Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------AHL20(2)                                          --------->AHL20(2)                                       <---------AHL20(2)                                      --------->AHL20(2)                                      <---------AHL20(2)     <---------AHL20(2)              <---------YAB1    <---------AHL20(2)            --------->AHL20(2)    <---------AHL20(1)            <---------AHL20(2)    --------->AHL20(2)            <---------YAB1 -------->AHL20(2)             --------->AHL20(2) ---------AHL20(2)             <---------AHL20(1) ---------YAB1                 --------->AHL20(1) ------->AHL20(1)              <---------AHL20(2)                     --------->TOE1(2) ------->AHL20(2)              <---------ARR11(3)          <------ZmHOX2a(2)                      <-- --------AHL20(1)              --------->ARR11(3)         --------->ARR14(2)           <---------AHL20(2) >AGL15        ----------->GT1--------->AHL20(2)          <---------ARR14(2)------->TEIL      <------ -AGL15      ---------->DOF2--------->AHL20(2)    <---------ICU4    ------->TEIL       --------->AHL20(2)   atataattaatttttaaaagttataaacaaaaatatattattaattttttaaaaatgaccgatccaaatgaacatatgaattttagtatataaattgtgt  7360500                                     --------->ANAC58                                     --------->ANAC46                            --------->ANAC55(2)                            --------->YAB1                <---------YAB1       --------->ANAC58  --------->ANAC58       <---------ARR14(2)  --------->ANAC46       --------->ARR14(2)  --------->ANAC58       <---------GLK1(2)--------->GLK1(2) ---------GT1 --------->YAB1<---------ANAC55(2)   --------->TOE2(3)                                <- ---ANAC46 <----------DOF2 <-------TEIL<---------ARR11(3)      --------->ZAT6     <---------AHL20(2)<   ttacaagccaatgctttgataattctagattcgtaatccaagaaattctatttcttaaaacataaactctacaaaaaaacatattttttttatgggacaa  7360600                                                                               <-----------GT1                                                                             <-----------GT1                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                          <---------ICU4                                                                          --------->AHL20(1)                                                                          <---------AHL20(1)                                                                        <---------TOE2(3)          --                                               ------>ZmHOX2a(1)      <---------AHL20(2)           <-                                   <---------AHL20(1)                 --------->AHL20(2)        -----             <-----------GT1       --------->AHL20(1)             --------->AHL20(2)        ---------       --------->YAB1              <---------AHL20(2)             <---------AHL20(2)        --------- ----------RAV1(2)                 --------->AHL20(2)           --------->TOE2(3)       <-----------GT1 ---------TOE2(2)                 --------->AHL20(2)         ----------->RAV1(1)      <---------AHL20(2)   ctcaggttttcatattaactacatttatagactaaattttatttttctcctatattctttggacaacattaattaatattttctctattttttcaagcta  7360700                                                                                              <------ <---------WOX13(1)                                                                     --------->MYB52(1) ------->ATHB12                                              <---------YAB1             <-----------GT1 --------MYB46(3)                                          <-----------GT1         <---------AHL20(2) ---->MYB52(1)            <----------ID1   <---------------AGL15                   --------->AHL20(2) >ANAC58                 <------ZmHOX2a(1) ========================================================== >ANAC58    ---------->DOF2             <-----------GT1 ----------->GT1         <----------DOF2   ---   atggttgacaaaaaaaaagaatatttaggagacaaatgaaatttacaaaaacaagaagaagttactattttgcaaactctctcttttaattaacagcttt  7360800                                                                      ------>MYB83                                                                      ------>MYB46(1)                                                                    <---------MYB59       ----------->GT1                                             --------->ANAC46  --------->AHL20(2)      --------------->AGL15             ----------->RAV1(1)   <---------CCA1(2) ----DOF2>>>>>>>>>GATA-1  <---------------AGL15             ------>MYB46(1)     <---------ANAC58 =========================================MADS_MADS         ------>MYB83        <---------ANAC58 ------->DOF2        ---------->DOF2                     --------->ANAC46       <---------ANAC46   <<   aaaagaaaatagataaactcataaaaagcccataagagaaaacttgaacagaacaaaaaacccaacaaaacccaacttagtagcgtctctccattctctt  7360900                                                                                             <-------                                                                                            ---------                                                                                     --------->O2                                                                                     ================                                                                                     <---------O2          <---------SPL7                                                        ----------->HVH21  <-        --------->ATERF1(1)  <---------DAG2                           =========================bZIP_DOF        <------NtERF2        *TSS        <---------ANAC58             <----------DOF2<---------TGA1a<      <---------DEAR3(1)     <----------DOF2                      <---------GLK1(2)  --------->TGA1a< <<<<<<<TBF1       <----------DOF2       <---------ANAC58      --------->YAB1  <-----------HVH21<----   cttcttcgtcgtcgtccctgtcttttccaaacttttttgctgtgcgtttttttttgtccaaagaatcatattcttttgccctctcacacgagtcatattt  7361000                                 <---------AtMYB61                                 --------->ALFIN1                                <-------GAMYB                             <---------ABI4(1)                            <---------RAP2.3(1)                            <---------ERF1                            <---------RRTF1(1)                            ------>NtERF2                           <---------RAP2.3(2)                           <---------DEAR3(1)                           --------->O2                          --------->ATERF1(1)                          <------NtERF2                         <---------ATERF1(1)                         ------>NtERF2                        <---------DEAR3(1)                        ----------->HVH21                        --------->DEAR3(1)                       --------->RAP2.3(1)                       --------->ATERF1(1)                       <------NtERF2                      ------>NtERF2                      <---------ATERF1(1)                      <---------ORA47(2)                      <---------RAP2.3(1)                      <---------ERF1                      <---------RRTF1(1)                      <---------DEAR4(2)                     <---------DEAR3(1)                     <---------RAP2.3(3)                     <---------RAP2.3(2)                     <---------RAP2.6(2)                     --------->ATERF1(2)                                         <---------HSFB2a(2)                     <---------ANAC46                                            --------->HSFC1(1)                     <---------ATERF1(2)                                         <---------HSFC1(1)                     <---------DREB2C(2)                                         --------->HSFB2a(2)                     <---------RRTF1(3)                               ===============================                     <---------RRTF1(2)                               ------>ZmHOX2a(2)                <---------ICU4<---------DREB2C(2)                    <------ZmHOX2a(2)                <------------ATHB5<---------MYB46(3)                --------->ARR14(2)              - --ICU4         --------->YAB1--------->ALFIN1                      --------->ARR11(3)          <---- >ICU4       --------->YAB1<---------O2        --------->LBD16      <---------ARR11(3)       <------- ==========bZIP_DOF --------->RAP2.6(3)        --------->ANAC46     <---------ARR14(2)       -------- --------DAG2--------->WOX13(1) <------NtERF2------->GAMYB          --------->AGP1          <-------- ----------DOF2<---------ATHB12<---------MYB46(3)                  --------->GLK1(1)   ----------->RAV1(1) ---------DAG2 --------->ICU4<------NtERF2 -------->P              <---------GLK1(1)   --------->MYB52(1) -------GT1 --------->MYB46(3)<---------DEAR3(1)                  ----------->ARR10   --------->MYB46(3)   acctttttgccacaacaatcatggcggcgacggcggtggtctggcaaccccgagacgatggtctcgctgagatctgttctcttctcgaacaacagatttc  7361100                 --------->ANAC58            ----------->HVH21       <-----------HVH21       --------->LBD16                  --------->REM1(1)    ------>ZmHOX2a(1)    <---------GLK1(2)     --------->ZAT14 ======HOX2a_HOX2a       <---------ARR14(2)--------->ZAT6 ----->ZmHOX2a(1)--------->ANAC58   --------->ZAT2 -------GT1 --------->WRKY38(1)     --------->At4g35610 --GLK1(1)  --------->WRKY12        <---------At4g35610              --------->MYB46(3)           <-- ->GLK1(1)<-------GAMYB  --------->ARR14(2)<---------ALFIN1    --------->GLK1(1)                 <--- -GLK1(2)<---------MYB46(3)      <---------At4g35610        ------>ZmHOX2a(1)            ------>ZmHOX2a(1)   tccttcctccgtcgttgacaagtctcagatttggaagcagcttcaacacttctctcagtttcctgatttcaacaactatctcgtcttcatcctcgttcgc  7361200                                                 <-----------GT1             <---------DAG2                  <---------AHL20(2)       --------->HSFB2a(2)                 <---------CCA1(1)       <---------HSFB2a(2)                 <---------RVE1(1)                                   <-----    <---------ARR14(2)                    <---------ARR11(3)                                  <------ <---------TOE2(3)                        --------->ARR11(3)                                  ------>ZmHOX2a(2) <---------TOE1(3)   --------->ZAT14  --------->LBD16                                        <------ZmHOX2a(2) --------CDC5<----------DOF2          ------>ZmHOX2a(1)   --------->LBD16                   <-------- ------At4g35610 <-----------GT1    ----------->RAV1(2) <---------LBD16                     ---------   gctgaggttttggaacttttctctactctctcttcgcttcctgagattttttttcttctccgtattgactcaatctatttgtcgaatgagttcggatcgt  7361300                   <---------ARR14(2)                   --------->ARR14(2)                                      --------->GLK1(2)                   <---------GLK1(2)                                      --------->ARR14(2)       <---------MYB52(1)             <----------DOF2                     <---------ARR14(2)     <---------ANAC58           <---------ANAC58                          --------->ARR11(3)     <---------ANAC58    <----------DOF2 --------->MYB52(2)             <---------YAB1 --GAMYB      --------->MYB52(1)<---------ANAC46                        ----------->ARR10 ---MYB46(3)<----------DOF2     <---------ANAC58                    <---------ANAC58            <---- -ARR14(2) <---------ANAC58  ---------->ID1      --------->TOE2(2)  <---------ANAC58<----------DOF2 >ARR14(2) <---------ANAC58<-----------RAV1(1) ------->TEIL<----------DOF2<---------GLK1(2)     <----   tgaattttcgtttgcttatcggattctctttgttgcttagctttagttgaatctacgtttcctttgaattgcttaagattctcagactttagaacattgc  7361400  Previous    Next  AGI:  At2g16950.1    Description:  protein transporter. similar to importin beta-2 subunit family protein [Arabidopsis thaliana] (TAIR:AT2G16960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61967.1); similar to hypothetical protein OsI_017396 [Oryza sativa (indica cultivar-group)] (GB:EAY96163.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47424.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) Range:  from: 7360929    to: 7368284    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version