Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ZAT2                                            <---------ZAT2                                            <---------At4g35610                                            --------->At4g35610                                           ------>NtERF2                                          <xxxxxxxxxxxxxxxxsmallRNA(s)                                        --------->ABI4(1)                                       --------->ANAC46                                       --------->DEAR3(1)                                     <---------At5g28300                                     <---------ATERF1(1)                                    <---------WRKY38(1)                                    <---------WRKY12                                                <                                  <-----------HVH21                                                 -                           --------->At4g35610 ---------->CDC5                                      <                           <---------At4g35610---------->DOF2                                 -------                         ---------->CDC5------>NtERF2<---------MYB46(2)                      <-------   <------NtERF2       <----------CDC5--------->MYB46(3)                                 --------->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->DREB2C(2)     --------->TOE2(3)         <---------AHL20(2)   taggcctcgactaagcgttctatgcgctaagcggagggtcaccgccagctaagcgcctaacattttcttaaacactgaaataaacacaaaattatatgat  7623900     <---------YAB1                                                                               <-- ---------------AtSPL8                                                  <----------DOF2       <------ -------------->AtSPL3   <-----------TGA1                     <---------WOX13(1)             <------- ---------------AtSPL3  --------->YAB1                     <---------YAB1      ---------->DOF2------- -->YAB1            <---------AHL20(2)                ------->TEIL     --------->TOE2(3)     -------- --YAB1           --------->YAB1 <---------ICU4   <---------TOE2(3) <-----------GT1    ----------->GT1   aagaagtacgattaaaccaaaaataatcgtcacaatttttgccactatgtctaatgtatatgtgattgttttacctttaacaaaagaaaatgtgatttat  7624000     <-----------GT1  <----------DOF2 --------->TOE2(3)                     ----------->GT1 ---------GT1                   --------->ZAT6 ---AHL20(2)                    --------------->AGL15 --AHL20(2)                     <---------------AGL15 -->AHL20(2)          ---------->ID1 --------->ICU4  <---------RVE1(1)            --------->DAG2 ->AHL20(2) <---------YAB1    <-----------GT1     <---------ZAT6                ---------->DOF2     -   ttacctttaacaatatgaaaatttgttttttttaacacaattagtaattttagtgatattttcactcgaatttgttgatagcaaaaggtgtttagaagac  7624100                                                                         ------>ZmHOX2a(1)                                                                        --------->TOE1(3)                                                                     --------->ARR11(3)                                                                     --------->ARR14(3)                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                     <---------ARR11(3)                                                           --------->ZAT18                                                           <---------ZAT18                                                         <------NtERF2<------ZmHOX2a(2)                               <------NtERF2       <---------ZAT14  --------->HSFB2a(1)                              --------->RAP2.6(2)  --------->SPL7   --------->GLK1(1)                       --------->ZAT2              --------->ZAT14 ----------->ARR10              <---------ARR14(2)         <---------ZAT2 <---------MYB46(3) ---------->DOF2              --------->ARR14(2)         --------->At4g35610    --------->ANAC58   ------>NtERF2             <XXXXXXXXXXXXXXXXXXXXMIR171B/C      <---------SPL7 --------->ANAC46  --------->DEAR3(1)       --------->MYB52(1)   ------>NtERF2--------->ZAT2--------->ALFIN1------>ZmHOX2a(2)    --------->TOE1(3)  <---------ZAT2    <---------At4g35610    --------->ANAC58--------->At4g35610 --------->DAG2      <---------DEAR3(1) --------->MYB52(2)<---------PCF2--------->TOE2(3)       <---- --------->DOF2 <XXXXXXXXXXXXXXXXXXXXMIR171A ------------------>SPL14<---------ARR14(3)         -----   caaaaagcttaacgcatattggctcggctcggccgaataagttagctggacagtacggtggggcacacgaagatccttaaaccgcagcctcagacaaacc  7624200                              --------->ALFIN1                            <---------ANAC58                            --------->MYB52(2)                            <---------MYB46(3)                            <---------ANAC46                                    <---------AHL20(1)                            <---------ANAC58                                    <---------ARR11(3)                        --------->MYB52(2)                                      --------->AHL20(1)                        <---------ANAC58                                        --------->ARR11(3)                        <---------MYB46(3)                                    --------->AHL20(1)     --------->ANAC58   <---------ANAC58                                      <---------AHL20(2)     --------->ANAC58  <-------TEIL                                           <---------AHL20(1) <---------HSFB2a(2)<---------MYB46(3)                                     <---------AHL20(2) --------->HSFB2a(2)<------MYB46(1)                                 <-----------GT1         *TSS   <- -----MYB59         <------MYB83   ----------->GT1               <---------AHL20(2)<---------AHL20(2) ---->TOE2(3)      --------->MYB59----------->GT1       <----------DOF2    --------->AHL20(2)     ---   ttactcgaagcaaaacagtgtttggttcgttcgtgggggtttaaaaaaaaaaaaaaaacttttgtatttttttccattaaaatatttttttgttaagaag  7624300                                                                                     ------>NtERF2                                                                                    --------->DEAR3(1)                                                                         ------>ZmHOX2a(2)                                                                       <---------ARR11(3)                                             <------ZmHOX2a(1)         --------->ARR11(3)                                             ===================================HOX2a_HOX2a                                    <------NtERF2                      --------->ARR14(2)                                   ------>NtERF2         <---------SPL7<---------ARR14(2)                                  <---------PCF2         --------->LBD16<------ZmHOX2a(2)                                 <------NtERF2           ----------->HVH21        --------->At4g35610                                <---------MYB46(3)      --------->DEAR3(1)   ---------->DOF2  ---------->DOF2          <---------TOE2(3) ==================================HOX2a_HOX2a ------TEIL   <-----------HVH21--------->ALFIN1        <---------LBD16--------->GLK1(1) ------>CCA1(2)           --------->MYB52(1)----------->GT1           <---------GLK1(1)        ------   attcaaaaggagaacgcgttagacacactaagggtgggggcaagggaggagaaactcgccggacagagacggagatccctaaaccgcagcctcagactaa  7624400                                        ----------->GT1                                       --------->MYB59                               --------->ZAT14                               <---------ZAT14                          --------->WRKY38(1)                          --------->WRKY45                         --------->DOF5.7(2)                  <------ZmHOX2a(2)    <---------TOE2(2)               <---------CCA1(2)         <---                 <---------ARR14(2)    <---------TOE1(2)            <----------DOF2            ------         <---------CCA1(2)--------->WRKY12                      <---------CCA1(2)             <------ ---->DOF2       --------->ARR14(2)    <---------TOE2(3) <----------DOF2           --------->TOE2(3)   agcttcgcatcttatctccgatccatcgttgacttcactcttaggtaaattcgaaaaccctttctcttatcttttatctcccaattcttaaattcgatga  7624500                                                                           ==========================                                                                           ==========================                                     --------->YAB1                        <---------LBD16                                     <---------ICU4                        ------>ZmHOX2a(2)                                  --------->YAB1                      <---------WOX13(1)  ------>NtERF2                                  <---------ICU4                    <---------ICU4       --------->DEAR3(1)                               <---------ICU4                       --------->ATHB51    <------NtERF2                         <---------ZAT2                             --------->ATHB12   ------>NtERF2                         --------->ZAT2 <---------ICU4             --------->ICU4      <---------At4g35610                         --------->At4g35610                       <---------ATHB51   --------->DEAR3(1)                     <-----------GT1<---------YAB1                 <---------YAB1     --------->ATERF1(2) ------WOX13(1)<---------MYB52(1)<---------YAB1            <---------ARR14(2)         <---------ATERF1(2) --->ATHB12------>ZmHOX2a(1)   --------->YAB1              --------->ARR14(2)  --------->SPL7      -- ---YAB1------>ZmHOX2a(1)<---------At4g35610               <---------GLK1(2) --------->LBD16       <-   ttgactcgtcctcctctgttttttcacagctgatcatcatcatcatctctatctctgttcggattctccataattgatccggaccatgccgccgagatgt  7624600                                                                         <------NtERF2                                                                        ------>NtERF2                                                                       --------->DEAR3(1)                                                                      --------->DEAR3(2)                                                                      --------->ATERF1(1)                                                                     <---------ATERF1(1)                                                                     ------>NtERF2                                                                     --------->At4g35610                                                                     <---------At4g35610                                                                    --------->DEAR3(1)                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                  --------->At4g35610                                                                  <---------At4g35610                                                                  ------>NtERF2                                                                  --------->ABI4(2)                                                                  <---------DEAR4(2)                                                                  <---------ATERF1(1)                                                                 --------->DEAR3(1)                                                                 <---------DEAR3(1)                                                                --------->RAP2.3(1)                                                                <------NtERF2                                                                --------->ATERF1(1)                                                               ------>NtERF2                                                               <---------ERF1                                                               <---------ATERF1(1)                                                               <---------ORA47(2)                                                               <---------RAP2.3(1)                                                               <---------DEAR4(2)                                                              <---------RRTF1(3)                                                              --------->ALFIN1                                                              <---------RRTF1(2)                                                              <---------RAP2.3(2)                                                              --------->ATERF1(2)                                                              <---------ATERF1(2)           ---------                                                              --------->DEAR3(1)            <--------                                                              <---------DEAR3(1)            ---------                                                              <---------RAP2.3(3)           <--------                                                             <------NtERF2                  ------>ZmHOX2a(2)                                                             <---------ABI4(1)             <------ZmHOX2a(2)                                                             ------>NtERF2                <---------MYB52(1)                                                             --------->ATERF1(1)     --------->ARR14(2)             <----------DOF2                                <---------ATERF1(1)      <---------ARR14(2)       --------->LBD16                                      <---------RRTF1(1)       ------->TEIL       ------>NtERF2                                        <---------RAP2.3(1)   <---------bZIP60(2)      --------->ANAC58                                      <---------ERF1        --------->ANAC55(2)      --------->ANAC58                                     <---------DEAR3(1)     <---------ANAC58      --------->ANAC46                                     <---------RRTF1(2)     <---------ANAC58      --------->DEAR3(1)                                   <---------RAP2.3(2)    <---------ANAC55(2)     <---------LBD16                                       <---------RAP2.6(2)    <---------ANAC46    ------>ZmHOX2a(1)                                      <---------RRTF1(3)     <---------O2 ==========HOX2a_HOX2a                                     <---------ANAC46    ----------->HVH21 =====HOX2a_HOX2a                                          <---------RAP2.3(3) ----------->TGA1 ---->ZmHOX2a(1)                              <------ZmHOX2a(2)<---------RAP2.6(1)<---------ANAC55(1) ---------DOF2             <---------YAB1    --------->ARR11(3)<---------RRTF1(1)----------->STF1   cctttcctccgccatcttttcttcttactactattactctcaccatggatcatgtctccttgcggcggcgctgccgacgatgtgacgtatccgatcgttc  7624700                 <------ZmHOX2a(2)               --------->At4g35610             <------NtERF2            <------NtERF2            --------->At4g35610            <---------At4g35610         ------>NtERF2        ------>NtERF2        --------->LBD16             <---------MYB46(3)        <---------ATERF1(1)         <---------DEAR3(2)        --------->ANAC46           <---------At1g77200      <---------LBD16        <---------GLK1(2) >HSFC1(2)  --------->LBD16  --------->ARR14(2) -HSFB2a(1)--------->RAP2.6(2)     <---------DEAR3(1)     <---------AtLEC2                    ------- >HSFB2a(1)----------->RAV1(1) <-------TEIL           ------>ZmHOX2a(1)                     <-------- -MYB46(3)--------->SPL7     <---------ARR14(2)       --------->At4g35610            <---------AHL20(2)   catctagtcccggccgcagatcaattttgcagattcgtcggtgagtttcttccatcctctgcatgtttaaaaatacttagttagtatttgattctggtga  7624800  Previous    Next  AGI:  At2g17520.1    Description:  IRE1A (Yeast endoribonuclease/protein kinase IRE1-like gene); kinase. similar to protein kinase family protein / Ire1 homolog-1 (IRE1-1) [Arabidopsis thaliana] (TAIR:AT5G24360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66262.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Ribonuclease L; (InterPro:IPR010513); contains InterPro domain PUG (InterPro:IPR006567) Range:  from: 7624292    to: 7628191    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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