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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