Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ARR11(3)                                                               --------->ARR11(3)   --------->ANAC58                                                               --------->AHL20(1)   --------->ANAC58                                                               <---------AHL20(1) <-----------GT1                        ----------->GT1                 <---------ZAT6         <---------ZAT6       < -----AHL20(2)      <---------ZAT6                  <---------YAB1         ---------->DOF2          < --->GT1        ---------->DOF2                   <---------ZAT6     <---------TOE2(3)         <-----   aattttgttttggagttttaaagtgttagtaaaattagtttgaaagtttatagtattagtgaaaatatatcaaggtttaaagtgttacccaatactactt  7537900                                                                   ---------->ID1  ----------->GT1                                                                 <-----------RAV1(1)                                                    <---------AHL20(1) ==============================                                           <-------GAMYB       <----------DOF2    --------->DAG2                                          ----------->GT1    <---------At4g35610 ====================                                        ------>MYB83--------->AHL20(2) <----------DOF2               <----------TaMYB80       -------->P  <---------AHL20(2)<---------ANAC46      ---------  ----------->GT1                       ------>MYB46(1)      --------->At4g35610 ---------->DOF2 ----------->GT1              <-----------GT1       --------->AHL20(1)<---------ANAC58      ========= ---------TOE2(3)             ---------->ID1       --------->AHL20(2) <---------ANAC58    --------->ANAC46 ---------TOE1(3)    --------->LBD16   ------>ZmHOX2a(1) <-----------GT1      --------->YAB1--------- -----DOF2----------->GT1    <-----------GT1<---------MYB52(1) ======================================   tgaaggttaaaaatgtgatattccccaaatttttccttctcctaccgttacaattttattttcagctttgttgctttcaaaaataaagttacacacatca  7538000                                                                             --------->AHL20(2)                                                                             <---------ICU4                                                                             --------->ATHB51                                                                             <--------ATHB1                                                                             <---------AHL20(2)                  <-----------RAV1(1)                            --------->ATHB12   <---------GLK1(2)                                             --------->ATHB51 =bZIP_DOF        --------->ALFIN1                              <---------YAB1             <--------- =bZIP_DOF     --------->DAG2                                   <---------AHL20(2)      --------->ARR11(3) >ANAC46      ---------->DOF2                                --------->AHL20(1)         <---------ARR11(3) ========================bZIP_DOF                <---------AHL20(2)         <---------ATHB51 >TGA1a<---------YAB1 <---------ZAT18     ----------->GT1    <---------AHL20(1)     ---------->DOF2 =bZIP_DOF --------->AHL20(2)         --------->ATHB12      --------->YAB1  <---------ATHB12      <--   gtctagcttctcattaaaaagtgttgcacttaattgttcttgatttgttatataaacttcaaaaatattattggctcaataatttagaaagaacttttca  7538100                                                                                         <----------DOF2                                                                                        <---------ANAC58                                    --------->AHL20(2)          --------->GLK1(2)       <---------ANAC58                             ----------->GT1                    <-----------ARR10  ----------->GT1                           --------->ANAC55(2)        <---------AHL20(2) <---------AHL20(2)   <------ -DOF2<----------DOF2  <-----------HVH21             --------->AHL20(2)<----------DOF2<-----------GT1 -------ATHB12        --------->ANAC46<---------ANAC55(2)      <---------GLK1(2) ---------->DOF2    -   atctttcactttgttaacatgtctaagtcacatgttaattacatatatgtctatattaaatgtcagaatctagctttaatttgcaaagttactttccttt  7538200       <------ZmHOX2a(1)                                                                            <       ----------->GT1                                                                              <      ----------->GT1                                                                               < ----DOF2                       <---------AHL20(2)                                             <----- -------->MYB52(1)          ------>ZmHOX2a(1)            ---------->DOF2    *TSS               ======   gctaacagaggataaatacagtctcttctcctatttttttttgttcagagctataactccaaagtccaaactaaactaagaacagaaaacctcatggctc  7538300         --------->ALFIN1       <-------GAMYB                       <---------ARR11(3)       ================================MYC_MYB  --------->ALFIN1                         --------->ARR11(3) --------->LBD16                          <---------CCA1(2) <---------LBD16                     ------>NtERF2 ---------ANAC58                    <---------ALFIN1                                           ------ ---------ANAC58             --------->TGA1a                    <---------ANAC58              ------- ---------ANAC46             <---------TGA1a                    <---------ANAC58              ------- -----DOF2    <------ZmHOX2a(1)----------->RAV1(2)           <---------ARR14(2)        <----------DOF2 ======================================bZIP_DOF              --------->ARR14(2)  <---------GLK1(1)   ttccgtgggagttggaggaagacatactctctcgtctgccacctatatctcttgttcgattcagaaccgtgtctaaacactggaactctcttttcaacga  7538400                                    --------->LBD16                  <---------ANAC55(2)                  --------->ANAC55(2)         <---------ARR11(3)           --------->ETT(2)               <---------ATHB12    <---------HSFB2a(2)                     <---------ETT(2)      --------->YAB1               --------->HSFB2a(2)             <---------AHL20(2) ->GAMYB     --------->YAB1       --------->SPL7                <---------ARR11(3) -->ANAC46   --------->WOX13(1) <---------SPL7--------->ARR11(3)--------->ARR11(3)      --------->YAB1 -->MYB46(3)--------->MYB46(3)  <-----------HVH21  <---------WRKY18(1) --------->MYB59 <------ZmHOX2a(2)   caagactttcatcaacaatcacttgtctcgctcccgtcccgaattcattatcttgaccaattccaagatttattcggtagacatcatcgatcacaacaac  7538500                  <---------ANAC58       <-------TEIL                  <---------ANAC58   --------->ARR11(3)                  <---------AtLEC2   <---------ARR11(3)   <---------GLK1(2)                  <---------ANAC46  --------->YAB1        <---------ARR14(2)            --------->DAG2         <---------YAB1     <-------TEIL            <---------TOE2(3) ------>MYB83          <---------SPL7            <---------TOE1(3) ------>MYB46(1)     <------NtERF2                   <---------ANAC58        --------->YAB1       <---------ALFIN1    --------->LBD16                  <---------ANAC58    --------->TOE1(2)       --------->MYB46(3)  <---------LBD16           --------->YAB1   --------->MYB46(3)    --------->GLK1(1)     <---------LBD16            --------->AHL20(2)  <------ZmHOX2a(2)      --------->CCA1(2)--------->YAB1  --------->ARR14(2)<---------YAB1   --------   atcgatccaacgataaggttgcatgagatacccacctatgatattcatagccggggtacagatttgaatcgcacaattataaatacttgcgatgagttct  7538600                                      --------->HSFB2a(2)                                      <---------HSFB2a(2)                         <---------ATHB12                                     <---------LBD16                        --------->ANAC58                                <---------At4g35610           --------->MYB52(2) --------->GLK1(2)                                --------->ZAT2            ----------->GT1   --------->ANAC58<--------         --------->MYB52(1)     --------->At4g35610     <-----------RAV1(2)--------->ZAT18<---------ZAT14     <-----------GT1            <---------ZAT2  --------->ATHB12       <---------------AtSPL8       < ->ARR11(3)                ----------->HVH21    <---------MYB46(3)    ------>ZmHOX2a(2) <---------GLK1(1)   tgttttataactatcggtattgggacaacatgacagctctctggaatccatggttgagacaggttagatggatcgagtacgcgaatcaagagttctgtgt  7538700                                            <------ZmHOX2a(2)                                           <---------ARR11(3)                                           <---------ARR14(2)                                           --------->ARR14(2)                                           <-----------ARR10                --------->YAB1             --------->ARR11(3)               <---------YAB1              --------->AGP1           --------->SPL7                  <---------AGP1             ---------->DOF2            ----       <---------------AtSPL3   --------->DAG2                      --------->At5g28300          <---       <---------------AtSPL8 ---------->DOF2------>ZmHOX2a(2)    --------->ANAC58      ---------->DOF2 -ANAC46 <---------SPL7    --------->ANAC58--------->ARR14(3)     --------->ANAC58  <------ZmHOX2a(2) ---------RAP2.6(2)        --------->ANAC58<---------ARR14(3) <-----------HVH21   <---------GLK1(1)--   tttcggcttagggtacgataatagtagacccgaaaaggtttacaagatcttgggccatttgttttgtcacggtaaagtcttgagagatcagaaagttgtg  7538800  Previous    Next  AGI:  At2g17310.1    Description:  SON1 (SUPPRESSOR OF NIM1-1 1). Identical to Protein SUPPRESSOR OF NIM1 1 (SON1) [Arabidopsis Thaliana] (GB:Q8LL17); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G17710.1); similar to unknown [Arabidopsis lyrata] (GB:AAL65603.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 7538276    to: 7539494    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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