Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->At4g35610       <---------At4g35610    ----------->GT1      ------->TEIL           <---------ZAT6 --------YAB1           --------->TOE2(3)    <----------ID1                                       <-- -->At4g35610          <---------YAB1----------->GT1         --------->REM1(1)                 <----- ---At4g35610 --------------->AtSPL8--------->YAB1     --------->MYB59                 <---------AtMYB61   caagattgcatctcaatttgtacttatcttagtggtaattagaaaaaaaaacaaaattaggctacaatagttttgtttgtttgtttgtttaggtgttagg  7571000                                                                          <---------AHL20(2)                                                                      <---------AHL20(2)  -----------                                   --------------->AGL15          ----------->GT1         <------MYB83                                   <---------------AGL15         <---------TOE2(3)        <------MYB46(1)  ----------->GT1           <---------ZAT6                    <---------AHL20(2)         <---------TOE2(3) -------ARR14(2)        <---------YAB1                       --------->AHL20(2)          --------->MYB59 ----TOE1(3)    --------->LBD16 <-----------GT1 <---------TOE2(3)<---------TOE1(3)    <---------GLK1(2)   gatagggtttattttttccgaagtttattagtgtttactatttagagtttaatgtttccaaaattttatggtttaatttatactctcagattaggttaaa  7571100                                                          --------->ATHB12                                                          -------->HAHB4                                                          --------->ATHB51                           <-----------GT1                <--------ATHB1                       --------->AHL20(1)                 <---------ICU4                       ------              --------->ARR11(3)          <---------AHL20(2)                                   ------              <---------ARR11(3)       <----------DOF2   <---------ATHB51         --------->TOE2(3)              --------->GLK1(2)        --------------->AGL15                    --------->ARR11(3)   <---------AHL20(2)  <---------AHL20(1)--------->AHL20(2)           --------->TOE2(3)      <-------  <---------YAB1     <---------AHL20(1)--------->TOE2(3) <---------AHL20(2)     <---------ARR11(3) --------->AHL20(2)  <---------AHL20(2)<---------------AGL15<---------WOX13(1) <---------CCA1(2) >GT1<---------YAB1 --------->YAB1  <-----------GT1      --------->AHL20(2)   <---------AHL20(2) ----   catttttatttttaaaaatctataatatttttctaattttactttaaattgtagactaaataattgattcagccttatattatatcttaaactttgcaag  7571200        <---------ANAC58        <---------ANAC58        <---------ANAC46   <----------DOF2                                                                   <----------DOF2 --->ANAC58                         --------->YAB1                         <---------ICU4 --->ANAC58             <<<<<<<<<<GATA-1                                <---------AHL20(2)    ------- --AtLEC2              --------->GLK1(1)                               --------->AHL20(2) <----------ID1 ----->YAB1            <---------GLK1(1)   ---------->DOF2       <-----------GT1   <---------ATHB12   aatcactttggcttgtaatgaaatgaaatccactgttttcatattcaaagtgattctagtcttgtattaactattaaatattccaatctttaacaacaaa  7571300                              <---------ICU4                              -------->HAHB4               --------->AHL20(2)                              --------->YAB1               <---------AHL20(2)                             <---------ATHB51        ------------>CBF                             <---------YAB1    --------->AHL20(2)                             --------->ICU4    --------->ATHB51                --------->DAG2               --------->ANAC46                <---------AHL20(2)      ---------->DOF2               --------->ANAC58                <---------ICU4        <---------YAB1               --------->ANAC58                <--------ATHB1     --------->AHL20(1)       <---------AHL20(2)  --------->YAB1     --------->ICU4      <---------AHL20(1)              ---      --------->YAB1      <---------AHL20(2)  <---------ATHB51 <---------AHL20(2)             -------     <---------YAB1    ------->TEIL       ------------>CBF--------->AHL20(2)  ---------->DOF2-------- --->DOF2    ---------->DOF2<---------AHL20(2)<---------ATHB12 --------->AHL20(2)      <-------TEIL   gaaaactataatattcaaagccatgtatataataatggacatggtccaataatttggcaatttaaaaaaatattaaagagaaaagtagattcaaataaag  7571400                                                                                                   --                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                            <--------                                    <---------ATHB12                                    <---------ANAC58                             --------->ARR11(3)           ---------->DOF2               <---------ANAC58                             <---------AGP1            --------->YAB1            <------ZmHOX2a(1)<--                           *TSS------>ZmHOX2a(2)      <---------YAB1          <-----------RAV1(2)<---                       <-----------RAV1(1)          --------->YAB1           <---------ZAT2 <-------- ------>ZAT18          --------->ALFIN1     --------->WRKY18(1)              --------->At4g35610<---- -->DAG2      ----------->GT1<---------ARR11(3)    <-------TEIL              --------->ZAT2 <-------- -->DOF2    <------------CBF<---------CCA1(2)  --------->ICU4   <----------DOF2  ====================   tggtctatatttcaaattgcaaaatgtgttggatctcaatgagccagtcaagattcattataaagtctttatttagcacagcaggaggtttcttacttgg  7571500                                                                           ----------->HVH21                                                                           --------->ETT(2)                                                                         <---------ATERF1(1)                                                                        --------->RAP2.3(3)                                                                        --------->DEAR3(1)                                                                       --------->RAP2.3(1)                                                                       --------->RRTF1(1)                                                                       <------NtERF2                                                                       --------->ATERF1(1)                                                                       --------->DEAR4(2)                                                                       --------->ERF1                                                                      --------->ABI4(1)                                                                      ------>NtERF2                                                                      <---------ATERF1(1)                                                                     --------->DREB2C(2)                                                                     --------->RRTF1(2)                                                                     --------->RAP2.3(3)                                                                     --------->RRTF1(3)                                                                     --------->ATERF1(2)                                                                     --------->DEAR3(1)                                                                     --------->RAP2.3(2)                                                                     <---------DEAR3(1)                                                                     --------->RAP2.6(2)                                                                    --------->RRTF1(1)                                                                    --------->RAP2.6(1)                                                                    --------->ATERF1(1)                                                                    <------NtERF2                                                                    --------->ORA47(2)                                                                    --------->DEAR4(2)                                                                    --------->RAP2.3(1)                                                                    --------->ERF1                                                                   ------>NtERF2                                                                   --------->ABI4(1)                                                                   --------->At4g35610                                                                   <---------At4g35610                                                                   <---------ATERF1(1)                                                                  --------->RRTF1(3)                                                                  --------->RRTF1(2)                                                                  --------->RAP2.6(2)                                                                  --------->RAP2.3(2)                                                                  --------->RAP2.3(3)                                                                  --------->ATERF1(2)                                                                  <---------DEAR3(1)                                                                  <---------ALFIN1                                                                  --------->ANAC46                                                                  --------->DEAR3(1)                                                                 --------->ERF1                                                                 <------NtERF2                                                                 --------->RAP2.3(1)                                                                 --------->ORA47(2)                                                                 --------->RRTF1(1)                                                                 --------->ATERF1(1)                                                                 --------->RAP2.6(1)                                                                 --------->DEAR4(2)                                                                <---------DEAR4(2)                                                                <---------DREB2C(1)                                                                --------->ABI4(1)                                                                <---------ATERF1(1)                                                                <---------RAP2.3(1)                                                                --------->At4g35610                                                                <---------At4g35610                                                                ------>NtERF2                                                               --------->RAP2.3(3)                                                               --------->ANAC46                                                               --------->RRTF1(2)                                                               <---------DEAR3(1)                                                               --------->RRTF1(3)                                                               --------->RAP2.3(2)                                                               <---------ATERF1(2)                                                               --------->RAP2.6(2)                                                               --------->ATERF1(2)                                                               <---------ALFIN1                                                               --------->DEAR3(1)                                                              --------->ERF1                                                              --------->RAP2.3(1)                                                              --------->DEAR4(2)                                                              --------->ORA47(2)                                                              --------->RRTF1(1)                                                              --------->RAP2.6(1)                                                              --------->ATERF1(1)                                                             <---------ATERF1(1)                            ------>NtERF2                    <---------At4g35610                           <---------ALFIN1                  --------->At4g35610                           --------->DEAR3(1)                --------->LBD16 --------->At4g35610      --------->MYB46(3)                 ------>NtERF2<------NtERF2 ---->ZmHOX2a(2)          <---------MYB55(2)                 --------->ABI4(1) -------At4g35610 ------>NtERF2                             <---------ALFIN1 ------AGP1      --------->RAP2.3(3)                        --------->ANAC46<---------DDF1 ----->ARR11(3)  --------->RAP2.3(2)                        --------->DEAR3(1) ----->ARR14(2) --------->ORA47(2)                        ------>ZmHOX2a(1)<---------ETT(2) -ANAC46        --------->RAP2.3(1)     <<<<<<<<<TBF1     <---------ATERF1(1)   --------->AtLEC2 -------GLK1(1)------>NtERF2<---------At5g28300        ------>ZmHOX2a(1)--------->RAP2.3(2) ------ARR14(2)--------->LBD16   <----------DOF2  --------->TOE2(1)<---------DREB2C(1) -ANAC58   --------->ARR14(2)  --------->LBD16    --------->TOE1(1)<---------RAP2.3(1) -----CCA1(2) --------->ANAC46--------->DEAR3(1) ------>ZmHOX2a(1)<---------ATERF1(2) -ANAC58   <---------ARR14(2)<------NtERF2 <<<<<<<<<TBF1 <---------ALFIN1------>NtERF2            <-- =====HOX2a_HOX2a--------->DEAR3(1)    xxxxxxxxxxxxxxxx>smallRNA(i)<---------DEAR4(2)     --------->ANAC46   atctgctctctcaaatccgccgtctctagccaccgcgttttcttcttcttcctcgtcctcctccgccgccgccgccgtcgacatggaaactcacaaaacc  7571600                                       <------NtERF2                                       --------->ATERF1(1)                                      <---------ORA47(2)                                      <---------RAP2.3(1)                                      ------>NtERF2                                      <---------DEAR4(2)                                      <---------ERF1                                     <---------ANAC46                                     --------->DEAR3(1)                                     <---------RAP2.3(2)                                     <---------RAP2.3(3)                                     <---------RRTF1(3)                                     <---------DEAR3(1)                                    <---------ABI4(1)                                   <---------ATERF1(1)                                  --------->TGA1a                                  --------->O2                                  --------->ANAC58                                <---------ALFIN1                                --------->ANAC46                             <---------ZAT18                             --------->ZAT14                            <---------ALFIN1                           <---------At4g35610                           --------->At4g35610                          ----------->RAV1(1)                        --------->ZAT2<---------ATERF1(1)                  <---------ZAT18 <---------TGA1a                  --------->ZAT18 --------->ANAC46       --------->At4g35610                    <----        xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               <---------At4g35610                    -----     <---------AtLEC2   --------->At4g35610<------ZmHOX2a(2)  --------->At4g35610       <---------MYB46(3) -------TOE2(3)  --------->ALFIN1 --------->ANAC58------->TEIL<---------At4g35610    <------ZmHOX2a(1)   aaggtttgcatcgtcggaagtggaccagcagcacacacggcggcgatctatgcatcgagagcggagcttaagcctcttctcttcgaaggatggatggcta  7571700                                     <---------TGA1a                                  ------->GAMYB                                  ----------->HVH21                                  --------->DEAR3(1)                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                               ================MYC_MYB                      <-----------GT1--------->O2                     --------->AHL20(2)                  --------->WOX13(1) --------->TGA1a                 <---------WRKY12<---------MYB55(2)                --------->WRKY18(1)  <---------O2               <--------ZAP1  <---------MYB111(2)               <-----------HVH21 --------->DEAR3(2)              <---------DEAR3(2) --------->MYB46(3)             <---------DEAR3(1)------->GAMYB                      --------->ARR11(3)            <------NtERF2     <---------MYB55(2)             ----------->HVH21           ------>NtERF2      --------->MYB46(3)           <---------ANAC46           --------->LBD16    <---------MYB52(2)    --------->LBD16         <---------LBD16   --------->REM1(1)       <---------LBD16<---------ARR11(3) -----DOF5.7(2)--------->At5g28300=============MYC_MYB     <---------LBD16 ---->MYB52(1)<---------MYB46(3)--------->MYB52(1)----------->RAV1(2)   acgacatcgctcccggcggtcaattaactacaacaaccgacgtcgaaaacttccctgggttccctgaaggtattctcggtattgatatcgttgagaaatt  7571800                                      <---------ARR14(2)                                   --------->ANAC58                                   --------->ANAC58                                   --------->ANAC55(1)                                   --------->ANAC46                                <---------REM1(2)                             <------ZmHOX2a(2)                            --------->ARR14(2)                            <---------ARR14(2)                            <---------ARR11(3)                                               <-------                --------->CCA1(2) <---------LBD16                                            <-------             ----------->ARR10------>ZmHOX2a(2)          <---------GLK1(1)                   --------      --------->MYB52(1)    --------->ARR11(3)   ---------->DOF2                    <-----------GT1   cagaaaacaatcggagagatttggaactacgatcttcacggaaactgttaacaaagttgatttctcatcgaaaccgtttaagctattcactgattcgaga  7571900  Previous    Next  AGI:  At2g17420.1    Description:  NTRA (NADPH-dependent thioredoxin reductase 2). Identical to Thioredoxin reductase 2 (NTR2) [Arabidopsis Thaliana] (GB:Q39242;GB:O22751); similar to NTR1 (NADPH-dependent thioredoxin reductase 1) [Arabidopsis thaliana] (TAIR:AT4G35460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68513.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II, active site; (InterPro:IPR008255); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); con Range:  from: 7571427    to: 7573621    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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