Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------------->AGL15                                                                   --------->TOE2(3)                                                                  --------->ZAT6                                                    <---------GLK1(2)        <---------------AGL15                                          <---------TOE2(3)      <---------TOE2(3)                                       <---------YAB1         --------->AHL20(2)                                    <---------AHL20(1)        <---------AHL20(2)                                    <---------AHL20(2)    --------->AHL20(2)----------------->AGL2                                    --------->AHL20(2)    <---------AHL20(2)<-----------------AGL1                    <----------DOF2 --------->AHL20(1)----------->GT1       ----------------->AGL1             <---------ZAT6   <-----------GT1   ---------->DOF2 <-----------GT1     ----------->GT1   tttcatgttattttggtgttagctttacattttttcaatttattaatgcttaaagattgtttaatttaacattagtagaccaaaattggttaactggcct  7371400                         <---------GLK1(2)                       --------->LBD16                      --------->HSFB2a(2)                      <---------HSFB2a(2)                     <---------LBD16                   ------>ZmHOX2a(2)                                                    ----------->GT1                 --------->ARR11(3)                                                     <---------ANAC55(2)                 <---------ARR11(3)                               <---------ATHB12 --------->REM1(1)             <-------GAMYB               --------->ANAC46 --------->DAG2   --------->ARR11(3)             <---------At4g35610   <---------ANAC46      ---------->DOF2   <---------ARR11(3)    ----   tattttgtctatttcagttgatctccagaatttcatggcatataaggcatatgtcttaaaaaagctcaatgaagaagtatctcttacatcatgtaaattt  7371500                                                       ----------->GT1                                                     <---------ANAC46                                                     <---------ANAC58                                                     <---------ANAC58                                               <-----------GT1                                           <---------AHL20(2)                         <---------MYB52(1)--------->AHL20(2)                 <---------MYB52(1)       <---------AHL20(2)     <---------ANAC58                <-------GAMYB             --------->AHL20(2)     <---------ANAC58<---------ANAC58               <-----------RAV1(1)    --------->YAB1<---------STY1(2)            <---------ANAC58          <------------------------ANAC81 <---------AHL20(1) <------------CBF<------------CBF ----->MYB59<-----------GT1       <---------AHL20(2)--------->STY1(2)   --------->ZAT14          <---   tggtaaatgatttttttctgttgttctgttttttttttaatcaaattattttctagcttgtaaaattgcttaactatactattgtttgccaggcctgcat  7371600                                              ----------->RAV1(2)                                             ------>NtERF2                                            --------->O2                       <------ZmHOX2a(1)    ========================================bZIP_DOF                   ===================================bZIP_DOF                   --------->MYB52(1)       <---------ALFIN1                   ---------->DOF2          --------->ANAC58          <---------ZAT2                    --------->ANAC46          --------->At4g35610               --------->TGA1a          ----------->RAV1(2)             <---------ALFIN1          --------->ZAT2    ---------->DOF2 --------->ANAC58          <---------At4g35610        <------------CBF  ----------->GT1        <-----------RAV1(2) ==========================bZIP_DOF --------->YAB1                  <----- ---------CBF    --------->MYB46(3) --------->ATHB12  <---------HSFB2a(2)<----------DOF2 <---------AHL20(2)   attgtgatgctcagctggaaccaaaggacttaaaggagttattgccacgcctgattccagtaaaatgatacttctctttttcttctactattttttgggc  7371700                              <------MYB46(1)                              <------MYB83                                 ----------->TGA1                        <---------AHL20(2)                       <---------ANAC58                       --------->AHL20(2)                   --------->CCA1(2)                    --------->YAB1             <---------REM1(1) <---------ANAC58                   <---------YAB1       --------->ATHB12   --------->ARR11(3)                  <---------AHL20(2)   --------->AHL20(2)  --------->ARR14(2)   <---------HSFB2a(2) <---------AHL20(1)      <-----------RAV1(1)       <---------At4g35610  <------   --------->HSFB2a(2) <---------AHL20(2)     --------->ARR11(3) <---------ANAC46           <-------- ----ZAT18        --------->AHL20(2)   --------->ICU4      <---------ARR14(2)            <----------DOF2   acattctagtagtttgacattttaataaaatttggtttggatttattagatgttgctctcagatatggcttatgaagatgacgatgagacacttttgaat  7371800                                                                  <---------GLK1(2)                                                            --------->ANAC46                                                            --------->ANAC58                                                            --------->ANAC58                                                           --------->SPL7                                                         --------->TOE1(2)                      -----                                                         --------->TOE2(2)                ------->TEIL                        <---------ANAC55(2)             <---------ANAC58             <-------GAMYB                        --------->ANAC55(2)             <---------ANAC58            <---------MYB46(3)     <XXXXXXXXXXXXXXXXXXXXMIR399B/C              <---------AHL20(2)                 ----------->GT1  ----------->GT1     <-----------GT1     <-----------GT1<---------SPL7           <------ZmHOX2a(1) ---AtLEC2    <----------DOF2         <----------DOF2  <---------------AtSPL3     =================== -YAB1    <-----------GT1        ---------->ID1  --------->AHL20(2)            <-----------RAV1(2)   gaagaggtttattttcctttggtattacatgttttgtcatcttttttcaaattatataacgtacgaaagaatttcatttatgcaggaggttgaatctcaa  7371900                       <---------MYB46(3)                     <---------ANAC46             <---------REM1(1)             <---------YAB1             --------->ALFIN1            -------->ATHB1           --------->At4g35610           --------->YAB1                         <-----------GT1         <-----------RAV1(2)             <---------ICU4                        <---------AHL20(2)        <------ZmHOX2a(2)               <---------ATHB51                       --------->AHL20(2) --->P <-----------HVH21                --------->ICU4<-----------GT1    <---------DAG2       ------- ==============HOX2a_HOX2a              <---------ATHB12 <----------DOF2 <----------DOF2     <-------   ccagacatcgatcaggtgtagttgtttgttcttgtgacttcaattattcttacaaattacttttattcacattaacttttttttaatattcttatatgat  7372000                                                                                            <--------                                                                                      <---------TOE2(3)                                                                                <---------AHL20(1)                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                 --------->YAB1                                                 --------->AHL20(1)             <---------------AGL15                                              <---------ARR11(3)             --------------->AGL15                    --------->YAB1            --------->ARR11(3)  --------->ARR11(3)                                 <---------YAB1            --------->AHL20(2)<--- <---------GLK1(1)     <-----------HVH21--------->ANAC58                   --------->AHL20(2) ------- -->ATHB12  <-----------------AGL3      --------->ANAC58                   <---------AHL20(2)<-------TEIL --YAB1     ----------------->AGL3      --------->ANAC46            <-----------GT1   <---------ANAC55(2)   ttgaaatctcgttttccattaatagggtcatttgatatatgcacacaagttgtatatgatagtctgagttatacaatataaatatattaagtatatacat  7372100                                                                   <---------AHL20(2)                                                                   --------->ATHB12                                                                  <---------AHL20(2)     <---------ICU4                <------ZmHOX2a(1)              --------->AHL20(2)  --------->TOE2(3)          --------->YAB1                       <---------AHL20(1)           <----- ---GT1                --------->ANAC58                           --------->AHL20(1)           ------ ------ICU4            --------->ANAC58                    <---------ZAT18              ------->TEIL -->ANAC46    --------->ZAT6<---------YAB1                 --------->ZAT14          <---------TOE2(3)   catttcttaatgactatctctaggcacaaaatgataaggagtggaatttaagagcatgcagtgcaaaatttattggtattctcgctaatgtatttggaga  7372200                                                                                                    -                                                                                                    -                                                                                                    -                                      <---------AHL20(2)                                           --                                    <---------ICU4                                                <--                                   --------->ICU4                                                ----                              ----------->GT1                                                    ----                             <---------TOE2(3)                                                <------                       <---------YAB1 <---------YAB1                                          <------           --------->ZAT6    <---------TOE1(3)                                                ------- ----At4g35610         <---------------AGL15                                                  ------- --->At4g35610         --------------->AGL15                             --------->At4g35610 --------   tgaaattcttctaacactcatgcctcttattgaggtaaatattatttctctcggtctatggaacttaaaacaattagctaagaacatgttcttccaagct  7372300  Previous    Next  AGI:  At2g16960.1    Description:  importin beta-2 subunit family protein. similar to protein transporter [Arabidopsis thaliana] (TAIR:AT2G16950.1); similar to protein transporter [Arabidopsis thaliana] (TAIR:AT2G16950.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47424.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 7371765    to: 7376045    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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