Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ===========================================bZIP_DOF         --------->TGA1a         =============================MYC_MYB  --------->RAP2.6(2)         --------->ANAC46                <----------DOF2                          ----------->GT1 ---->ZmHOX2a(1)                     --------->REM1(1)                        <---------DAG2 ------ANAC46 <---------ANAC46    <---------ANAC58                          ------>NtERF2 ----ZAT14    <---------ANAC58    <---------ANAC58                      --------->ANAC58 --->ZAT18    <---------ANAC58 <---------MYB52(1) --------->AtMYB61     --------->ANAC46 -ANAC58 <---------O2         <-------GAMYB   --------->MYB46(3)        --------->ANAC58 -ANAC58 --------->O2        <-----------RAV1(1)------>NtERF2         ---------->DOF2             <--   cctgtatgcccaagtcgcttgtgccataactctgttgcttcatctttagccaccattgctgtttcttcgtttgaaagccaccttaggtgaaaactcttgt  7608800                                                                                        --------->ATHB12                                                                           --------->ARR14(2)                                              --------->ZAT14              <---------ARR14(2)                                              <---------ZAT18             <---------GLK1(1)     <----                                              --------->ZAT18             --------->GLK1(1)   <------                                       --------->ATHB12              <---------ANAC46  <---------YAB1                                    --------->YAB1                   <---------ANAC58 <---------ARR11(3)                          <---------ANAC58    <---------ZAT14  <---------TOE2(3)      --------->ARR11(3)                          <---------ANAC58<-----------RAV1(1)<---------AHL20(2)     <---------YAB1                       <----------DOF2<---------YAB1        <---------AHL20(2)  <---------MYB52(1) ---------GT1       <-----------GT1<---------YAB1  <---------MYB46(3)<---------ANAC58--------->YAB1--   tcaccatctctacttctccaattttctttcttgcactatcatgaatggtgcagtagttgttttttaatgtgacttgatatccgttgatgatcatttgagg  7608900                                                         <-----------GT1                                                        <---------CCA1(2)        --------->ARR14(2)                                                     <----------DOF2             <---------ARR11(3) --------->ANAC58                          <---------ANAC55(2)             --------->TOE2(3) --------->ANAC58           <-------TEIL   --------->ANAC58          --------->YAB1    <---------DAG2 --------->ANAC46       --------->MYB59    --------->ANAC55(2)     <-----------HVH21   <----------DOF2 --ZmHOX2a(1)           <---------TOE2(3)  --------->ANAC55(1)  <---------ANAC58 --------->ARR11(3) ---TOE2(3)       <---------TOE1(2)        --------->ANAC58     <---------ANAC58 <-----------ARR10 ------->ZAT6    --------------->AGL15     <---------ANAC46 <----------DOF2--------->TOE1(3)       --   aacactcaacaaatttttcccaagtttaggtacaaggagaacatcacgtatgcctcttttatctttccttgtcataacctcaatatctccttttccttca  7609000         --------->At4g35610         <---------At4g35610      ---------->DOF2    <---------YAB1  <--------HAHB4  --------->YAB1                                                                  --------->ANAC55(2)  --------->ATHB12                                                            <-----------HVH21  <---------ICU4                   <----------DOF2                         <------MYB83 <---------YAB1          <---------YAB1                                    <------MYB46(1) <---------ATHB12      --------------->AGL15    <---------MYB52(1)         <---------ANAC58 --------->ICU4        <---------------AGL15   <-------GAMYB               <---------ANAC58     ----- ------->YAB1         <-----------------AGL3  <-----------RAV1(1)<---------GLK1(2)<---------ANAC55(2)   ctcatcattacagctccatttccaactcttattggaactttgaagtctctgttgatttttgtgaacagcttctcatttggtgtcatgtgatttgtgcatc  7609100                  --------->ARR14(2)           ------->GAMYB         -------->P        --------->WOX13(1)                                          <-----------GT1      <------ZmHOX2a(2)           <----------DOF2               --------->ARR11(3)          ---------      =======================HOX2a_HOX2a                  --------->ANAC46         --------->At4g35610    --------->WOX13(1)  <---------ALFIN1               --------->YAB1           <---------At4g35610   <---------ETT(2)   ------>ZmHOX2a(1)        <---------ANAC58 <---------ARR11(3) <---------At4g35610 ---->MYB46(3)    <---------ARR14(2)           <---------ANAC58 <---------GLK1(2) <-----------RAV1(1)   cactgtcgatcaaccaagtgtttcctccacttggttctttaatctcttgtcttgcaataaacacaagatttttcttcacttcttctgctgtctctgtagc  7609200                                                                             ------>ZmHOX2a(2)                                                                           <---------ARR14(3)                                                            <---------ANAC46<------ZmHOX2a(2)                                                          --------->LBD16  --------->ARR11(3)                                                         --------->DEAR3(1)--------->ARR14(2)                                                        --------->DEAR3(2) <---------ARR11(3)      --                                                        <---------LBD16   --------->GLK1(1)        <-                                    <---------ANAC58    <---------At4g35610--------->AGP1<---------ANAC58                                    <---------ANAC58    --------->At4g35610<---------ARR14(2) <------MYB83                                 <----------DOF2        --------->ATERF1(1)--------->ARR14(3) <------MYB46(1)                        <----------DOF2               <---------WRKY12  --------->LBD16  <---------ANAC46   *TSS                <---------DAG2                 <---------WRKY38(1)----------->ARR10 <---------MYB52(1) >ZAT14      <----------DOF2 <----------DOF2        <-----------HVH21  --------->LBD16   <---------ANAC58   cattcccagtttgctcttttgtgagccttttctttctttcttggtgtccctcttggtcaccggcgttttcatcccgagatcttgagccatttcgtttggt  7609300              <---------AGP1            ----------->ARR10                         ----------->GT1        --------->At4g35610                           <---------ANAC46                    <-------TEIL ------->HSFB2a(2)                      <----------DOF2       <---------AHL20(2)       --------->CCA1(2) --------HSFB2a(2)            <---------YAB1   --------->YAB1--------->AHL20(2)        --------->At4g35610   tccagtaatcagcgtagctctgataccatgttgtgattctcactttcactcatgttttgtgaattaaaacgatttagaagttgagagagagatgcataaa  7609400                            <----------DOF2                                                       ---                       <---------ICU4                                                             ---                      <---------ATHB12              ---------->DOF2                               ---              --------->HSFC1(2)                  ------>ZmHOX2a(1)                             -----              <---------HSFB2a(1)                 <---------YAB1 --------->DAG2           -----------              --------->HSFB2a(1)                --------->TOE2(3)----------->GT1       --------->At4g35610              <---------HSFC1(2)            <-------TEIL        ---------->DOF2       <---------GLK1(2)   ctctgtttttcttagaattttcccataattctttcttacacacacatacatccttatagcaaaacataaagtaaaacacaaaatactagcttctgacacc  7609500                                               --------->ANAC46                                               --------->ANAC58                                        --------->ZAT6                                     --------->PCF2                                   <---------ZAT2            ------>MYB46(1)        --------->At4g35610                                      ---------    ----------->HVH21              <---------At4g35610                                      --------- --->MYB46(1)                      --------->ZAT2--------->YAB1                             --------- ----->P    ------>MYB83          <---------ATERF1(1)<---------ANAC58                     ---------->DOF2 --->MYB83  -------->P  <-----------RAV1(1)    --------->ANAC58                   --------->ANAC46 ---->AtMYB61       <---------ZAT14--------->ATERF1(1)   --------->ZAT6           --------->ANAC58 >HVH21   --------->AtMYB61     --------->ATERF1(1)  <---------ANAC58             --------->ANAC58   tacacgatgacacctacacgattacactgttgcaggctgctcccactacaagcatgcttactctagattatagcttagttttccaagtaaacaaaagcaa  7609600                                                                                                    <   <-------TEIL <----------DOF2                                                                 <---- >ANAC46   ------>MYB83--------->ANAC55(1)                         --------->ANAC58           ------- >ANAC58   ------>MYB46(1)<-----------GT1                          --------->ANAC58      ------->GAMYB >ANAC58--------->MYB46(3)------->TEIL    <----------DOF2        ---------->DOF2--------->ICU4<------   ctagattcaaaccaacttctttcacatgtaactacttgttctctctttgacttcttcagtatggtttgaaagcaaaataggcattattcaacagtctgct  7609700  Previous    Next  AGI:  At2g17490.1    Description:  transposable element gene. copia-like retrotransposon family, has a 9.3e-199 P-value blast match to gb|AAO73521.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family) Range:  from: 7606067    to: 7609203    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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