Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->At4g35610                                                                                <---------At4g35610                                                                          <---------ZAT2                                                                          <---------At4g35610                                                                    =========================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)                                                                  --------->ARR11(3)    --------->AtMYB61                                  --------->ANAC58   --------->ZAT2            <   --------->ZAT18    --------->YAB1                   --------->ANAC58   --------->At4g35610 ------- -GT1    <-----------HVH21          --------->ANAC46<----------ID1<---------ARR11(3)  <------ZmHOX2a(1)   ccaagaccactggtcactcttctaacatcatatactacaaacaagaagatgaagaagacgaaatgtctgatcttgaagctggagcagaggatgctattga  7577800               --------->GLK1(1)               --------->At4g35610          <-----------RAV1(2)        ----------->RAV1(1)                           <-------GAMYB       --------->MYB46(3)                <----------DOF2 --------->ARR14(2)                 <---------ZAT2   <-----------RAV1(1) ------ZmHOX2a(1) <-------TEIL      <---------At4g35610    <-----------GT1 ---->HVH21  <------ZmHOX2a(1)      --------->At4g35610 <---------MYB46(3)               --------->ZAT14   caggattcaacaacaggagatgcaattccacaactcttagctgctttagtttcttctgttgttacttcatagttcaaatgaaacgatgctgtttactaac  7577900                                                                             ---------->ID1                                                                         <---------ANAC58                                                                <---------ARR11(3)                                                               --------->GLK1(1)                                                               <---------GLK1(1)                              --------->TOE2(3)               <---------ARR11(3)                 <---------SPL7                    --------->ANAC46      <---------ANAC58                <---------ANAC58                   --------->ANAC58    <-----------GT1        -------                <---------ANAC58                   --------->ANAC58    --------->ARR11(3)     -------                <---------ANAC46        <-----------GT1       --------->ARR11(3)------>ZmHOX2a(1)     <------ZmHOX2a(1)        <----------DOF2    ---------->DOF2--------->ARR11(3)   --------->AHL20(2)   ttagtcaggaaactattgtcgtacaagtgtttctttaatgtgttactacgtttaagccaatatagatatctaataacttgtcctaaactaaataactcgc  7578000                                                                                                  ---                                                                                                 <---                                                                                                 <---                    <---------AHL20(2)                                                           <---                  <---------YAB1                                                                 <---               --------->ICU4                                 --------->ARR11(3)                 ----       --------->ATHB12                                       <---------ARR11(3)                -----       <---------ICU4<---------YAB1                         --------->ICU4                  ---------      <---------YAB1--------->AHL20(2)                 --------->ANAC46               --------->AHL20(2)     --------->ARR11(3)                 ----------->GT1--------->ANAC58              <---------YAB1     <---------ARR11(3)          <-----------GT1       --------->ANAC58           ------>ZmHOX2a(1) -->ANAC58     <---------YAB1 <---------AHL20(2)     --------->ZAT6               =================== -->ANAC58  <---------YAB1   --------->AHL20(2)   ------>ZmHOX2a(1)       <<<<<<<<<TBF1<---------AHL20(2)   actacatgatcattgttattattaatatagatttatttcgatttgaaaaatcctaacacgacatgatcatgttttcttcttctccttattatatgtgatc  7578100                         ------------>CBF                        --------->TOE2(3)              --------->YAB1        <---------ANAC55(2)        --------->ANAC55(2) ------>LBD16 --------->ATHB12 ------ANAC55(2)       --------->ANAC46 ------ANAC58 <---------ICU4                             --------->At4g35610 ------ANAC55(1)       <---------ANAC55(2)               <---------At4g35610 ------ANAC58<---------ATHB12    ----------->HVH21      <---------TOE2(3) ----->ANAC55(2)       --------->ANAC55(2)         --------->YAB1                    <---------ZAT6 ->ZmHOX2a(2)<---------YAB1     <---------WOX13(1) <--------HAHB4        --------->ANAC58 -->HVH21    --------->ICU4    <---------ANAC58   <---------YAB1         --------->ANAC58 ==HOX2a_HOX2a-------->ATHB1   <---------ANAC58 --------->YAB1         <------ZmHOX2a(1)     --------   cgtatcaaatacttaatcattgtttacgtcaatgcttgacattaacaaaattatcattaagctaaacagataaggacgcgagagatagagatagatagtg  7578200                 <---------AHL20(2)                --------->AHL20(2)                          >>>>>>>>>TBF1             <---------AHL20(2)                       >>>>>>>>>TBF1             --------->ATHB51                 ------------------------>ANAC81    <---------YAB1                          <------ZmHOX2a(1)             <---------ANAC46   --------->AHL20(1)                 --------->CCA1(2)  >>>>>>>>>TBF1 ----------->TGA1   <---------AHL20(1) *TSS           <----------ID1>>>>>>>>>TBF1       ----------->HVH21          --- --->GT1     --------->AHL20(2)  ---------->DOF2>>>>>>>>>TBF1  ---------->DOF2        --------->YAB1   actaatatttttgaattatttaatgcagtttgagagaaagagacgaggaagaagaagaagaagaagaaaggaagtgacgaagaaagaatgagaagacgaa  7578300                     <---------------AGL15                     --------------->AGL15                    ----------------->AGL1                    <-----------------AGL3                    <-----------------AGL1           <<<<<<<<<TBF1              ------>ZmHOX2a(2)                   <<<<<<<<<TBF1             --------->ARR14(1)         <---------ARR14(3)             <------ZmHOX2a(2)          --------->ARR14(3)            --------->ARR11(3)          <---------ARR14(2)            --------->ARR14(2)          --------->ARR14(2)            <---------ARR11(3)          <---------ARR11(3)            --------->AGP1              --------->ARR11(3)                             --------->At5g28300            <---------ARR14(2)          <-----------ARR10                             ----------->GT1          ----------->ARR10 ----------->GT1    <<<<<<<<<TBF1            <---------CCA1(2) ------->DOF2--------->CCA1(2)         --------->RVE1(1)         <----------DOF2<----------DOF2<-----   gaaagagaaaacaagatccgattcaaaatatggaaacttgaatatcttcttcttcttcttccttctcctttctcatctctcactttgagggtgaattttg  7578400                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        <---------AGP1                                         --------->YAB1 <---------ARR11(3)                                         <---------ICU4 --------->ARR11(3)                             <---------MYB46(3) <---------ARR14(2)                           <-------GAMYB<---------ATHB12<---------ARR14(2)                     <------ZmHOX2a(1)  --------->ICU4  --------->ARR14(2)                    -------             <---------ARR14(2)<---------HSFB2a(2)     <---------CCA1(2)                    ---------   <---------HSFB2a(2)    <---------MYB46(3)    --------->ARR14(2)                    <---------REM1(1)   --------->HSFB2a(2)   <---------AtMYB61 <---------YAB1--------->GLK1(1)     <------ZmHOX2a(2) ----YAB1    --------->ARR14(2)--------->HSFB2a(2) <-----------GT1           --------->GLK1(1)-------   attttgtagaaaatggattcgaaggagatggttgtggaagaaatcatgagaattcacagatctctaccattgagaccagagatcgacgatgtagaaacgg  7578500                                              --------->ANAC46                                   <---------GLK1(2)                                ------>ZmHOX2a(2)                                       <----------DOF2                               <------ZmHOX2a(2)                                    --------->ARR14(2)                              --------->ARR14(2)                                 <---------TOE2(3)                              <---------ARR11(3)                                 <---------TOE1(2)    XXXXXXXXXXXXXXXXXXXXXXX>MIR829.1          --------->ANAC58               ----------->RAV1(2) -->ANAC58                    --------->ARR11(3)             ----------->GT1 ------>ZmHOX2a(1) >MYB52(1)                    <---------ARR14(2)     --------->YAB1          <---------At4g35610<---- -->ANAC58            ---------->DOF2         --------->ANAC58     <-----------GT1  <---------ARR14(2)   caacttctctgatacaaaacgttgaaaaggaagatcggaatcgtttagaagccattgataaacttgttaaaacctcttcctctgaggttcctttagagct  7578600                                                                                <---------AGP1                                                                             <---------HSFB2a(2)                                                                            <-----------------AGL1                                                                         --------->KAN4(2)                                                                        <---------HSFC1(2)       ----                                                                        --------->HSFC1(2)       <---                                                                        --------->HSFB2a(1)     -----                                                                        <---------HSFB2a(1)  <-------                                                   --------->ZAT14  --------->ANAC58   --------->GLK1(2)                                            --------->ZAT14         --------->ANAC58  <---------GLK1(2)                                            <---------ZAT14      --------->TOE1(2) <---------HSFB2a(2)                                         --------->LBD16        --------->HSFC1(2) --------->HSFB2a(2)                                        --------->HSFB2a(2)     <---------HSFC1(2)------>ZmHOX2a(2)                       ---------->DOF2  <---------HSFB2a(2)    --------->ANAC58 --------->ARR14(2) ------DOF2    --------->At4g35610--------->MYB52(2)           --------->ANAC58 <---------ARR14(2)   tttcaatgtgttcaaggagatgaagaaaagtcttgttcgtttccagagcacagaacagacaagagaagctacgaaaattctcgatctggaatctgtacac  7578700  Previous    Next  AGI:  At2g17430.1    Description:  ATMLO7/MLO7 (MILDEW RESISTANCE LOCUS O 7); calmodulin binding. Identical to MLO-like protein 7 (MLO7) [Arabidopsis Thaliana] (GB:O22752;GB:Q94KB6); similar to MLO10 (MILDEW RESISTANCE LOCUS O 10), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G65970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71699.1); contains InterPro domain Mlo-related protein; (InterPro:IPR004326) Range:  from: 7575100    to: 7577922    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g17440.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT4G35470.1); similar to PSR9 [Brassica nigra] (GB:AAM10777.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype (InterPro:IPR003591) Range:  from: 7578222    to: 7580881    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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