Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------At5g28300                                                                       <-----------GT1                                                                      <---------YAB1                                                                    <---------ICU4                                                                   <---------YAB1                                                                   <---------MYB52(1)             <--                                                                  --------->TOE2(3)               <--                                             <----------DOF2     --------->YAB1                  ----                                <---------AHL20(2)               <---------ICU4         --------->DAG2                           ----------->GT1   <---------DAG2      ----------->GT1       ---------->DOF2                 --------->WRKY12<---------AHL20(2)        --------->TOE2(3)  <----------DOF2    ----              <---------ANAC46  --------->AHL20(2)        ----------->GT1    <---------DAG2   <------   tctaaaaaatccatcttcgtggacggagagagtattaatttgtgctacttttctcttgaaatgttaatcgttattacagcctttttgaaaaaagttgagt  7383000                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                                                      --------->GLK1(1)                                                                      <---------GLK1(1)                                                                     <---------ARR11(3)                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                     --------->ARR11(3)                                                                  <------NtERF2                                                                <---------ANAC46                                                                --------->ALFIN1                                                               <---------MYB52(1)                                                            <------NtERF2                          <---------YAB1                    --------->ATERF1(1)                     <     <---------YAB1      <---------TOE2(2)                <---------ARR14(2)                        -   --------->YAB1     --------->ANAC46                    --------->ARR14(2)                       -- ----MYB83  <---------ZAT18                              <------ZmHOX2a(1) --------->YAB1          <- ----MYB46(1)         --------->ANAC58                   ====================HOX2a_HOX2a           -- ----->MYB59--------->ZAT14  <---------WOX13(1)          =====================HOX2a_HOX2a         --- ----->MYB111(1)      --------->ANAC58              <------NtERF2<---------MYB46(3)               <-- ---ANAC46  <---------ZAT14--------->ATHB12  --------->ALFIN1<---------DEAR3(1)       <----------DOF2   aggtattgtaatagtatactttccacgtatgattgagaaaactcaaggtgaggcagagaggagccggtggggatctctcatactctctctttgtttacag  7383100         --------->YAB1        <---------YAB1                                  --------->TOE2(3)      --------->YAB1                                  <---------TOE2(3)      <---------ICU4                                 <-----------GT1     <---------ATHB12                            <--------HAHB4     --------->ICU4                              --------->YAB1                       --------->AHL20(2) ------ZmHOX2a(2)                                --------->ATHB51                    --------->AHL20(2) -------->CCA1(2)                                <---------ICU4                      <---------AHL20(2) ------->ARR11(3)                                <--------ATHB1                 <---------AHL20(2) --------ARR11(3)                               <---------ATHB51             <---------AHL20(2)  ---- ------->AGP1                      <-----------------AGL1   <-----------GT1 --------->AHL20(2)   <--- ------>GLK1(1)                 <---------YAB1  --------->ICU4           ----------->GT1  <---------- -------GLK1(1)             <---------GLK1(2)   <---------ATHB12  <----------DOF2--------->AHL20(2)   agatccaattatcatatcgagccatgaactgattctgattcgatttggcaataattaacatttatcgtctttaaacgattaaataatataaattacattt  7383200                                                    <-----------HVH21<-----------GT1                                               <---------YAB1       <---------YAB1             --------->AtLEC2                --------->YAB1      --------->AHL20(1)    ---------->DOF2                          --------->AHL20(2)  <---------AHL20(1) ----->AHL20(2)   --------->MYB46(3)        --------->ICU4       <---------AHL20(2) ------AHL20(2) ------->TEIL                <---------YAB1       --------->AHL20(2) -GT1   <------ZmHOX2a(1)               <---------MYB59    --------->YAB1    ----------->GT1    -----   taaatgaaaaggaccatgcatccaccaaggtgatactgactgcctaattataaatgtcatatcaaaatttattactatatggtttaacaaaaattcttat  7383300                                                                      <-------MYC4                                                                      ------->PIF5                                                                      ------->MYC4                                                                      <-------PIF5                                                                      <-------PIF4                                                                      ------->PIF4                                                                      <-------MYC3                                                                      ------->MYC3                                                                      ------->MYC2                                                                      <-------MYC2                                                                     --------->TGA1a                                                                     <---------O2                                                       --------->CCA1(2)                                                      <---------AHL20(2)   <---------GLK1(1)                                                      --------->AHL20(1)  <---------ARR14(2)                                                 --------->AHL20(2)  --------->O2                                                 <---------AHL20(2)  <---------TGA1a                                              --------->ARR11(3)    <---------TOE1(2)                                           <---------TOE2(3)  --------->KAN4(2)                                          =====================================bZIP_DOF --------->GLK1(1)                                          ---------->DOF2     --------->ARR14(2)        --------->CCA1(2)                                         --------->AHL20(2)   <---------ARR14(2)       <---------ARR11(3)                                     <---------YAB1   <---------AHL20(1)  <---------ARR11(3)                                     <---------------AGL15   <---------KAN4(1)         --------->ARR11(1)           <----------DOF2           --------------->AGL15   --------->KAN4(1)         --------->ARR11(3)         ---------->ID1             ----------------->AGL3   <----------TaMYB80        <---------ARR14(2)        <-----------GT1      ==================================================bZIP_DOF--------->ARR14(2)    <---------AHL20(2)       <----------DOF2  <---------ARR11(3)    ------------>OsbHLH66 ---->At4g35610     --------->At4g35610  <---------AHL20(2) ------->TEIL  --------->ARR14(2)   ctgaattttttttctttttcttatctgaatgctttcattctaattaaagattttaatatatgaatattcgcacgtggatatttgtataagatatgcatta  7383400                                                                                         ------>MYB83                                                                                         -------->P                                                                                         ------>MYB46(1)                                                                                         --------->MYB52(1)                                                                                        --------->MYB55(1)                                                                                       <---------MYB111(1)                                                       --------->ALFIN1      --------->At4g35610                               *TSS                  --------->CCA1(2)       <---------ZAT2   -------                       --------->GLK1(2)      <------ZmHOX2a(1)              <---------At4g35610 <---   --------->LBD16    <---------GLK1(2)  <------ZmHOX2a(1)                   --------->ZAT2   -------   atctccgaggctatgtatagttcagaatttgaagtgaagtttaggagaggaagagagatggaggtatttagacttggagagctgagacacctactggtga  7383500                                                              ------>NtERF2                                                            --------->ATERF1(1)                                                   ----------->HVH21                                                   --------->TGA2(2)                                                  <-----------HVH21                                                  <-----------TGA1                                                 --------->TGA2(1)                                                 <---------TGA1a                                                 <---------TGA2(1)                                                 --------->TGA1a                                                 --------->bZIP60(1)                                                 <---------O2 --------->LBD16                                                 --------->ANAC58                                                 <---------bZIP60(2)                                                 --------->bZIP60(2)                                                 <---------bZIP60(1)                                                 --------->O2--------->DEAR3(1)                                                 --------->ANAC55(2)                   --------->DEAR3(1)            --------->ANAC58          ------>NtERF2              --------->ATERF1(1)                --------->ANAC46         --------->LBD16         --------->ETT(1)                       ----------->STF1          ------>NtERF2       <-----------HVH21 <---------ANAC55(2)    <-----------STF1         --------->DEAR3(1)      <-----------RAV1(1)<-----------------AGL1<---------TGA2(2)        <---------LBD16    <---------ANAC58  --------->ARR14(2)      ----------->TGA1<---------LBD16    <---------ANAC58  <---------ARR14(2)  <---------YAB1  <---------ARR14(2) ---->TGA1    <---------ANAC58          --------->YAB1    --------->ARR14(2) ------ANAC46 <---------ANAC58  --------->DAG2----------->HVH21   <---------MYB52(1)          <------ ---->HVH21<------NtERF2 --------->ANAC55(2) <---------WOX13(1)<------NtERF2          <-------TEIL   cggttttcttgtcggggctcgccgaatacttgataaggccagtgatgactgacgtcaccgtagccgcggtttgctccggcctagacgattcatgttcttt  7383600                                    <---------ARR14(2)                                    --------->ARR14(2)                                    <-----------ARR10                    --------------->AGL15                            <---------AHL20(2)             --------->LBD16        <---------ARR11(3)        <-------TEIL<---------AHL20(2)        ----------->HVH21           <---------ARR11(1)       --------->AtLEC2    <---------MYB52(1)    <---------CCA1(2)              <---------CCA1(2)      <-------TEIL   --------->AHL20(2) <---------RAP2.6(3)<---------------AGL15      --------->AHL20(2)   --------->YAB1              <---- ----DOF2  <---------LBD16 ----------->GT1     <---------AHL20(2) --------->AHL20(2)       <---------   ggccgtctatctcaccggagtacaacaagtggtaaccatatctacttatatatatacacatacatgcatataatattaaatctgttattgtttttacgct  7383700                       --------->ICU4                       <---------YAB1                     <-------GAMYB                    --------->ALFIN1                  <------MYB83                  <---------ANAC46                  <---------ANAC58                  <------MYB46(1)                  <---------ANAC58                 <---------MYB46(3)                                                         ---------                 --------->MYB55(2)         <-----------GT1                              <------ZmHOX2a(1)                <---------MYB55(1)         <-----------GT1 ----------->GT1              <------MYB46(1)               <---------MYB52(1)      <----------DOF2 ----------->HVH21                <------MYB83 ------DOF2   <-------GAMYB         <-----------GT1  <---------At4g35610              <--------P --GT1   <----------DOF2        <----------DOF2<----------DOF2                ---------->DOF2   ttaactaatctcttttcgttgggtgttgattactctttaaactttttatctttttatctgatggtgaaaatgatataaaaaaaagacggtaggaatgggg  7383800                                                  --------->ANAC58                                       --------->CCA1(2)                    ------>ZmHOX2a(2) --------->ARR14(2)          <---------bZIP60(1)         --------->ARR11(3)                                          <--        <---------ICU4                --------->ARR11(1)                                        <----        -------->HAHB4                <---------ARR14(2)                 ------->TEIL          <-----       <---------ATHB12         ----------->HVH21 --------->ANAC46     ------->MYC3           <------       --------->ICU4        --------->MYB52(1)   --------->ANAC58     ------->MYC2         ---------  --------->YAB1----------->HVH21   ----------->ARR10                  <-------MYC3        <--------- >ALFIN1--------->YAB1  --------->WOX13(1)      ---------->DOF2        <-------MYC2      ------>ZmHOX2a(1)   acaatggtaatgatgccagtgatcggcaatctatcggacagatatggaatcaaagcaatgctcactcttcccatgtgcctctctgttcttcctccaggtt  7383900  Previous    Next  AGI:  At2g16980.1    Description:  tetracycline transporter. similar to tetracycline transporter [Arabidopsis thaliana] (TAIR:AT2G16990.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16990.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61976.1); contains InterPro domain Tetracycline resistance protein, TetA; (InterPro:IPR001958); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 7383431    to: 7388185    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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