Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <----------DOF2         --------->O2         <---------O2        ---------->ID1      --------->WRKY12                                                         --------->ANAC58      ----------->HVH21              ----------->HVH21                         --------->ANAC58    <----------DOF2               <------NtERF2                         --------->AtMYB61   ------>ZmHOX2a(1)    ------>ZmHOX2a(1)             ------>NtERF2                         --------->YAB1  --------->ARR14(2) -------HSFC1(2)         <----------DOF2         ----------->HVH21      ------->GAMYB   <---------MYB52(1) ------>HSFC1(2)   --------->ALFIN1 <---------MYB46(2)                 --------->MYB46(3)  --------->TOE2(3) --------------WRI1<-----------RAV1(1)--------->MYB52(1)     <----------DOF2   --------->ANAC46   aacatcctttgacgtctttatgtgttgctctatgtccgcctaacgcttgatgtgacccaaacactttcttacaaccatcacactcaaaccgttcctcaac  7484300                                   --------->ICU4                            ==================HOX2a_HOX2a                                   <---------YAB1                            ------>ZmHOX2a(2)                                  --------->TOE2(3)                         ===================HOX2a_HOX2a                                 --------->YAB1                             <------ZmHOX2a(2)                                 <---------ICU4                            ------->TEIL                                 <--------HAHB4                            --------->ARR14(2)                                 --------->ATHB12                          <---------ARR14(2)                 <---------bZIP60(1)                                  <---------At4g35610                 --------->bZIP60(1)                                  --------->At4g35610             <------MYB46(1)    --------->ICU4                      <-----------RAV1(2)      --------             <------MYB83       <---------ATHB12                   ================HOX2a_HOX2a      <            --------->ALFIN1    <---------YAB1<------ZmHOX2a(1)    ------>ZmHOX2a(1)    =============           <--------P    <---------MYB52(1)   =====================================HOX2a_HOX2a<------           --------->ALFIN1   <---------------AGL15                =================HOX2a_HOX2a -----   ----------->HVH21  <---------YAB1    <---------ZAT14           --------->TOE2(3)     <------ZmHOX2a(1)   ttcacttgaacgggttgggacatcaccattagccatcattagtaaacaggaggctatgttatgctcttcctcagatggatcccaactcgaggatgatgac  7484400                                                         <---------ANAC58                                                         <---------ANAC46                                                         <---------ANAC58                                                --------->TGA1a                                                --------->bZIP60(2)                                                --------->ANAC58                                                --------->ANAC46                                                --------->ANAC58                                                --------->O2                                                <---------O2                --------->O2                                           --------->bZIP60(1)       <---------bZIP60(1)                 <---------TOE2(2)      <---------MYB46(3)  <-------TEIL    <---------TGA1a                ------>ZmHOX2a(1)      <--------P------>NtERF2       --------->bZIP60(1)        <---------At4g35610            ===============================================MYC_MYB <---------ANAC46<---------TOE1(2)     ===================MYC_MYB ----------->HVH21 --->TGA1      --------->TOE1(2)      ====================MYC_MYB<-----------HVH21    --------->DAG2 ------NtERF2  --------->TOE2(2)      ================================================MYC_MYB     --- ====================HOX2a_HOX2a      <-------GAMYB     <---------TOE2(3)   <---------O2  --------->ZAT18 ---TGA2(2)   ------>ZmHOX2a(2)   <------ZmHOX2a(1)   ----------->HVH21     --------->TGA1a   <------ ---->ANAC46  ===========================HOX2a_HOX2a <---------MYB52(2)<---------At4g35610<---------ZAT18   gcagcgtttgagttgatcctacgtttgaagttagaaggagggttgatgccacgccactgacgttcagggtgacatctcatgtgtccaaagagtgccttca  7484500                                                                   <---------WRKY18(1)                                                                  ----------->HVH21                                                                 <-----------HVH21                                                                <---------ANAC58                                                                <---------AtLEC2                                                                <---------ANAC58                                                                <---------ANAC55(1)                                                                --------->ANAC55(2)                                                                <---------ANAC46                                   <---------TOE1(2)            <---------ANAC55(2)                                 <---------SPL7              <--------P                                 --------->TOE1(2)          <---------MYB52(1)                                <---------ANAC58            <-------GAMYB                          --               <---------------AGL15                   --------->ARR14(2)                          <-              ----------------->AGL1                   <---------SPL7<-----------------AGL1     >>>>> -------->HVH21--------------->AGL15                   <---------ARR14(2)           --------->HSFB2a(2) ---ZAT14   <-----------GT1     <---------ANAC58   <-----------RAV1(2)              <---------HSFB2a(2)   gtgacccgaattgtttaccacattcagtacatggtcgtgcgatttgtgaagcatcagggtccggttgcgtgaccggtttaggccttggagaagacgaaga  7484600               <------MYB46(1)               <---------MYB46(3)               <------MYB83           <-----------RAV1(1)    ------>MYB46(1)        <---------TOE1(2)    ------>MYB83       <---------------AtSPL3                                            --------->GLK1(1)  --------->DEAR3(1)   --------------->AtSPL8                                 --------->ANAC58 --------->DEAR3(2)    <---------------AtSPL8   >>>>>>>>>ARR2               <------ZmHOX2a(1) ------->ARR14(2)      --------------->AtSPL3  --------->ATHB12    <-------TEIL          <---------GLK1(1) --------ARR14(2)     <---------ZAT14         <---------YAB1   ----------->GT1--------->ANAC58 >>>>TBF1  <---------MYB46(3)           <---------TOE1(2)  <------ZmHOX2a(1)=========================   agaaccgacttcgttgttggtgagtttagtacgttttcttcttgggttttgattgtaactaggaagagttacattggaggaagcaaatgggatatcggaa  7484700                             --------->ATHB51                             --------->ATHB12                                      --------->DAG2                --------->ALFIN1                                          <------ZmHOX2a(1)                <---------ZAT6<------------CBF                           ----------->GT1    ------>ZmHOX2a(2)       <---------YAB1                        ---------->DOF2 ---------->DOF2  --------->ARR14(2)      <---------ICU4                     ------------------------>ANAC81  <---------ARR14(2)     <---------YAB1                 ----------->GT1 ----------->GT1       ------- ==========HOX2a_HOX2a   --------->ICU4              ------------------------>ANAC81        ---------   ttgggatcggagtttgaagtgttcgacattattattgagtctcttactagagagaagacagaaaaactaaaagagaggaaaaaaaaaagtagaagagtgg  7484800         <-------GAMYB        <---------MYB46(3)        ----------->GT1        <------MYB83      <--------P    <---------MYB46(3)                                                              <----------------    --------->ATHB12                                                               <-----------GT1   <---------TOE1(3)                                                             --------->GLK1(1)   <---------AtMYB61                         <---------DEAR3(2)                 <---------ARR14(2)   <---------YAB1                            <---------MYB46(3)                 --------->ARR14(2)   <---------TOE2(3)            --------->MYB52(2)                           --------->ETT(1) -->ALFIN1           >>>>>>>>>TBF1        ------------>AtMYB77            <-----------RAV1(1) >ALFIN1<------MYB46(1)       --------------------->WRI1  <---------MYB52(1)---------->ID1 <---------   gagttatggttggttaagtagaagaagaacaagttagttttcatcgacggtttcttagcagttacttctccctgttttgtcggatttacatttctttttt  7484900                                  <------------CBF                                 --------->ATHB51                                <---------YAB1                              -------->ATHB1                              <--------HAHB4                              --------->ATHB51                                 --------->YAB1                              <---------ICU4                                  <---------ATHB12                              --------->YAB1                                --------->WOX13(1)     --                             <---------ATHB12                             ------------>CBF   <-------                             --------->ICU4                             ------->GAMYB        <-------     ------>ZmHOX2a(1)       <---------ATHB51                        ---------->DOF2        --------- --------ANAC81          ------------>CBF     <----------DOF2        --------->MYB52(1)     --------- -DOF2                 <----------DOF2      <---------YAB1        --------->TOE2(3)     <---------YAB1   tgttttcctcataagttttgtttttctttcaattattattgtatttatctttgttattcgaatgaaaaacttaacgctcaatcacaaattatcaacgtca  7485000                       ----------->GT1               ----------->GT1 ------->ZAT14 <---------ANAC55(2)             --------->MYB46(3) ----TGA1 <---------AHL20(2)         --------->TOE2(3)                                         ------ ----HVH21--------->AHL20(2)        <---------ANAC55(2)                               ----------->GT1 >bZIP60(2)   <---------ICU4        ----------->GT1 <-----------------AGL1         <---------TOE1(1) >ANAC46 --------->AHL20(2) --------->CCA1(2)<-----------GT1                       <---------TOE2(1)   ctacagctatatttaataagtaaaatggagataagaaaacgtaaatgtaaccattccacatttcgaaatcaacttctacagatgtacgaggtaacaactt  7485100                                                     --------->ARR14(2)                   ------->GAMYB                --------->ALFIN1                  --------->MYB46(3)            <---------ANAC46             --------->YAB1                   --------->ALFIN1          ---------->DOF2                     <---------MYB46(3)   ---------->DOF2     <---------ARR14(2)                   --------->DAG2 ----------->GT1     --------->ARR14(2)                   <---------TOE2(3) ---------->DOF2     --------->GLK1(2)                  ---------->DOF2  <---------ANAC46     <---------YAB1    <---------GLK1(2)       ---------->DOF2  --------->ALFIN1     <------ZmHOX2a(1) --------->AGL15--------->MYB52(1)----------->GT1    <---------ARR14(2)  --------->At4g35610   caaatagaatctgaaagataacagacgacccaaagtatgtaaaaaaggttgtggggattgggtaaagaggaaagaagatgaccattgaaaacaaatagtg  7485200  Previous    Next  AGI:  At2g17180.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G35280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47516.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 7483917    to: 7484729    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g17190.1    Description:  ubiquitin family protein. similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G17200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59899.1); contains InterPro domain Heat shock chaperonin-binding (InterPro:IPR006636); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain UBA-like (InterPro:IPR009060); contains InterPro domain Ubiquilin (InterPro:IPR015496); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IP Range:  from: 7484927    to: 7488688    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version