Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->AtMYB61                                                                       ------>NtERF2                                     ------>ZmHOX2a(2)                --------->DEAR3(1)                                     <---------LBD16                  --------->RAP2.3(3)                                    --------->ARR14(1)                --------->RRTF1(3)                                    <------ZmHOX2a(2)                 <---------ALFIN1                             <---------O2                          --------->ANAC46                      ------>ZmHOX2a(2)                            --------->ANAC58                    --------->AGP1 --------->ARR14(2)              --------->ANAC58                    --------->ARR14(2)                           --------->ALFIN1      --------->LBD16<------ZmHOX2a(2)             <---------ZAT14--------->SPL7      ------>NtERF2 ------->TEIL <---------MYB46(3)--------->ZAT14<---------ZAT18     <---------DEAR3(1)      <---------TGA1a       --------->REM1(2)<---------ATERF1(1)    <---------LBD16 --------->ARR11(3)         ------>ZmHOX2a(2) <---------ATERF1(1)               <- ------->ARR14(2)   <---------ARR14(2) --------->LBD16        --------->ALFIN1               -------- --------ARR14(2)   <---------AGP1 <---------ARR14(2)         <---------DEAR3(1)----------->HVH21<---   gtattctccggcgattaaaacggatctagagacgttggatccggtttgatctgtgtagagagaagcggtgcgccaccattcggagacggagggagaaggt  7502700                                                     ----------->HVH21                                                   <---------ANAC58         <---------ANAC46                                                   <---------ANAC58        <---------TOE2(3)                                                <---------RAP2.3(3)       <---------DOF5.7(2)       <---------ANAC46                        --------->ALFIN1    --------->SPL7     <-----------HVH21               <---------TOE2(3)  <---------YAB1    --------->MYB52(1)    <---------ANAC58           <---------YAB1<---------ANAC58    <---------SPL7    <---------ANAC58     <---------GLK1(1)   <---------ANAC46   <---------ANAC58 ---------DOF2       <---------TOE2(3)       <-----------RAV1(1)<---------ANAC58 --------->ARR11(3) ->DAG2<---------DEAR3(1)--------->GLK1(1)   <---------ANAC58  --------------->AtSPL3    ------>ZmHOX2a(2) ----TEIL<------NtERF2 <------ZmHOX2a(1) <---------GLK1(1)     --------------->AtSPL8    ============   gctttagcgtcggagatagaattgaggaaatctctgattagggatttgtgtgggcgtgaccattgtccgtaccagataacgtagatgttgatcggagaag  7502800                                                                                               <-----                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                          <------NtERF2                                                 ------>ZmHOX2a(1)                      <---------ANAC46                                                --------->TOE1(2)                      <------NtERF2                                               --------->HSFC1(2)                      <---------LBD16                                               ------>ZmHOX2a(2)                       ------>NtERF2                                               =========================HOX2a_HOX2a    --------->At4g35610                <-------MYC3                   <---------HSFB2a(1)                    ------>NtERF2                ------->MYC3                   <---------HSFC1(2)                     <---------ATERF1(1)          <---------TCP20     --------->ZAT18 <------ZmHOX2a(2)                      <---------DEAR3(1)          --------->PCF2      <---------ZAT18 ==========================HOX2a_HOX2a --------->At4g35610          --------->PCF5     --------->ALFIN1--------->ARR14(3)                     <---------At4g35610          <-----------------AGL1   ----------->ARR10    <---------AHL20(2)          ------>NtERF2         <-----------HVH21<---------AtMYB61  --------->ARR14(2)                     --------->LBD16    <------ZmHOX2a(1)     --------->ALFIN1   --------->ARR11(3)                     <---------LBD16   <---------ZAT14        <---------DEAR3(1) <---------ARR11(3)                   <---------LBD16   --------->ZAT18   --------->MYB52(1)      <---------ARR14(2)      --------->ALFIN1--------->ANAC46 ==========HOX2a_HOX2a  ------->GAMYB        <---------ARR14(3)  <------ZmHOX2a(1)---------->CDC5   atgagaggactggtcccatgtggtaacggaggtggactagatttgaagatccttcgaattttttggaggatgtgagggagagactccgcggcggaagctt  7502900                             --------->ALFIN1                             <---------ANAC46                            <------NtERF2                            --------->ATERF1(1)                           <---------SPL7                          --------->ALFIN1                          <---------ANAC46                          <---------DEAR3(1)                         ------>NtERF2                        <---------ATERF1(1)                        ------>NtERF2                       <---------DEAR3(1)                       <------NtERF2                      <---------At4g35610                      <---------LBD16                      --------->LBD16                      <------NtERF2                      --------->At4g35610                      ------>NtERF2<---------RVE1(1)                     --------->DEAR3(1)                     <---------ATERF1(1)                    --------->ATERF1(1)                   ------>NtERF2   <---------CCA1(1)                   <---------ATERF1(1)             <---------MYB46(3)                   --------->LBD16--------->ARR11(3)                  --------->DEAR3(1)            --------->MYB52(1)<-------GAMYB         --------->YAB1--------->ATERF1(1)      <---------DOF5.7(2)         <---------ANAC46<------NtERF2     <------ZmHOX2a(1)     <---------MYB46(3)         <---------ANAC58--------->ATERF1(1)  --------->DOF5.7(2)--------->MYB52(2)               <--         <---------ANAC58<---------LBD16 <---------TOE2(3) <---------ANAC46             <---------ZAT14 -----DOF2        --------->ANAC46<---------ARR11(3)     <---------ANAC46         --------->HSFB2a(2) --HSFC1(2)      <---------LBD16  --------->ARR14(2)  <---------MYB46(3)          <---------HSFB2a(2) ->HSFC1(2) --------->ARR14(2)    <---------ARR14(2) <--------P  <-----------RAV1(1) <---------ANAC46 --HSFB2a(1)<---------ARR14(2)  ----------->GT1 ------------>AtMYB77             <---------LBD16  <--   tgggtttactagcgtaatctccgccgcggcggaggggatatttaaggagttaacggttgctgtgtgtttgttgttgttgttgttctggagtgaagaagtg  7503000                                                        --------->ANAC58                                                        --------->ANAC58                                                      <---------ATERF1(1)                                                    <------NtERF2                                                   --------->LBD16                                                  --------->DEAR3(1)                                                 <---------LBD16<---------YAB1                                                 <------NtERF2 --------->TOE2(3)         <------ZmHOX2a(1)   ---------->DOF2     --------->ATERF1(1) -------REM1(1)         >>>>>>>>>TBF1          <---------DEAR3(1) -------ANAC46      <---------ZAT14           --------->ATERF1(1)             --------->ALFIN1    *TSS   atgtagaagaaggatgagagagtgaagaagaaaaagaaggtgatagtagtcgccggagacgacattgttaatggttaagagtgagggttttggcaagtga  7503100                                                                      --------->ZAT14                                                                   <---------At4g35610                                                                   --------->At4g35610                                                                   --------->ZAT2                                                                   ----------->RAV1(2)                                                                   <---------ZAT2                                                                  ------>NtERF2                                                                 <-----------RAV1(2)                                                            <-------GAMYB                  --------->ANAC58                                                            --------->At4g35610            --------->ANAC58                                                            <---------At4g35610            --------->ANAC46                                                           <---------MYB46(3) <---------ANAC58                                                           <-----------RAV1(1)<---------ANAC58                                                           ==================RAV--------->ALFIN1                  <---------YAB1                           ====================RAV       --------->ANAC46             --------->CCA1(2)    <------ZmHOX2a(1)  <------------CBF <---------ZAT14 <---------REM1(2)    <------------CBF     ---------->DOF2        ----------->GT1  <---------ATERF1(2) <-----------HVH21   agaagagattgagagatttgatgattttaaaggagaggagaaagaatgagagggaaattggctgttgccagctgcagtgagcgtgggcttcacgcgctag  7503200                                                                                               ------                                                                                              -------                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                      --------->ARR11(3)     --------                                                                      <---------ARR11(3)  --------->YAB1                                                      <---------GLK1(1)              --------->AHL20(2)        <---------ANAC58               --------->AHL20(2)     <---------DAG2    --------->AHL20(2)        <---------ANAC58         ----------->HVH21    --------->GLK1(1)  <----------DOF2  --------->AHL20(2)   ccttgttgttgtttgtctgtcttcttctcttggggatgacataaatttgggatgggatttctcaatttttgagttctttaaaaaatataaaattataaag  7503300                                          <---------YAB1                                        <---------ICU4                                       <---------YAB1                                      <---------GLK1(2)                                    --------->ICU4                                               <---                          <---------AHL20(2)                           --------->GLK1(2)        -----      --------->YAB1      <---------AHL20(1)               <-----------GT1 <---------LBD16  <--------     <---------YAB1       --------->AHL20(2)               <---------AHL20(2)           ----------->GT1 ----->GT1                --------->AHL20(1)       <---------YAB1      --------->ARR14(2)   --------- -->DAG2                 <---------AHL20(2)      --------->YAB1        <---------ARR14(2)----------->GT1 -->DOF2                 --------->AHL20(2)     <---------YAB1  ---------->DOF2     ---------->DOF2   tgatactataatacagagttgaagaaattaaatttgtaaagattattactatgatgtttattaacttgaagcgaatttgtggaaatgaaagtgataaatt  7503400                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)       <xxxxxx                                                                   <---------AHL20(2)         xxxxxxx       --------->ARR14(2)                                          --------->AHL20(2)         <xxxxxx       <---------ARR14(2)                                      --------->AHL20(2)<---------AHL20(2)   <---------LBD16                                 <---------YAB1<---------AHL20(2)  <---------AHL20(2) ------AHL20(2)                                 <---------YAB1<---------AHL20(1)<---------AHL20(1) ---->AHL20(2)            <---------YAB1       --------->AHL20(2)--------->AHL20(2)<---------AHL20(2) -AHL20(2)    --------->ZAT18                --------->ICU4   --------->AHL20(1)--------->AHL20(1) >AHL20(2)    <---------ZAT18         --------->ALFIN1       --------->AHL20(2)<---------AHL20(2)   ttatattcggatatagtgcatttttagtatgaaaatgggagaggggaatttttataagtgaaaatatatatatatatatatatatatttttttgaatatg  7503500                                                                                       <xxxxxxxxxxxxx                                                                                       ------>NtERF2                 <-------TEIL                                                         <xxxxxxxxxxxxxx               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                  --------->DEAR3(1)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                  <xxxxxxxxxxxxxxxxsmallRNA(i)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                xxxxxxxxxxxxxxxx>smallRNA(s)             xxxxxxxxxxxxxxxx>smallRNA(i)                                          <xxxxxxxxxxxxxxxxsmallRNA(s)            ---------->DOF2                                                        --------->DEAR3(1)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                           --------->TOE1(2)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                             --------->TOE2(2)   --------->GLK1(2)                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->HSFB2a(1)                            --------->ANAC55(2)               --------->MYB46(3) --------->HSFC1(2)                             <---------ANAC55(2)              <xxxxxxxxxxxxxxxxsmallRNA(i) <---------HSFB2a(1)                     --------->YAB1                          xxxxxxxxxxxxxxxxxxxx <---------HSFC1(2)     <---------ICU4   --------->TOE2(3)              <-----------TGA1 xxxxxxxxxxxxsmallRNA(le3)               --------->TOE1(3)              <-----------HVH21         <-- xxxxxxxxxxxxxxxx>smallRNA(se3)    --------->ANAC46 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxx xxxxxxxxxxxxsmallRNA(si3)------>ZmHOX2a(1)     ----------->GT1    ---------->DOF2--------->DEAR3(2)   agaaggttctgaggcaaagttcgtaatccttccatgtccgaaaccataacatgtaatattagtttagttcaaagcgtcattcgaaccgacgacctctaag  7503600  Previous    Next  AGI:  At2g17230.1    Description:  phosphate-responsive 1 family protein. similar to phosphate-responsive 1 family protein [Arabidopsis thaliana] (TAIR:AT2G35150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47529.1); contains InterPro domain Phosphate-induced protein 1 conserved region (InterPro:IPR006766) Range:  from: 7501618    to: 7503098    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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