Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->GLK1(1)                                           --------->WOX13(1)              --------->ARR11(3)                 <---------ZAT6  >>>>>>>>>TBF1              <---------ARR11(3)         <----------DOF2   <------ZmHOX2a(1)  <---------ICU4   gaatgaaacatcgagagatatcgaagagcattttttgtttcaacttttgtagtgttttggaggagaagaagaagagtcaatcttttctcacatttagttg  7506200                                                                                    <---------HSFB2a(1)                                                                                    --------->HSFB2a(1)                               <---------CCA1(2)                                    <---------HSFC1(2)                              <---------AHL20(2)       <---------At4g35610          --------->HSFC1(2)                      <---------ANAC58               --------->HSFB2a(2)           ------->TEIL    <---------AHL20(2)<---------ANAC58               <---------HSFB2a(2)       --------------->AtSPL8   --------->AHL20(2) <---------ANAC46       ----------->RAV1(1)      ------>ZmHOX2a(1)  <----------DOF2   ctagatttaatctcatactcgtgttcgtgtattatatctgtgtaatgccacagtttcagaagctatgttatcctttcgaaattcgaaccttctttgtgta  7506300                                                                                              -------                                                                                              -------                                      <----------DOF2                                         -------             <-----------GT1    ------>ZmHOX2a(1)                            <---------MYB46(3) -----        ----------->GT1  <----------DOF2                               <----------DOF2      <--------   agtagacagagggtttaactaatctctctttctccttacactttgtatgttgaaatatagtatcacaaacattctttagtggttatctctgagtaaacga  7506400   <---------ANAC58   <---------ANAC58 --------->MYB52(1)                     <---------CCA1(2) <---------ARR14(2)                     --------->GLK1(1) --------->ARR14(2)        --------->ATHB12                                                  <------- -->ANAC58              --------->ANAC55(2)           --------->TOE1(3)                   --------->ARR14(2) -->ANAC46         <----------DOF2     <---------KAN4(2)                                  <---------ARR14(2) -->ANAC58        ------>ZmHOX2a(2)    ---------->TaMYB80                                <---------CCA1(2) ----->DOF2     <---------ARR11(3)  ----------->GT1<-----------GT1----------->GT1   <----------ID1 -DOF5.7(2)     --------->ARR11(3)  <---------ANAC46  --------->TOE2(3)        --------->ATHB12    --   aagtatcgggccaaatttgatcttttacatgatttgaggggtatatccaaaattaaccttagttaaaaatgaaaaaacaaatgtttgggccaaatctcga  7506500                                       <---------MYB52(1)                                     <---------ANAC55(2)                                     <---------ANAC58                                     <---------ANAC46                               <---------TOE2(3)           *TSS                            <---------AHL20(1)           <-------MYC3                            --------->AHL20(2)           ------->MYC3                            <---------AHL20(2)    --------->ANAC58    --------->ZAT6          --------->AHL20(1)    --------->ANAC58  <-----------GT1        --------->AHL20(2)   <-----------GT1             <------MYB83 --HSFB2a(2)          --------->YAB1 <---------ANAC58 <---------ALFIN1    <------MYB46(1)      ------ --------->GT1----------->GT1<---------AHL20(2) --------->ZAT6           --------->MYB59       <-----   aatgttacactacttggggtttaaacataatataatgtttcgtgagtttaacacgaccacgttttgtttgcaagttaggttttgttatgcctctctcagc  7506600                              --------->ANAC58                              --------->ANAC46                              <---------MYB52(2)                              --------->ANAC58                             ------>NtERF2                          ---------->DOF2                          ------>NtERF2                     <---------ARR14(2)                          --------->LBD16                   --------->ARR14(2)                         --------->ANAC58                  --------->WOX13(1)                         --------->ANAC58                <------NtERF2                         --------->ANAC46                <---------------------WRI1   <----------ID1                       <---------ATERF1(1)              <-----------HVH21             --------->ANAC58                      --------->ARR14(2)               --------->bZIP60(1)            ----------->GT1                    <-----------HVH21                  <---------bZIP60(1)       <---------------AtSPL8           <<<<<<<<<TBF1<---------LBD16                <---------ANAC58      --------->At4g35610        <<<<<<<<<TBF1 <---------ARR14(2)   --------->At4g35610  ------>ZmHOX2a(1)>>>>>>>>>TBF1 --->At4g35610     --------->DEAR3(1)   ---------->DOF2<---------ANAC58   --------->At4g35610 ----At4g35610  <---------ALFIN1 ------->TEIL          <---------ANAC46---------->DOF2--------->ANAC58   taaacccttcttcttcttccaccgtctccgccacgaaccagagaaagctcaacaatggcgtcaatcctctcaaagaagcagaagaagaacgaaaaataca  7506700                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                -----                    <------MYB83                                                               <-----                    <------MYB46(1)                                                         <--------               --------->ATHB12                                      ------>ZmHOX2a(1)      <--------               --------->YAB1                           <-----------GT1                    <---------ARR14(2)               <---------ICU4                ------>ZmHOX2a(2)  ------>ZmHOX2a(1)          --------->GLK1(2)              --------->ICU4                 ===============================HOX2a_HOX2a    <---------              <---------ATHB12               ==========================HOX2a_HOX2a         --------->ARR14(2)       --------->At4g35610              <---------HSFB2a(2)  ------>MYB46(1)              --------->ARR14(2)  ---------->DOF2  --------->MYB59      --------->HSFB2a(2)  ------>MYB83                 <---------GLK1(2)   ccttgaaagagctcaaatcattaggtcatgacttactcacttctcgatctcacatcaataaccttcctctccttctcaccttcgtctcaccagaatctcc  7506800    <---------ARR14(2)    --------->ARR14(2) <------NtERF2 ------NtERF2 -------->LBD16 ----->NtERF2 ------->RAP2.3(2) --------->RAV1(1) ------->RRTF1(3) ------->DEAR3(1) ------->RRTF1(2) ------>RRTF1(1) ------>RAP2.3(1) ----->At4g35610 ----->LBD16 -->NtERF2 ------ATERF1(1) ---->DEAR3(1)                       <----------DOF2        <---------At4g35610 ---->ANAC46                         ------>ZmHOX2a(1)      <---------ZAT2 ----LBD16                        <---------ATHB12 --------->ZAT14   ------>NtERF2           -------- -GLK1(1) <-------GAMYB     --------->ANAC58    ------>ZmHOX2a(1) ------>ZmHOX2a(1)         --------- -HSFB2a(1)            ------>ZmHOX2a(1)  <-----------GT1   --------->At4g35610     ------>ZmHOX2a(1) --ARR10 <---------MYB46(3) --------->ANAC58--------->ANAC46--------->ZAT2     ---------->ID1------->GAMYB   gccgcagttcgtcgttgaatcactcctctcactccaatcctttttcactcctctactctctcagcttcctccgacttcttcgtctccttcttcaaccaaa  7506900                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----    --------->ZAT18                                                                     --------->WOX13(1)    <---------ARR14(2)            <---------At4g35610                                  --------->MYB46(3)    --------->ARR14(2)            --------->At4g35610        <----------DOF2   <---------CCA1(2)-----   <------ZmHOX2a(1)     <---------ANAC58         <---------ARR14(2)           ---------->ARF1  <---- ->AtMYB61               <---------ANAC58         --------->ARR14(2)       <---------ANAC58    ------ >MYB46(3)           ---------->DOF2<------ZmHOX2a(2)  --------->WRKY18(1) <---------ANAC58--------->YAB1   acagaggaccctgaagttgtgttcaaagcttggctcagatcaaaatttgacgaattcgtcaagcttttactcgatgttcttgtctctcaacaatcagaag  7507000             <---------ARR11(3)             --------->ARR11(3)           ----------->ARR10     <---------TOE1(3)     <---------TOE2(3) ------>ARR14(1) ------>GLK1(2) ------GLK1(2) ------ARR11(3)                                                                         <--------P ----->ARR14(2)                                                                         <---------WOX13(1) ----->ARR11(3)                                                                       <---------MYB46(3) ------ARR14(2)                                                              ------>MYB83 ---->HSFC1(2)                                                               ------>MYB46(1) -----HSFB2a(1)                                                            <---------MYB59 ---->HSFB2a(1)                                   <-------TEIL            --------->ANAC55(2) -----HSFC1(2)   <-----------GT1   <---------ANAC58                       <---------ANAC55(2) ----->ARR10 <---------GLK1(2)     <---------ANAC58      <----------DOF2<-----------GT1<-------GAMYB   attctctaagggtaagatttttctatctatcttctctgcgttctcttgaagttacatagctttgttattttttgttacctaatgtttttggttgatttag  7507100  Previous    Next  AGI:  At2g17240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24506.1); similar to unknown [Populus trichocarpa] (GB:ABK93895.1) Range:  from: 7505212    to: 7506288    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g17250.1    Description:  EMB2762 (EMBRYO DEFECTIVE 2762). similar to Os04g0585300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053677.1); similar to OSJNBa0013K16.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE03760.2); similar to hypothetical protein OsJ_015261 [Oryza sativa (japonica cultivar-group)] (GB:EAZ31778.1); contains InterPro domain CBF (InterPro:IPR005612) Range:  from: 7506559    to: 7510207    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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