Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------YAB1                               ----------->GT1                               <---------ZAT6                              <---------YAB1                            -------->ATHB1                            --------->ATHB51                            -------->HAHB4                            <---------AHL20(2)                            --------->ATHB12                            <---------ICU4                                       --------->ANAC55(2)                           --------->ICU4                             --------->LBD16                           <---------ATHB51                          <---------HSFB2a(2)                           <---------YAB1                            <---------HSFC1(1)                         <--------HAHB4                              --------->HSFB2a(2)                         --------->YAB1                              --------->HSFC1(1)                         <---------ICU4                         --------->At4g35610                        --------->ICU4     <------ZmHOX2a(1)    <---------HSFC1(2)         --------->ANAC55(2)       <----------DOF2  --------->AHL20(2)<---------YAB1        --------->HSFC1(2)         <---------ANAC55(2) >AtLEC2    <<<<<<<<<<<<<<<<<LFY   --------->AHL20(2)      ------>ZmHOX2a(1)     <---------ANAC55(2)   atgaaacagctttagaacaatggagaataattattgttaaaattaggattccatctgtttcctataagcttccagaaacaatctcgtgatgttaagtaaa  7542600                                                                                           --------->WOX13(1)                                                                                         <---------ATHB12                  --------->MYB46(3)                                                  --------->AHL20(2)                ----------->RAV1(1)                                                  <---------ATHB12             --------->ANAC58       <---------YAB1                           --------->ARR14(2)             --------->ANAC46 --------->ZAT14                                --------->GLK1(2)             --------->ANAC58 <---------ZAT14                                <---------ARR14(2)           ---------->DOF2    --------->ZAT18               <-------TEIL    <---------GLK1(2)<-------     ---------->DOF2   --------->ANAC58               ---------->DOF2  >>>>>>>>>WRKY18<---------AHL20(2)    <------ZmHOX2a(1)  --------->ANAC58       --------->MYB52(1)      ----------->HVH21--------->WOX13(1)   cacagaggaaagtcaaagcaacaactagcaactacactatcaatagcttaagggctaaaagtttcatgagttttgacagaatttgcaattaatcaagcag  7542700                                                                                   <---------WRKY38(1)                      --------->ANAC58                                             <---------WRKY12                      --------->ANAC58                                   <---------------AGL15      <                 ---------->DOF2                                      --------->GLK1(2)             -      ---------->TaMYB80                                              <---------ARR11(3)            - --At4g35610------->TEIL   --------->ICU4  --------->YAB1        --------->At4g35610---------->DOF2<-   actattggaatatgagcctaaaagaagcaatttttggtttcaaaatcaaaacttgattcgacccatgagcagtatctaaatgaggtcaaagtagagagag  7542800                                              --------->GLK1(1)                                              <---------GLK1(1)                                        --------->LBD16                <---------GLK1(2)                                       <-----------RAV1(2)       <---------ANAC58                                       <---------HSFB2a(2)       <---------ANAC58                <---      ---------->DOF2                  --------->HSFB2a(2)    <----------DOF2                    ---- ---------ARR14(2)                     <---------LBD16       <---------ANAC58                 <------ZmHOX2a(1) -------->ARR11(3)                    ------>ZmHOX2a(2)<------ZmHOX2a(1)                    <-------- -------->ARR14(2)                    ========================HOX2a_HOX2a --------->MYB52(1)--------- -----ZmHOX2a(1)         <---------ANAC46 <------ZmHOX2a(1)  <---------ANAC58        --------->GLK1(2)   aggaacttgaaagaaggaatggaattggcgaagacgttgatccaggagatttcagtaggagtggctttcttgagattatcggaagggaatctataaggaa  7542900                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  xxx                                                                                                 ----                                                                                               <-----                                                                                               ------                <------MYB83                  --------->ANAC58                                -------            <---------MYB46(3)             --------->ARR14(2)                                 <------ZmHOX2a(2)     <---------ZAT2             <---------MYB46(3)                                            -------    --------->ANAC58            <------MYB46(1)     --------->YAB1                           --------    --------->ANAC58         <-------GAMYB <---------ARR14(2)                                -------- ------AtMYB61  <---------MYB46(3)        <------ZmHOX2a(1)                                  <------- ----->ALFIN1   <------MYB46(1) <------MYB83--------->MYB52(1)       <----------ID1          -------- -TOE2(3) <---------ZAT14   <---------DEAR3(1)--------->ANAC58  --------->YAB1               <------- >ANAC46  --------->ZAT14  <---------------------WRI1 --------->At4g35610                    --------   tggtgcaagctctgtagttggtttcaatcggcgttggtaacagaggaaacggaatcatctccgaattgataacgacgaagaacgagtgtctaatagatcc  7543000                                                                                     <------MYB46(1)                                                                                     <------MYB83                                                                                    --------->MYB59                                                                                    --------->MYB111(2)      <---------------AtSPL3                                                    <xxxxxxxxxxxxxxxxxxxx     <--------P                                                                ---------->DOF2    <---------MYB52(1)                                                  --------->AHL20(1)   <---------ANAC46                                                     --------->AHL20(2) <---------ANAC46                                                       <---------AHL20(2) ----------HVH21                                                       <---------ATHB51 --------ARR14(2)                                                      <---------ATHB12 ------->ARR14(2)                                                      --------->AHL20(2) xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                     <---------AHL20(2) ----->LBD16                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----LBD16                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) >ZmHOX2a(2)                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -->CCA1(2)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -->ARR14(1)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ->ARR14(2)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ->ARR11(1)                                                <----------DOF2   <xxxxxxxxxxxxxxxxsmallRNA(s) --AGP1   <---------LBD16 <------------CBF                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ->AGP1   ------->TEIL  *TSS----------->GT1      --------->DAG2  --------->HSFB2a(2)--------->MYB46(2) --ARR14(2)           <---------LBD16           ---------->DOF2  <---------HSFB2a(2)--------->MYB111(1) ->ARR11(3)   <-----------HVH21      <---------ZAT6        <---------DAG2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   gggtcgggtatgtacgggtcagttttcggattgtatttagagataagttgaaaagtagacactttttctacaaataatttgcaaagtaggtagtttttta  7543100                                 --------------->AGL15                   <---------DAG2<---------------AGL15                   <----------DOF2                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                <xxxxxxxxxxxxxxxxxxsmallRNA(si3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <----------DOF2             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <---------DAG2           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------HSFB2a(2)      ------>ZmHOX2a(1)        <-----------GT1             ----------->GT1      --------->HSFB2a(2) <----------DOF2          --------->AHL20(2)          ----------->GT1   <---------AHL20(2)  <-----------GT1         --------->ATHB12<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   gttattttttagaaatagacacttttctctttcctctctatttagtaaatgatttatataaccttttgttattttgttatgtagtaagataaaaacaaaa  7543200                                                               --------->YAB1                                                               <---------ICU4                                          --------->ARR11(3)   <--------ATHB1                                          <---------ARR11(3)   <---------AHL20(2)                                          <---------AHL20(1)   --------->AHL20(2)                   <                                          --------->AHL20(1)   <---------AHL20(1)                   -                           <---------AHL20(2)                 <---------YAB1            --------->YAB1                      <----------DOF2    <---------AHL20(2) --------->YAB1      <-----------GT1     -                  ---------->ID1     --------->AHL20(2)    <---------YAB1    <---------ICU4--------->YAB1              <---------DAG2     <-----------GT1         --------->YAB1     --------->AHL20(2)   <---              <----------DOF2<---------YAB1       <----------DOF2     --------->YAB1   <---------AHL20(2)           <-----------GT1<---------AHL20(2)   <-----------GT1--------->ICU4<---------AHL20(2)   <---   tttaagtcaaattttactttttctcttttttatttttacttaaatatttttactttgtttgataataatttttcataaaaaattaccatataatcatatt  7543300                                                                                           --------->ANAC55(2)                                                                                           --------->ANAC46                                                                                  --------->MYB52(1)              --------->TOE2(3)                                                  ----------->HVH21              --------->YAB1                                                    --------->MYB46(3)             <---------YAB1                                                     --------->DEAR3(2)       <---------AHL20(2)                                                       <---------MYB55(2)       --------->AHL20(2)                                                   xxxxxxxxxxxxxxxx>smallRNA(i)       --------->AHL20(1)                                              <---------AHL20(2)  --------->ANAC58  --------->AHL20(2)                                                   --------->AHL20(2)  --------->ANAC55(1) ----------DOF2                                                       --------->AHL20(2)   --------->ANAC58 -------->TOE2(3)                                                  <---------AHL20(2)   <---------ARR14(2) -------->TOE1(3)       ---------->DOF2                           <---------AHL20(2)    --------->ARR14(2) ------AHL20(2)     --------->TOE2(3)                          <---------AHL20(2)------->GAMYB xxxxxx --------GT1<---------TOE2(3)       <-----------GT1            --------->AHL20(2)--------->DEAR3(1)--   aactttaaattttttatgttaatctaaaaagactaattttgctatatttcaaaaatatgtagcatttttttatttaatttcaaccgacggtatacgcaat  7543400                                      ----------->GT1                                     <---------TOE2(3)                                    <---------ICU4                                   --------->ICU4                            --------->SPL7                     <---------REM1(1)                          --------->ZAT18               <---------AHL20(2)                          --------->ZAT14              --------->YAB1                          <---------ZAT18             <---------AHL20(2)                          <---------ZAT14            --------->AHL20(2)                          <---------SPL7    ----------->GT1   <---------TOE2(3)                         <---------ZAT6   ---------->DOF2 <---------ICU4                        <---------------AtSPL3      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                        <---------------AtSPL8     --------->AHL20(1)                              xx xxxxxxxxxxxxxxxxx>smallRNA(si3) --------->YAB1    <---------AHL20(1)      <---------WOX13(1)   xxxxx --------->GT1          --------------->AtSPL8--------->AHL20(2)        <---------ZAT6<---------YAB1   attgttaaaactggtgaacaaatgttagtgtacgataataatgtaaaagttaatatataatattgatgtaagaagtgatagaccgattacaatggtatac  7543500  Previous    Next  AGI:  At2g17320.1    Description:  pantothenate kinase-related. similar to pantothenate kinase-related [Arabidopsis thaliana] (TAIR:AT2G17340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47541.1); contains InterPro domain Protein of unknown function DUF89 (InterPro:IPR002791); contains InterPro domain Uncharacterised conserved protein UCP030210 (InterPro:IPR016949) Range:  from: 7540562    to: 7543024    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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