Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->HSFB2a(2)                                 --------->HSFC1(2)                                 <---------HSFC1(2)                                 --------->HSFB2a(1)                                 <---------HSFB2a(1)                         --------->YAB1              <----------DOF2  <---------ARR11(3)        <---------MYB46(3)   --------->ANAC58            <-----------GT1 ----DAG2     <---------DAG2 --------->ANAC46      <---------YAB1 -----DOF2<---------MYB52(1) --------->ANAC58<---------YAB1      <---------ANAC46                 <--   tttgtatcatcggttactttttttttatcacaagaaatttctcgattttgattttgatttttcaatgttgtgaagttgagaagttcaacatgttttggac  7613400                                                                 --------->At4g35610                                                               <---------ANAC58                                                               <---------ANAC46                                                               <---------ANAC58                                                             <-----------HVH21                                                            --------->ALFIN1                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                          <---------ANAC55(1)                                                          --------->ANAC55(2)                                                          <---------ANAC58                                                          <---------ANAC55(2)                                                          <---------O2                                                          <---------ANAC58                                                          <---------ANAC46                                                          --------->O2                                                          --------->TGA1a                                                          <---------bZIP60(2)                                                          <---------TGA1a                                                         ----------->STF1                                                  --------->ANAC55(1)                                                  --------->ANAC55(2)                                                  --------->ANAC58          <---------ANAC58        -            --------->At5g28300                   --------->YAB1 <---------At4g35610     <---------AHL20(2)           ----------->GT1                        --------->ANAC58          <---------ANAC58 --------          --------->ZAT6             --------->GLK1(2) ----------->TGA1     <---------ANAC46 <------- -------At4g35610                    ------->TEIL --------->ANAC46 ----------->HVH21  --------->MYB52(2)   agatgtttttgaacagtaaattagtattttaaacatgtgaatctatttgcaaacgtaatgacgtgtcgtctgaccatttcttgaatgttagttaattttt  7613500                           <------MYB46(1)                           <------MYB83                      --------->WOX13(1)                                  <---------TOE2(3)         <---------YAB1   --------->MYB59                                --------->MYB52(1) -------->ZAT6     <-----------------AGL1                         <-------TEIL ->AHL20(2)        -------->P                                 --------->MYB59 --AHL20(2) <---------WOX13(1)                       <---------ATHB12   ------>ZmHOX2a(1)   tagctctagttttgattaatctaccaattaggtcattcatttcagtttaagtcaaatcaacaattaggctcgtcctaacgttttcatttagccaaaacaa  7613600                                                                           --------->ANAC46                                                                           <---------ANAC55(2)                                                                           --------->ANAC58                                                                           <---------ANAC58                                                           --------->CCA1(2)                                               --------->AHL20(2)          --------->ANAC58                                               <---------AHL20(2)          <---------ANAC58                                           <---------AHL20(2)              --------->ANAC55(1)                                   --------->YAB1     ---------->DOF2      <---------ANAC55(1)                                  <---------YAB1   --------->AHL20(2)  <---------ANAC58                     --------->AHL20(2)    --------->AHL20(2)  --------->ANAC46                     <---------ATHB51  <---------AHL20(2) <---------ARR11(3)             ----------->GT1   ------>ZmHOX2a(1)  --------->AHL20(2)   <---------ANAC58     <---------ARR11(3)        --------->ICU4 --------->AHL20(2)  <---------ICU4            <--------     --------->ARR11(3)     ---------->ID1--------->AHL20(2)  <-------TEIL --------->ANAC55(2) ---------->DOF2     <---------AHL20(2)--------->AHL20(2) --------->ARR11(3)       <---------ANAC46   aaaaaaagatttcaacagtataaataattcgtccttatcaaaaaattaataaataaaaaagatatacatcattacttacgtaattgtttgtattttgata  7613700                                        <---------TOE2(3)                                     <---------AHL20(2)                                     --------->AHL20(2)                                --------->YAB1                   <---------ANAC46--------->YAB1                ------------>CBF              <-----                ----------->HVH21--------->AHL20(2) <---------------AGL15                     ------- <---------------------WRI1    --------->AHL20(2)   ================================================= -YAB1<---------ICU4       --------->AHL20(2)       --------------->AGL15       <------------CBF-----   gttttcgataatttctatgtgacggtttttaaaataaaaataaatgttgaataacaaaaaatagtagtacaatagaatactgaattggtttgtgtagggt  7613800        <---------ARR14(2)     --------->MYB46(3)    <-----------------AG    ------>MYB83    ------>MYB46(1)                                                         --------->ANAC55(2)   ----------->RAV1(1)                                                      <---------ANAC55(2) --------->MYB46(3)      <---------YAB1*TSS            <---------ANAC58    <---------LBD16 ------HVH21         ----------->GT1   ----------->GT1 <---------ANAC58   --------->CCA1(2) ---->GT1     ---------->DOF2 <---------AHL20(2)      <-------TEIL       --------->ARR11(1) =====================MADS_MADS----------->GT1      <---------GLK1(2)   --------->YAB1 ---->WRKY18(1)    ---------->DOF2<-----------GT1 <---------TOE2(2)    <---------ATHB12--------->ARR14(2)   caaaccaacaaatatggaaagaaaagtattatttagttacaacgtgaaaacacaggttcgtgctactactccaatgatacgggtctcaaaatactcaaaa  7613900                                  --------->YAB1                                  <---------ICU4                                 <---------YAB1                               <-----------GT1                              <---------AHL20(2)                       <---------ICU4                                                  <---------AHL20(2)                       --------->ATHB51                                               --------->ICU4                       -------->ATHB1                                             --------->TOE2(3)                       --------->ATHB12                       --------->AHL20(2) --------->ANAC46                      --------->ICU4                    --------->AHL20(2)     --------->MYB52(1)   -                      --------->AHL20(2)        --------->HSFB2a(2)         --------->ANAC46        -                 --------->LBD16 <---------ATHB12 <---------MYB52(1)     --------->ARR14(2)  <-------   <---------ANAC58   <---------AHL20(2)        <---------HSFB2a(2)      <---------ARR14(2)  <-------   <---------ANAC58   <---------ATHB51  <---------At4g35610   <---------AHL20(2) ----------->GT1-----   ctctggcatgtctcaattccacaaattattgtttaatcattctgcttcttctgtaagtttatatataaatgtgtatatactcaacgtaaatatttgctta  7614000                                               --------->At4g35610                                           --------->MYB52(1)                                        <---------At4g35610  <---------CCA1(2)                     --------->At4g35610                                        -- -------->TOE1(1)                    --------->ZAT14                                               <- -------->TOE2(1)                    <---------At4g35610     ---------->DOF2                    ----- --ANAC58                            <---------ZAT14  ---------->DOF2                 <---------ANAC58 --ANAC58 <-----------GT1   <---------AHL20(2) <---------ZAT14         >>>>>>>>>TBF1  <---------ANAC58 --->P  <-----------GT1     --------->AHL20(2) --------->ZAT14      >>>>>>>>>TBF1   --------->ARR11(3)   cctcgtatattttctctcttctcaggcttattaattctctgcagataactgcagaagaaagaagaaagaagaagaagaagagattagagcttgagccata  7614100                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                      <----------DOF2                                                                     <---------ANAC46                                                         <-----------RAV1(1)    <---------MYB52(1)                                                         <---------MYB46(3)    --------->LBD16                                                       <-------GAMYB <---------ANAC58              <---------ICU4                   --------->GLK1(2)     <---------ANAC58              <--------HAHB4                  <---------ARR14(2)    <------NtERF2<---------MYB52(1)             <---------YAB1                   --------->ARR14(2)  --------->ALFIN1        <---------ARR11(3)  <---------AHL20(2)                          <---------GLK1(2)  --------->ATERF1(1)      --------->ARR11(3) ------->AHL20(1)                    ---------->DOF2  --------->MYB52(2)      <---------ANAC46 --------AHL20(1)      ---------->DOF2        <---------GLK1(1)<---------AtMYB61<-------GAMYB ---->AHL20(2)--------->ATHB12----------->RAV1(1)     <---------MYB46(3)     <---------LBD16 <-------   atatataatcccttgatcattagtctaaagaaccacataaaaagatgggattctggtcgttgttggaggtggcttctatgccggttattcaagttctttt  7614200                                        <-----------ARR10                                        <---------ARR11(3)                                        --------->ARR11(3) --------->LBD16                               <---------MYB46(3)         <---------ANAC55(2)                     <--                           ----------->HVH21              --------->ANAC58                    ------>ZmHOX2a(2)                  <---------AtLEC2    --------->ANAC58    --------->ANAC46                   <-------               <----------DOF2 ------>ZmHOX2a(2)          --------->ANAC55(2)               ---------             --------->At4g35610      --------->ANAC58    --------->ANAC58                  <--------             <---------At4g35610<-------GAMYB             ----------->GT1                  --------->YAB1 ---DOF2   <---------PCF2<---------At4g35610       <---------REM1(1)--------->AtLEC2      <---------ATHB12   catgagtcttgtgggagctttcatggcctctgatcgttgcaagctcttccctgttgaagcccgtaattccatgaacaaggtaaaccaattcaatgatcct  7614300  Previous    Next  AGI:  At2g17500.1    Description:  auxin efflux carrier family protein. similar to auxin efflux carrier family protein [Arabidopsis thaliana] (TAIR:AT5G65980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71703.1); contains InterPro domain Auxin efflux carrier; (InterPro:IPR004776) Range:  from: 7613839    to: 7616343    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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