Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->HSFB2a(2)     --------->YAB1                                                                        <---------HSFB2a(2)    <---------AHL20(2)                                                               --------------->AGL15    <---------YAB1                                          <---------AHL20(2)       <---------------AGL15 ------>YAB1                                               --------->AHL20(2)       <---------------- -->MYB46(3)  <---------AHL20(2)                         --------->YAB1             ----------------- >YAB1        --------->AHL20(2)                        <---------AHL20(2)          ----------------- ---GT1 --------->AHL20(2)       <-----------GT1     ------->TEIL                   <----------------   tcgtatattataaaatataaatttcttagaaaattttacaatttgcaaacttatgtatataataaatagtcatcaatttttaaactactatttttagaaa  7465700                                                                                 <---------YAB1                                                                                --------->TOE2(3)                                                                               --------->YAB1                                                                               --------->ATHB12                                                                               <---------ICU4   --------->YAB1                                                             <---------ATHB12   <---------ICU4                                                    --------->AHL20(1)  <---------ATHB12                                                   <---------AHL20(2)             - -AGL3                                  <---------WOX13(1)           --------->AHL20(2)<-----------RAV1(1) >AGL3                        ----------->GT1                    --------->AHL20(2)   --------->ARR11(3) >AGL2              <-----------GT1  <---------YAB1              <---------AHL20(2)--------->AHL20(2) -AGL2      ----------->GT1 ---------->DOF2                   --------->YAB1  --------->ICU4        <   acaaatcatgagatgtgttatattacagaacaaagttatatgatggacgggtttgaatcaatatttataaattttttgaaatcattaatatgttgtttca  7465800                                                                <---------YAB1                                                                --------->ICU4                                                               <---------TOE2(3)                                                              --------->MYB52(1)                                                              --------->YAB1                                               --------->ARR11(3)                                               --------->AHL20(1)                                               <---------AHL20(1)                             <------                                    <---------ZAT18           <-----------GT1             <---------AHL20(2)        <---------GLK1(2)           --------->ZAT18   <-----------GT1                  --------->AHL20(2)  ----------->GT1                <---------ANAC46 <---------AHL20(2)--------->YAB1     <---------AHL20(1) -------->ANAC55(2)         --------->YAB1     <---------ARR11(3)  <---------YAB1      --------->AHL20(1) ---------ANAC55(2)   <-----------GT1    ----------->GT1--------->ANAC55(2)      ----------->GT1 ----   atacgggttaaattctcagtttattaacaattgttatgtggacttgtgatatatttttacttaataacgattataaactaaaatagaaatattttataac  7465900            <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)   --------->AHL20(2)   <---------AHL20(2)                                               <---------AHL20(2)   <---------YAB1                                                   --------->AHL20(2)  --------->AHL20(2)                                    <---------ZAT14  --------->AHL20(1)                            <---------ANAC58   --------->YAB1  <---------AHL20(1)                            <---------ANAC58   <---------AHL20(2) --------->YAB1  <---------AHL20(2)     <---------AHL20(2)         --------->AHL20(2)            <--- -----GT1  --------->AHL20(2)           --------->AHL20(2)   <---------At4g35610               <----- ----->AHL20(2) --------->AHL20(2)--------->AHL20(2)    --------->ZAT14                <---------AHL20(2)   taaatataatttataaaattttatatatacaaattttaaaatataaattgtcttgcagtttacagctaattaaaatttagttgtgatattatatccaatt  7466000                                                           --------->ANAC58                                   ----------->HVH21       --------->ANAC46                 <-----------GT1 <---------ANAC58          --------->ANAC58         --------->ZAT14         ----------->GT1        <---------ATHB12         <---------ZAT14         <---------ANAC58     --------->WOX13(1)     <-----------GT1  --------->ANAC46          <---------ALFIN1                                 ---- --------GT1 <----------DOF2     <---------ANAC46   ------------>CBF      ----------->GT1        <--- ----ATHB12  <---------DAG2 <---------ICU4    ----------->RAV1(1)     ------------>CBF          -----   atccatataactacacttttttctccacaattagggcgtgacaaatggcaacacttcaatcaaggaacagaacacaatgtgaaaccagactgttctcatt  7466100                                                 <----------DOF2         --------->ANAC58                    <---------WRKY12         --------->ANAC58                    <---------WRKY38(1)     --------->ANAC46                       --------->WRKY18(1)    <---------HSFB2a(2)                    <-----------HVH21    --------->HSFB2a(2)      ---------->DOF2<<<<<<<<<<WRKY6 ----->AHL20(2)              *TSS          <--------ZAP1                     --------->YAB1 ------AHL20(2) --------->DAG2      ------>ZmHOX2a(1)           <---------ALFIN1     <----------DOF2 ---->AHL20(2) ---------->DOF2--------->DAG2<<<<<<<<<<WRKY11--------->PCF5   <-----------GT1    -----   tattttccagcaagtcaaaaagtcaaactcaaaaagtcctctctcggtcaactttcttcttggtccccatcttcacaaatcacaactctttttatttcca  7466200                         ------>NtERF2                        --------->DEAR3(1)                        ----------->HVH21                        <---------ETT(2)                      --------->LBD16                      <---------ATERF1(1)     ------>ZmHOX2a(1)                     --------->DEAR3(1) <---------HSFC1(2)                    --------->DEAR3(2)  <---------HSFB2a(1)                   --------->MYB52(1)   --------->HSFC1(2)         --------->TOE2(2)              --------->HSFB2a(1)--------->HSFB2a(2)                      -         --------->TOE1(2)   <---------------AGL15   <-----------------AGL1       ------>ZmHOX2a(1) -        ----------->RAV1(2) <-----------------AGL3  <-----------GT1    ---------->ARF1             -- ----->DOF2       --------->ANAC46  ----------->GT1<-----------GT1     ---------->ID1    ------>ZmHOX2a(1)   aagaccaaaaacctgagaacacaccggcgacctgaaaatggaaacttcctgttttacccttctcggtctccttgtctccctctccttcttcctcactctc  7466300                                                                         --------->ANAC58                                           --------->O2              --------->ANAC58                         --------->ZAT14   <---------ANAC58  <-------GAMYB                         <---------ZAT14   --------->TGA1a  <------MYB46(1)                        ------->GAMYB      <---------O2     <------MYB83 --------->ANAC58  --------->LBD16                      <---------At4g35610  <---------TGA1a  --------->MYB55(2)            --------->ANAC58                --------->HSFC1(2)         <---------ANAC46 <---------MYB46(3)            --------->ANAC55(2)            --------->LBD16                ==========================MYC_MYB              <---------ANAC55(2)          <---------LBD16--------->ZAT18   <---------ANAC58<---------TOE2(2) --------->ANAC58         --------->MYB52(1)  --------->ALFIN1    --------->WOX13(1)  --------->ANAC46     --------->ANAC58       ----------->HVH21=============================MYC_MYB--------->MYB52(2)  ----------->RAV1(1) -------->LBD16 <---------HSFC1(2)    --------->TOE2(3)    <---------TOE1(2) --------->ANAC46 ----->NtERF2 --------->ARR14(2)   <---------ALFIN1       <---------MYB52(1) --------->ANAC58   <---- ------->DEAR3(1)     --------->At4g35610  <---------bZIP60(2)       --------->ANAC58     <---------ANAC46   tccgcccaaatgaccggaaacttcaactgcagtggctcaacctcgacgtgtcaatctctcgttggttactcaagcaagaacgcaacaacgttgcgcaata  7466400                                                                               <---------ANAC55(2)                                                                            ------>MYB46(1)                                                                     <-------MYC3                                                                     ------->MYC3                                                                    --------->ANAC55(2)                                                                    --------->ANAC46                                                                    <---------ANAC55(2)                       --------->AtMYB61                            --------->bZIP60(1)                      --------->HSFC1(2)                            --------->ANAC58                      <---------HSFC1(2)                            --------->O2                      --------->MYB46(3)                            --------->ANAC58                      <---------HSFB2a(1)                           <---------TGA1a                      --------->HSFB2a(1)   --------->MYB52(1)      <---------O2                    <---------GLK1(2)--------->TOE1(1)              --------->TGA1a                    <---------ARR14(2)   <---------At4g35610     ----------->HVH21                    --------->ARR14(2)   --------->At4g35610    --------->AtMYB61----------->HVH21               <------NtERF2        ------>ZmHOX2a(1)          --------->ANAC46>>>>>>>>CAMTA3              <-----------HVH21     <---------LBD16            --------->bZIP60(2)  ------->TEIL              <---------RAP2.6(3)  --------->TOE1(2)         <---------ALFIN1  <---------ANAC46             --------->ATERF1(2)<---------ARR14(2)       <---------ATHB12   ------>MYB83            -             <---------ATERF1(2)--------->ARR14(2)      --------->ANAC58  --------->AtMYB61         <      <---------DAG2<---------ARR11(3)   --------->ZAT2 --------->ANAC58 --------->MYB46(3)       <--      <----------DOF2------->TEIL<------ZmHOX2a(2)      --------->ANAC46<--------------OsCBT    <---- -----ARR11(3)------>NtERF2--------->At4g35610        <---------ALFIN1----------->HVH21         -----   tccaaaccctttttgccgtcaagaacctccgctcgatcctcggagctaacaatctcccactcaacacctcacgtgaccaacgcgtgaacccgaatcaagt  7466500 <---------ANAC58                                                                                   - <---------ANAC55(2)                                                          --------->ANAC58      - --------->ANAC55(2)                                                          <----------ID1        < <---------ANAC58                                 --------->LBD16        ---------->DOF2            < -------->SPL7                             --------->HSFB2a(2)         --------->ANAC58      <------- ---------TOE1(2)                          <---------HSFB2a(2)         --------->ANAC58      <------- -------SPL7                          <---------MYB52(1)       --------->ANAC46           <----------DOF2 -----------AtSPL3               <---------ARR14(2)         --------->ARR14(2)--------->ANAC46  ----- ---------->AtSPL3               --------->ARR14(2)         <---------ARR14(2)--------->ANAC58 ------   cgtacgtgtcccaatccattgctcttgctccaatggaaccggtgtctcgaaccgggacatcgaatacaccatcaagaaagacgacatactctctttcgtc  7466600  Previous    Next  AGI:  At2g17120.1    Description:  LYM2 (LYSM DOMAIN GPI-ANCHORED PROTEIN 2 PRECURSOR). Identical to LysM domain-containing GPI-anchored protein 2 precursor [Arabidopsis Thaliana] (GB:O23006;GB:Q8L9K9); similar to LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT1G21880.2); similar to Erwinia induced protein 1 [Solanum tuberosum] (GB:AAO32065.1); contains InterPro domain Peptidoglycan-binding LysM; (InterPro:IPR002482) Range:  from: 7466129    to: 7467901    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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