Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     ------>MYB83                                                  <---                                   ------>MYB46(1)                                --------->AHL20(2)                        <---------AHL20(2)                                        <---------AHL20(2)                        --------->AHL20(2)                <---------ICU4          --------->AHL20(1)                       --------->AHL20(2)   ---------->DOF2                       <---------AHL20(1) ----->AHL20(2)        <---------AHL20(2)--------->AHL20(2)                      <---------AHL20(2) ------AHL20(2)    <---------YAB1 ----------->RAV1(1)    --------->ICU4          --------->AHL20(2) - >GT1         ----------->GT1   --------->MYB46(3)  ----------->GT1       <----------DOF2  --------->ZAT14   taaaaatatgtatacaatgttataatttaatcaaaccaacaaaataaaaagagtttgtaaaaatttcaaaatagttctttcaaataaattctgaacagtc  7565700        <---------YAB1      <---------AHL20(2)      --------->AHL20(2)     --------->AHL20(2)     <---------AHL20(1)     <---------AHL20(2)  <-----------HVH21               <---------AHL20(2)              ----------->GT1     --------->AHL20(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ----------->GT1         --------->ZAT6 <---------AHL20(2) <---------ANAC46                    --------->AHL20(2)<---------ANAC58       ---- -------DOF2   <---------ZAT6   <-----------HVH21       <---------AHL20(2)<---------ANAC58--------->At5g28300 -------->AHL20(2)<---------ZAT14                 --------->TOE2(3)     <---------YAB1<-----------GT1   ttttaaatttatttttagtgtttagtgtgtcatatgtcatatgtatacaaaaacttaatttaaaatttgttattttgagtgagagttttaactgtaaaac  7565800                                                                              ------>ZmHOX2a(1)                                                                       <---------AHL20(1)                                         --------->ATHB12              --------->AHL20(1)                              <---------AHL20(1)                      --------->AHL20(2)                              --------->AHL20(1)                      --------->YAB1                              <---------AHL20(2)                      <---------AHL20(2)                              --------->AHL20(2)                     <---------YAB1                             --------->AHL20(2)                    <---------ICU4                         <---------AHL20(2)                        --------->YAB1                         --------->AHL20(2)   ----------->GT1     <---------YAB1                 --------->DAG2          --------->ATHB51         --------->ICU4           <-----------GT1   <---------AHL20(2)              <---------At4g35610    --------->AHL20(2)   <-----------GT1----------->GT1     <---------ICU4      ---------->DOF2    <---------MYB59 ----->AHL20(2) ---------->DOF2       --------->YAB1  <---------TOE2(3)<---------AHL20(2)   taaatatacgattttacaaaaagtaatataaataaattaagcattatttggaaaataatgtaaagctgataattatattcctaattttaaatccatattg  7565900                                                 <---------ARR11(3)                                                <---------CCA1(2)                                               --------->AHL20(1)                             ---------->DOF2   <---------ARR11(3)                    <---------YAB1---------->DOF2--------->ARR11(3)    ---------->DOF2 <---------AHL20(2)         --------->ARR11(3)        <---------ANAC58        ----  ------>ZmHOX2a(1)--------->AHL20(1)          <---------AHL20(1)        <---------ANAC46   --------- --------->TOE2(3) <---------AHL20(1)    ----------->GT1             --------->At4g35610<-----------HVH21 --------->TOE1(3) --------->AHL20(2) ---------->DOF2  <---------ETT(1)  <---------ANAC58   ---------   tttccttaaagaatatttcaatataattgcaaaaagaaaagaaaggaaatatatcttccgacaatattatctgatgcgcgtgaaatagactatcaggcca  7566000   ----------->GT1   <------MYB83               --------->TOE2(2)   <------MYB46(1)  --------->At4g35610  --------->MYB59<---------MYB52(1)       --------->LBD16                                         <-- ----->ICU4     <-----------HVH21       <---------LBD16        >>>>>>>>>>GATA-1                   --- >ANAC58  --------->DAG2      --------->TOE1(2)           --------->TOE1(2)     *TSS        --------- >ANAC58 ---------->DOF2     ----------->RAV1(2) <------------CBF         ------------>CBF <---------MYB46(3)   agattaggtcaaaaagcccgtgagcccaaaaacctgagaaaacccggttcaaattgcaaaccctcgatttcatttctccaattcgatagacgctgggtaa  7566100                                                     <---------GLK1(1)                                                     --------->GLK1(1)                                                     --------->ZAT2                                                     <---------ZAT2                                                     <---------At4g35610                                                     --------->At4g35610                                                 --------->ANAC58                                                 --------->ANAC58                                                 --------->ANAC46                           <--------                                                <---------LBD16                             ---------           <----------ID1                      --------->MYB52(1)                          <---------CCA1(2)          --------->SPL7                       <---------ALFIN1                      --------->ATERF1(1) -------AHL20(2)                            --------->PCF2                          <---------ATERF1(1) ------>AHL20(2)---------->DOF2         <---------At5g28300                       <------NtERF2 -->GT1  <------ZmHOX2a(1)           <-----------HVH21   <---------LBD16       ---------->ID1   aaaaattcggaggacgacgaaagagaaaacgagtgtttcagtcactgccccacggagctctcggaaatttgtcttccccttgtcgtcgtctccctatcta  7566200                                          <---------GLK1(2)                                         <---------At4g35610                                     <----------DOF2        ---------->ID1           <-------TEIL          <---------MYB52(1)     <<<<<<<<<TBF1               <---------ZAT18  --------->ANAC46           <---------AHL20(2)  ---- -ARR14(2)            <----------DOF2<---------DAG2------->GAMYB   <---------GLK1(2)             <--- >ARR14(2)       ---------->ID1  --------->ZAT18  --------->DEAR3(1)     <------------------------ANAC81   ctgcttcttcttcgttttcgtcttctttatcaaggtgcgctttagcttctcaacgccgtttgatttttagaatttcgatttttttttttttttcttctag  7566300              <---------GLK1(2)            --------->LBD16           <---------ANAC55(2)           --------->ANAC46                                      --------->ARR11(3)           --------->ANAC55(2)         ----------->GT1           <---------ARR11(3)          <---------LBD16       <---------ANAC58                <---------GLK1(1)               -----       --------->WOX13(1)       <---------ANAC58 <---------ARR14(2)                             <---- ----->ARR11(3)            <-----------RAV1(1)   --------->ARR14(2)                            ------ ------ARR11(3)       ------>NtERF2  <---------MYB52(1) ------>ZmHOX2a(1)               <------ZmHOX2a(1)   ttcttgaatcaatccggaatttggcgactatgttgcttcgtttgtaaatcgtattctcctgtttagaaatcttcaattgactgtgttataggaacaattt  7566400                                                                                                  ---                                                                                                 ----                                              <----------DOF2                                   ----- --------->TOE2(3)                           <---------ANAC58     ------->TEIL        <-------------- ---->AHL20(2)                 <---------ANAC46          <---------ZAT6               <---------AHL20(2) -----AHL20(2)           <-----------GT1     <---------ANAC58 <---------TOE2(3)       <---------YAB1 --->AHL20(2)     <----------DOF2   ----------->GT1    <---------At5g28300         <---------AHL20(2)   aaatctcaatttcaatgtctcttttagtcaccttcgtgtagtaatttgcttttgaattactgttaatgaatctcaaaaaatggattttataatttgggaa  7566500                  ---------->DOF2    <----------DOF2       --------->ANAC58   <---------ANAC58       --------->ANAC58   <---------ANAC58       --------->ANAC46                    <---------ANAC58 ------>DAG2     --------->AHL20(2)                           <---------ANAC58 ----->DAG2      <---------AHL20(2)          <-----------GT1  <---------ANAC46 ----->DOF2  <---------AHL20(2)    --------->ARR11(3)     <----------DOF2 -AGL15      --------->AHL20(2)--------->CCA1(2)<----------DOF2                <----------DOF2   aaggggcttctgggtttaattaaagaacacgagataaggtctggttttttcttttcatttctttgtgtgtgtttttggtttctttgattttcttctgggt  7566600  Previous    Next  AGI:  At2g17410.1    Description:  ARID/BRIGHT DNA-binding domain-containing protein. similar to ARID/BRIGHT DNA-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76510.1); similar to ARID/BRIGHT DNA-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76510.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO68507.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068); contains InterPro domain AT-rich interaction region; (InterPro:IPR001606) Range:  from: 7566080    to: 7570834    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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