Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------ANAC58                                              --------->ANAC58                   <---------ALFIN1                                              <---------ANAC55(2)              ------>NtERF2                                              <---------ANAC58                 <---------RAP2.6(3)                                              --------->ANAC58                 --------->LBD16                                              --------->ANAC55(2)             --------->RAP2.6(2)                                             <-------TEIL                     <---------ATERF1(2)                                            --------->CCA1(2)                 --------->ATERF1(2)                                           --------->ARR14(2)                 --------->ANAC46                     ==================HOX2a_HOX2a                           <---------LBD16                     <------ZmHOX2a(1)     <---------ARR14(2)           <---------ARR14(2)               <---------At4g35610      <---------TOE1(3)               --------->ARR14(2)               <---------ZAT2           <---------TOE2(3)           <---------ZAT2               --------->ZAT2    ----------------------->TaNAC69(2) --------->ZAT2               --------->At4g35610  <----------DOF2      --------->WOX13(1)  --------->RAP2.6(3) ----        <-----------GT1         ------>ZmHOX2a(2)  <---------ANAC46 --------->At4g35610         ----- ----->YAB1--------->TOE2(3)    =================HOX2a_HOX2a        <---------At4g35610  <----------DOF2 ---->ICU4<---------YAB1 --------->GLK1(2)<------ZmHOX2a(1)     --------->ANAC46<------NtERF2  <-----   gatcagaaaattaccatagctgaggagagtctgatcgtctttgaggatacgtcccttgtaaatcaaacgctgctgatttgccggcacatcgctgttctgc  7488300                                                                                      ----------->RAV1(1)                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                 <---------LBD16                                                                                <---------DOF5.7(2)                                                                              --------->DOF5.7(2)                                                                              <-----------HVH21                                                                            <---------ANAC46                                                                       ----------->RAV1(2)                                                                       ===========================RAV                                                                       <---------At4g35610                                                        <---------ANAC58    <---------ANAC58   ------   <-----------GT1      --------->LBD16                 <---------ANAC46    <---------ANAC58  -------  --------->AHL20(2)   --------->DEAR3(1)     --------->ZAT6           --------->At4g35610--------->At4g35610 ----->LBD16           <---------ANAC46   <-----------HVH21           --------->GLK1(2) --------->MYB46(3) ---->ANAC46        <---------ALFIN1      <-----------TGA1 >>>>>>>>>>>>>>>>>LFY<-------TEIL   ------- ----LBD16         <---------ZAT14   <-------TEIL       <---------ANAC58 ----------->HVH21--------->ZAT2   gcaattaactctttgaaagactccaccgtggaatcgaggctcgtcgtcacactaaatttcgtgccattggagcatctgacgttcacggcaacagctacgc  7488400                      --------->GLK1(2)                      <-----------ARR10                      <---------ARR11(1)               ------>NtERF2             --------->ATERF1(1)            --------->ZAT2            --------->At4g35610            --------->ATERF1(1)            <---------At4g35610           <---------ATERF1(1)      --------->MYB46(3) ------>ZmHOX2a(1)           <---------RAP2.3(1)     ------>MYB46(1)     ================================HOX2a_HOX2a         --------->At4g35610     --------->AtMYB61   ------>ZmHOX2a(2)         <------NtERF2<---------ARR14(2)            <------ZmHOX2a(2)       <---------WRKY38(1)       --------->DEAR3(1)<---------ARR14(2)       <---------WRKY12   --------->At4g35610      <---------ARR11(3)     <-----------HVH21--------->ARR14(2)           --------->ARR14(2)  <---------At4g35610 ------->TEIL ------>MYB83    <---------GLK1(2)                      ---------->DOF2  --------->At4g35610<---------CCA1(2)    <---------YAB1       --------->MYB46(3)       --------->YAB1 >NtERF2 <---------At4g35610     <---------ALFIN1  --------->AGP1                     --------->GLK1(2) -->ANAC58 <---------MYB46(3)   --------->MYB46(3) --------->ARR11(3)           ------>ZmHOX2a(2) -->ANAC58<---------DEAR3(1)  --------->REM1(1)   <---------At4g35610        --------->ATHB12   cttcagcagtcagcggctgcctcgaatctgcttcaccacccattctaatttcagatcctagttcaacaaatcgcgaaattgatcggagaatcaaaagctc  7488500                                                                                            <--------                                                                       <---------ANAC58    --------->AHL20(2)                                                                    --------->GLK1(1)      <---------AHL20(1)                                                                    <---------GLK1(1)      <---------AHL20(2)                                                                   --------->ARR11(3)   --------->AHL20(2)                                  <------ZmHOX2a(1)        --------->ARR14(2)          --------->AHL20(2)                            --------->CCA1(2)              <---------ARR14(2)     ----------->GT1                           --------->ARR11(3)            <---------DEAR3(2)   ---------->DOF2     <--                           <---------ARR11(3)            <------MYB83  <---------ANAC58<---------AHL20(2)                           <---------ARR14(2)            <------MYB46(1)     <------ZmHOX2a(1)<------                           --------->ARR14(2)           <---------DEAR3(1) <---------TOE2(3)---------  --------->TOE1(2)      ----------->ARR10       --------->YAB1    <---------ARR11(3)--------->CCA1(2)   taaacctagaagaaaaaatcgtagaagaagatttgaggagactcgaagctctaataagtcggttctgaagatttcttgaggaaagggatataaattattt  7488600                                                            <---------AHL20(2)                                                           <---------AHL20(2)                                                        --------->WOX13(1)          <---------ANAC58                                                   --------->MYB46(3)               <---------ANAC58                                  ----------->GT1 --------->SPL7        --------->LBD16                              ---------->DOF2     --------->RAP2.6(3)  --------->HSFB2a(2)                             --------->AHL20(2)  --------->ARR14(2)    <---------HSFB2a(2)          -                             <---------AHL20(2)  --------->MYB52(1) --------->GLK1(2)     ----------- -AHL20(2)          --------->ZAT14             <---------SPL7  --------->YAB1  <---------ANAC58   -- -------AtMYB61     <---------At4g35610        <---------MYB52(2)   --------->ARR14(2)  *TSS       <- ---YAB1            <---------ZAT14           <------NtERF2--------->AHL20(2)   <---------ANAC58   -- >AHL20(2)          --------->At4g35610     <-----------------AGL1  <---------ARR14(2) <----------DOF2   ttggtcgaataacaaatgagactgcagaaaattaaagagttatttggccccgaacggccaattaaatgagaatccagaaatgacttgcgcttcagagaac  7488700                                   <---------DEAR3(2)                                <-----------HVH21                                <---------ARR14(2)                                --------->ARR14(2)     ------>NtERF2            <------NtERF2   <---------------------WRI1 --------->LBD16 -------->DEAR3(2)          <---------LBD16            ----------->GT1 ---------->WRI1      <------------CBF                 <------MYB46(1)               XXXXXXXXXXXXXXXX ----->TEIL          --------->ATHB12          <---------TOE2(3)           <------------CBF   <------ --------ARR14(2)   ----------->ARR10      <------------CBF       <---------LBD16 --------->At5g28300 ------->ARR14(2)   <---------YAB1--------->ETT(1)     <------MYB83  <------ZmHOX2a(1)     ------->TEIL   gtatcgacgactcttactgggtaagattgggccgggtcgggtctaaattgaggcatttggtatatagttcaggaaggaattggctgtaacttgaatctaa  7488800                                       --------->ANAC46                                       --------->ANAC58                                       --------->ANAC58                              <----------DOF2                                        <-----------RAV1(2)                         --------->KAN4(2)                                         --------->ARR14(2)                        <---------KAN4(1)                       <------MYB83       <---------ARR14(2)                        <----------TaMYB80          <----------DOF2  <-----------GT1<------ZmHOX2a(2)       <---------YAB1   <---------GLK1(1)       <-----------------AGL1  --------->TOE2(3) XXXX>MIR865-5P        --------->ARR14(2)     --------->ZAT14   <------MYB46(1)  --------->LBD16 ---YAB1  ------->TEIL <---------ARR14(2)   --------->O2        ----------->GT1<---------LBD16   ttgaagatgatgaatcaactaattggatattcctttgcaacatgccacttctctctttgggcaatttggtttaacctttgaaccggatcagaaggaacca  7488900                                                                                           --------->ANAC58                                                                                           --------->ANAC58           <-------TEIL                                                                    --------->ANAC46   <---------AHL20(2)                                      <-----------GT1           --------->CCA1(2)  <---------AHL20(2)                                    <---------REM1(1)          --------->YAB1 ---  --------->AHL20(2)             --------->YAB1         ----------->GT1         ---------->DOF2  <---  --------->AHL20(1) <----------DOF2         --------->ARR11(3)               <---------YAB1     ----   aaaatttaatgggttcaatttcactttgatgtctataaacatttacagatgttgtatgttgtaacaacttgaaataagttatcaaagataaacacccaag  7489000                                                                                                    <                   ---------->DOF2                                                            -------               --------->MYB46(2)                                                          ------>ZmHOX2a(1)               ----------->GT1                                                          <<<<<<<<<ARR2              <--------P                                                                <------ZmHOX2a(2)          <---------TOE2(3)                                                             <<<<<<<<<ARR1          <---------TOE1(3)                                                            --------->ARR14(2)   <---------TOE2(3)                                             <----------DOF2       <---------ARR11(3) ------>CCA1(2)--------->MYB52(2)                --------->MYB52(1)                    <---------ARR14(2) ------ARR11(3)<---------MYB46(3)      --------->YAB1        <---------RAP2.6(2)  --------->ZAT18   - ----->ARR11(3)--------->MYB111(1)--------->MYB46(3)        <---------LBD16  ---------->DOF2 <-------   atatataggtttaagggtagttaaagacgaagagtgaccactgataacaaataccgtattgatgcggcttttctatcaacaaagttcacgatcctatcat  7489100                              <---------YAB1                            <---------ICU4                            --------->YAB1      <---------AHL20(2)   <---------YAB1 ---------AHL20(2)      <---------ARR11(3)                                     --------->At4g35610 -->YAB1                --------->AHL20(1)                                   <-----------RAV1(2) -------->AHL20(2)    ------->TEIL                                        --------->ANAC58 --ATHB12 <---------YAB1--------->ARR11(3)       ---------->DOF2          --------->ANAC58   atataaatttttatgaattcgatgaatatatcattactgaaaaacacacattcaagctgtttattctataactgagaagccagatggagagacatcagtt  7489200  Previous    Next  AGI:  At2g17190.1    Description:  ubiquitin family protein. similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G17200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59899.1); contains InterPro domain Heat shock chaperonin-binding (InterPro:IPR006636); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain UBA-like (InterPro:IPR009060); contains InterPro domain Ubiquilin (InterPro:IPR015496); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IP Range:  from: 7484927    to: 7488688    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g17200.1    Description:  ubiquitin family protein. similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G17190.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59899.1); contains InterPro domain Heat shock chaperonin-binding (InterPro:IPR006636); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain UBA-like (InterPro:IPR009060); contains InterPro domain Ubiquilin (InterPro:IPR015496); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IP Range:  from: 7488963    to: 7492322    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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