Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------MYB52(1)                                                            <---------AHL20(2)                                       <---------ICU4      <---------AHL20(1)     ----------->GT1                  --------->AHL20(2)   --------->AHL20(1)         --------------- -------RAV1(1)             --------->REM1(1) <----------DOF2    <------------------------ANAC81 ---->ALFIN1           <-----------GT1--------->ICU4     <---------ARR11(3)           <----------DOF2 -At5g28300   --------->AHL20(2)      <---------AHL20(2) <---------AHL20(1)      <----------DOF2 <--- --GT1        <---------AHL20(2)      <---------ATHB51   --------->ARR11(3)   <-----------GT1    ----   gttggcatagtaacatttaaattttaaactacatcactaaataattagctttgaaagaatatatatttctcttagttttttttcttttctttttaagtta  7556500                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                             <------ZmHOX2a(1)                                                            ----------->GT1                                                           <---------TOE1(3)      --------->GLK1(2)                                    <---------TOE2(3)   <---------YAB1             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->AHL20(2)   <---------TOE2(3)        ----------->GT1     ------>ZmHOX2a(1)<---------AHL20(2) >AGL15                    ----------->GT1      <----------DOF2  --------->AHL20(2)         <-------- ------YAB1          --------->ANAC46          --------->TOE2(3) --------->ICU4          <---------ICU4 ----->ICU4        <-----------GT1      ---------->ID1  <---------AHL20(2)          <---------WOX13(1)   ttattaagaatgtggccaaatttacccaagagttaaaattttgtcccatcctttatattttaaggaaaaaattaatagttttagagattgatttttacca  7556600                                                                                       <---------TOE2(3)                                                                                       <---------TOE1(3)                   <-----------GT1                                                  <----------DOF2                   --------->YAB1                                          --------->ANAC58              --------->AHL20(2)      <---------TOE2(3)                    --------->ANAC46      <---------LBD16                 <---------TOE1(3)                  <-----------GT1----------->GT1 --------------->AGL15      ---------->DOF2                            XXXXXXXXXXXXXXXXXXXX>MIR852 <---------------AGL15   >>>>>>>>>RAP2.2                   ---------->DOF2 --------->ANAC58 ---GT1  ----------->GT1 --------->TOE2(3)         <---------YAB1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   tttcaatttgggggaaaaaaataacaatctaaaagcattgaaggtttgaatttttgattcaaaaagacccaaaataaacgcctcatctttaggttaattt  7556700                      <--------ATHB1                      <---------ICU4                            --------->YAB1      --------->ALFIN1               ----------->GT1                                 <<<<<<<<<ARR2--------->TOE1(3)              --------->DAG2           <-----------RAV1(1)   --------->WOX13(1)<---------AHL20(2)             ---------->DOF2<---------ZAT14                 --------->MYB46(3)--------->AHL20(2)    -           <---------AHL20(2)       ------>ZmHOX2a(2)      ------------>CBF --------->TOE2(3)--------          --------->AHL20(2)--------->ZAT14            ----------->GT1--------->TOE2(3)----------->GT1   tcagaataactattaaaaagtgaataattcttcactgatccatgttggactagtaagtagtaacaatcaaatccataacattaaatgtgttgaaaaaaag  7556800                                     --------------->AGL15                                     <---------------AGL15                                    <-----------------AG                                    <-----------------AGL1                                    ----------------->AGL1                                    ----------------->AG                                    ----------------->AGL3                                    ----------------->AGL2                                --------->YAB1       --------->AHL20(2)                             --------->YAB1 ----------->GT1                            <---------AHL20(2)       <---------AHL20(2)    <---------ANAC46  <-------                --------->TOE2(3)   <-----------------AGL2              ----------->HVH21 <---------ICU4    ----------->GT1   --------->TOE2(3) --------->DAG2   *TSS   <---------MYB52(1)        --------->YAB1  ---------->DOF2     --------->TOE1(3)---------->DOF2---------->DOF2   ----------->TGA1<---------ARR11(3) -------->YAB1  --------->TOE1(3)   <-----------------AGL3      <<<<<<<<<MYB1    <----------ID1 -->DOF2        --------->YAB1  <---------ICU4    --------->YAB1<<<<<<<<<MYB2   <------ZmHOX2a(1)   <   aatcaaaagtaacaaaaaccataaccctaaataatcatcccaaaagtggaaataataaaagaagcagttagattgtgacggaggagacaaaatcatcatc  7556900                                                  <---------ANAC46                                                 <---------TOE2(3)                                          ------->GAMYB                                         <---------MYB111(2)                                         --------->MYB46(3)                                         <---------MYB111(1)              --------->ZAT6                                       ------>MYB83                      --------->ZAT14                                       ------>MYB46(1)                   <---------ZAT14                                     --------->MYB46(3)                --------->ANAC46                               <---------ICU4  ----------->HVH21     --------->ANAC58                ------>ZmHOX2a(1)    <---------MYB59                 --------->ANAC46     <<<<<<<<<TBF1            --------->ICU4 --------->TOE2(3)       --------->ANAC58 --ICU4 <<<<<<<<<TBF1   --------->TOE1(2)<---------MYB55(2)    <-----------HVH21      --------->ZAT6 ------------------------ANAC81--------->YAB1--------->TOE1(3)--------->bZIP60(1)   <-----------GT1   tctgttcttcttcttctcctctctcacatacgatgatgacccaacaaccttgacgttgatttcgatgtcacacacaacactataaataacactcttcacc  7557000                                                                                             <------ZmHOX2a(2)                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                   <---------WRKY12                                                                                  <------NtERF2                                                                                 <-----------HVH21                                                                                 ------>NtERF2------>ZmHOX2a(2)                                                                              <---------ATERF1(1)                                                                              ------>NtERF2 ---------                                                                             <---------DEAR3(1)     <                                                                             --------->ANAC46<-------                                                                            <---------LBD16 ---------                                                                      ===============================HOX2a_HOX2a                                                                      ==============================HOX2a_HOX2a                                                                   ------>ZmHOX2a(1)        <--------                                                                   =================================HOX2a_HOX2a                       <----------DOF2                             ==================================HOX2a_HOX2a             <---------ALFIN1                                <---------ARR14(2) <---------ANAC46  ---          ----------->HVH21                                  <-----------ARR10--------->LBD16--------        <---------At4g35610                --------->YAB1    --------->ARR14(2)--------->RAP2.3(1)<--        --------->At4g35610        --------->YAB1   --------->AHL20(2)------>ZmHOX2a(1)    <------ZmHOX2a(1)   tatttttgtcatctcacactttggactttggagcccaaaataatctcataaccattaaaaacaaatctcctccttctctccggcgtcaatggaggatctc  7557100      --------->GLK1(1)      <---------GLK1(1)                                 ------>ZmHOX2a(1)   <---------TOE2(2)                                 <------ZmHOX2a(2)   <---------TOE1(2)                                 =============HOX2a_HOX2a -ARR14(2)                                          <---------ARR14(2) -ARR14(3)                                      ------>NtERF2 ---ARR10                                       <-----------HVH21                                  <- >ARR14(3)                                     --------->DEAR3(1)                                  <- >ARR14(2)                                    <------NtERF2                                        <- ---------ANAC46                              --------->ATERF1(1)                                  <- --GLK1(1)                                    --------->RAP2.3(1)                                 --- >ARR11(3)                                   ------>NtERF2 ------>ZmHOX2a(1)                      --- -ARR11(3)                                   <---------RAP2.3(1)          ----------->HVH21     <---- ------>LBD16                   <---------GLK1(1)   --------->ARR14(2)  --------->At4g35610  <------- ->GLK1(1)           --------->MYB52(1)  <-----------RAV1(1)            ----------->RAV1(2) <-------GAMYB ---------HVH21  ---------->DOF2--------->GLK1(1)<------NtERF2    ---------->DOF2     ------>ZmHOX2a(1)   cgtcgtagatttccgactaaaaagaacggagaagaaatctctaatgtcgccgtcgatcctcctcttcgtaaagcctctgacgcgcttcctcttccgttat  7557200          <---------DAG2          <----------DOF2                                                           --------->ANAC58       <---------ALFIN1                                                     <---------MYB52(1)      ------>MYB46(1)                                                      --------->LBD16      -------->P                                                          <---------ANAC55(2)      ------>MYB83                                                        --------->ANAC46     ----------->RAV1(1)                                                  --------->ANAC55(2)    ------->GAMYB                                                        ------>ZmHOX2a(2)          -    --------->AtMYB61                                                    <-------TEIL------>NtERF2 --   <---------MYB55(2)                                                   <------ZmHOX2a(2)     =======   --------->MYB46(3)                                                   --------->CCA1(2)     <------ ------>MYB46(1)                                                       --------->ARR11(3)     ======= ------>MYB83                                                          <---------ARR14(2)     ------- --------->MYB52(1)                                                    --------->ARR14(2)     ------- --------MYB52(2)                                                      <---------ARR11(3)     <------ --------MYB111(1)                                                    <---------GLK1(1)       ------- --------MYB59                                                        <---------HSFB2a(1)  <---------REM1(2) --------MYB46(2)                                                    ----------->ARR10    <---------- ------>ANAC46                                                <---------ANAC58      --------->ANAC58- ------>ANAC55(2)                                             <---------ANAC46      --------->ANAC46- -------GT1       ------>ZmHOX2a(1)          <-----------GT1  <---------ANAC58      --------->DEAR3(1) --MYB52(1)   <-----------GT1            <---------AHL20(2)  <-----------------------TaNAC69(2)   <--   acctaaccaacacttttttcctctcgctcttcttcgctactgtttattttcttcttagccgatggcgtgagaagatccgtaactcgacgcctcttcacgt  7557300               ------>ZmHOX2a(2) -------->WRKY12 ------->DOF5.7(2) <---------ZAT14 =====MYC_MYB <------ZmHOX2a(2)               <-----------GT1 ---O2        --------->CCA1(2)              <---------CCA1(2)                                      - =====MYC_MYB<---------ARR11(3)          <---------ANAC46                                ------>ZmHOX2a(2) -->TGA1a    <---------ARR14(2)       <---------ANAC58                                  <------ZmHOX2a(2) -->ANAC46   --------->ARR14(2)       <---------ANAC58                                 <---------ARR14(2) ---TGA1a    --------->ARR11(3)  <---------ANAC58                                      <---------ARR11(3) -->O2       --------->AGP1      <---------ANAC58 ------->TEIL                         --------->ARR11(3) -HVH21     <---------GLK1(1)    --------->MYB52(2)      <---------TOE1(2)             --------->ARR14(2) -------->WRKY45   --------->ZAT14 <---------MYB52(1)    <---------TOE2(2)  ------>ZmHOX2a(2)      -- -------->WRKY38(1)<---------ZAT18<-------GAMYB   -------->P              <---------ARR11(3)     <--- -----GAMYB --------->GLK1(1) <---------MYB52(1) <-----------GT1<-----------RAV1(1)<-----------GT1 <-   cgttgacttatctgagatctgtgctctaatcggtttcgttgcttcgtttatctacctccttggtttctgtggtattgatctcattttccgatcttcttcc  7557400  Previous    Next  AGI:  At2g17370.1    Description:  HMG2 (3-HYDROXY-3-METHYLGLUTARYL-COA REDUCTASE 2). Identical to 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (HMG2) [Arabidopsis Thaliana] (GB:P43256); similar to HMG1 (3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE) [Arabidopsis thaliana] (TAIR:AT1G76490.1); similar to 3-hydroxy-3-methylglutaryl-CoA reductase [Euphorbia pekinensis] (GB:ABK56831.1); similar to 3-hydroxy-3-methylglutaryl coenzyme A reductase [Malus x domestica] (GB:AAL03986.1); similar to 3-hydroxy-3-methylglutaryl coenzyme A reductase [Corylus avellana] (GB:ABP04052.1); contains InterPro domain Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding; (InterPro:IPR0 Range:  from: 7556857    to: 7559283    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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