Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->REM1(2)                                          <---------ANAC46                                         <-                                      <---------ANAC58                   <---------ANAC58         ---                   <------MYB83       <---------ANAC58                   <---------ANAC58        <---                   <------MYB46(1)    <---------ANAC46          <------MYB46(1)             <--------          --------->HSFB2a(2)      <---------MYB52(1)           <------MYB83              <----------          <---------HSFB2a(2)    <-----------RAV1(1)        <-----------RAV1(1)   ------->GAMYB <---- ---->ALFIN1 ---------->DOF2 <---------GLK1(1)             <---------TOE2(3)  --------->ETT(2)  -----   ggtggaagcgttttggaaagttggtcatttgaaatctgttgcttctgtgaagaagcttgataatgttggtgctaggcttgtcaacagcgtctccagatga  7516800      <---------At4g35610    <---------ZAT14    --------->ZAT18                                                                               ---   <---------ANAC58                                                                <---------HSFB2a(2)   <---------ANAC58                                          <---------ATHB12      <---------HSFC1(1) ---------DOF2                                              ------>MYB46(1)        --------->HSFB2a(2) --->ZmHOX2a(2)                                             ------>MYB83  ----------->GT1         <-- ------YAB1             --------->ATHB12         --------->ATHB12         <---------ZAT6       ------ -At4g35610            <---------TOE1(3)        <---------TOE2(3)     <---------ZAT14      --------->YAB1 -RAV1(2)              <---------TOE2(3)        <---------TOE1(3)     --------->ZAT14   --------->YAB1 -----ARR11(3)         <---------YAB1           <---------YAB1      --------------->AtSPL8<---------YAB1 ---->ARR11(3)    <---------YAB1           <---------YAB1--------->MYB46(3)--------->At5g28300-------   tctttgtgtgctgtttgattatgttaagattggaactgtttgattatgttaagattggaaccaatcttgctctgtactgtaatttctagatgataataaa  7516900                                                              <---------HSFB2a(2)                                                              --------->HSFB2a(2)                                                           <----------DOF2                         <---------WRKY12                 <---------ANAC58 <----------DOF2       <------ZmHOX2a(1)                  <---------ANAC58 ------>ARR11(3)   ---------->DOF2                 <----------DOF2           <---------ANAC58 -------ARR11(3)  <---------ATHB12              <-----------------AGL3       <---------ANAC46 --->DAG2   --------->REM1(1)                   ===================================================== --->DOF2   --------->ANAC46                   <---------At4g35610           <---------ANAC58  <-----   gttctttgttttctacaccaataaaggacaacgttttatgtgtttgtttagctctttttggcttctgggagtatgaattgtgtgagacttgagagtatca  7517000                                           --------->ANAC58                                           --------->ANAC58                                <---------DAG2                                --------->TOE2(3)                                --------------->AGL15                                --------->TOE1(3)--------->TOE2(3)                                <---------------AGL15        <---------ATHB12       ----------------->AGL2                          <---------YAB1 ===============================================MADS_MADS                  <----------DOF2         -- ------GT1                   <-----------GT1     <----------DOF2     <---------At4g35610--------->ZAT18   cactctccaaatcagtagcaaaattgagtttcaaccttatgtagcaaacaactttagtcactgactagtggagcaaactttatagttgagagcccaaact  7517100                                                                                <---------RAP2.6(3)                                                                                --------->LBD16                                                                                ------>NtERF2                                                                               --------->DEAR3(1)                                                                               --------->ATERF1(2)                                                                               <---------ATERF1(2)                                                                               --------->RRTF1(2)                                                                               --------->RRTF1(3)                                                                               --------->DREB2C(2)                                                                               --------->RAP2.3(3)                                                                               --------->RAP2.6(2)                                                                               --------->RAP2.3(2)                                                                              --------->ERF1                                                                     <---------ARR11(1)                                                                  --------->MYB46(3)                                                                --------->MYB52(1)*TSS                                                         --------->At5g28300  <---------LBD16                                                     <---------DOF5.7(2)      --------->RAP2.3(1)                                                     --------->MYB52(1)       --------->ORA47(2)                                                    ----------->HVH21--------->GLK1(2)                                                   --------->DOF5.7(2)        --------->ATERF1(1)                                                ----------------->AGL1   <---------ARR14(2)                                                <-----------------AGL1   --------->ARR14(2)                                                <-----------------AG<---------ARR14(1)                                            <---------ICU4  --------->DAG2  --------->ANAC46                                           <---------AHL20(2)--------->ANAC58--------->LBD16                                           --------->AHL20(2)--------->ANAC58------>NtERF2   --------                                           <---------ATHB51---------->DOF2 --------->MYB46(3)--------                                         --------->YAB1 ------->GAMYB------->TEIL<------NtERF2             ----------------->AGL1  --------->YAB1<---------MYB52(1)<-----------ARR10       <-------         ---------->DOF2         <------ZmHOX2a(1)--------->LBD16 <---------MYB52(2)    <------ZmHOX2a(1) -------->DOF2------------>CBF<------ZmHOX2a(1) <---------LBD16<----------ID1<---------ATERF1(1)   ataaggcccatgaaagcccaatttggagaagaggaggactcataaataattccggtaacggtaaagcaacgaatctatccgccggcatgaggaaacctaa  7517200                                          -------->P                                          ------>MYB83                                         ------>NtERF2                                        --------->AtMYB61                                        <---------ALFIN1                                        --------->DEAR3(1)                                      --------->LBD16                                      ------>NtERF2                                     --------->ANAC46                                  <-----------GT1                           <-------TEIL --------->MYB46(3)                          --------->CCA1(2)                      <---------DAG2                          --------->ARR14(1)         ---------->DOF2       <---------YAB1    <---------GLK1(2)------>MYB46(1)        <----------DOF2    ---------->DOF2     <-----------GT1     --------->ARR11(1)        --------->ANAC46             ----------->GT1 ->TOE1(3)               --------->ARR14(2)       <---------HSFB2a(2)          --------->DAG2      <- ->TOE2(3)               <---------ARR14(2)       --------->HSFB2a(2)         ---------->DOF2  <----- --MYB59             ---------->DOF2<---------LBD16--------->LBD16     <---------MYB46(3)      <-----   attgaaattaccattttttctcttaaagattcgatttttccgccaacccgttcccgaaagcttggaactttatttgttgaaaaagtaaaagagagagcct  7517300                                 --------->O2                                 <---------O2                                                    <---                                 --------->TGA1a                                                 ====                                 <---------ANAC46                                               -----                                 <---------TGA1a                                                <----                                 <---------ANAC58                                              ------                                 <---------ANAC58                                              <-----                           <-----------HVH21                                                   <-----                           --------->LBD16                                                     ------                          <---------ANAC58    <------ZmHOX2a(2)                       <----------DOF2                          <---------ANAC58    --------->GLK1(1)                       ===============                    =======================bZIP_DOF                           <-------TEIL<---------- --------ANAC46     <----------DOF2--------->ALFIN1                        --------->ANAC58 <-------- ----ANAC58   <---------ANAC58   <---------bZIP60(2) --------->YAB1        --------->ANAC58 ========= ----ANAC58   <---------ANAC58----------->HVH21------>ZmHOX2a(2)          <---------TOE1(2)<---------DAG2   tgtgtttatttctgagccttgtctttgtccgtgagacgtggacgagcgatctccatcagaaaatgagaacccttcccacgtacacactctttgcctttcc  7517400                <---------ANAC46                <---------bZIP60(2)                <---------ANAC55(1)                <---------O2                --------->O2                --------->TGA1a                --------->ANAC55(2)                <---------ANAC55(2)                <---------ANAC58                <---------TGA1a                <---------ANAC58               ----------->STF1             ----------->TGA1             ----------->HVH21      <----------DOF2      ====================bZIP_DOF     <---------ANAC58     <---------ANAC58 -------DOF2<-----------HVH21 =========================bZIP_DOF ---------->AGL15 -----------AGL15 ----------->AGL2                                                 <------ZmHOX2a(2) ------------AGL2              <---------LBD16                   <---------ARR11(3) ------------AGL3   <---------CCA1(2)                            --------->ARR11(3) ----------->AGL3 --------->ALFIN1                           ---------->DOF2 =========================bZIP_DOF                        <-----------HVH21 --------------ANAC81        --------->ARR14(2)           --------->TOE2(3)                    <----- --DOF2    ------>ZmHOX2a(1) <---------ARR14(2)          <----------ID1<----------DOF2         <----- =========================bZIP_DOF                    <---------ARR14(2)                 <---------YAB1   ttttatagctttcctgtgacgtgtttcttcgtttctgggttttgggtttactagcgaaaacgtcaaagatcaacttttgttctgagagattacgattagg  7517500                                                                               <---------TOE1(2)                                                                               <---------TOE2(2)        <---------ARR14(2)                                             <---------ANAC58        --------->ARR14(2)                                             <---------ANAC58     --------->LBD16                                             --------->ARR14(2)    <---------LBD16                                              <---------ARR14(2)   <---------LBD16                                              <------ZmHOX2a(1) ----TOE1(3)                                        --------->ZAT18  <-----------HVH21 ----TOE2(3)                     --------->At4g35610<---------ZAT14<------------AtMYB77<-----------GT1   gtttatcggggattttgaaacgatttttggtaagaagatgacaagagtcaagagtaaactagacgaggaactgtcgtctccttggttttatactgtttgt  7517600                           --------->ANAC58                           --------->ANAC58                      <------NtERF2                     --------->LBD16                    <---------ATERF1(2)                    --------->ATERF1(2)                    --------->HSFB2a(2)                    --------->ETT(1)                    <---------HSFB2a(2)                   <---------LBD16                          ---------->DOF2                   <------          --------->ICU4   -------->P                     ------>ZmHOX2a(1)            <----------DOF2       <------ZmHOX2a(1) --------->MYB46(3)    ------>ZmHOX2a(1)                   <-----------GT1   accatgggaggaatgcttagtgccggaacaacccatttggctataactcctcttgatgtcctcaaagtcaatatgcaggtttgtgtttcctttctctgct  7517700  Previous    Next  AGI:  At2g17265.1    Description:  HSK (HOMOSERINE KINASE); homoserine kinase. similar to homoserine kinase, putative / HSK, putative [Arabidopsis thaliana] (TAIR:AT4G35295.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67551.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain GHMP kinase, ATP-binding, conserved site; (InterPro:IPR006203); contains InterPro domain Homoserine kinase; (InterPro:IPR000870); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain GHMP kinase; (InterPro:IPR006204) Range:  from: 7515670    to: 7516837    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g17270.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial phosphate transporter [Arabidopsis thaliana] (TAIR:AT5G14040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47536.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) Range:  from: 7517182    to: 7519469    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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