Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->GLK1(2)                                                                     ------>MYB83                  <-                                                                     ------>MYB46(1)              <--           --------->MYB52(1)                          --------->AHL20(2)     ---------->DOF2     <--      <---------ARR11(3)                        --------->ARR14(2) --------->TOE2(3)             ----      --------->ARR11(3)--------->YAB1          <---------ARR14(2) <---------MYB59              <---- ---->AtLEC2           <---------ATHB12    --------->AtLEC2     <-----------GT1             <------ZmHOX2a(1)   gcaaacaagaacttaactggattcaatgaaaatttccctaatttgatgcaaattcacttaaatattaaacctaatctgttcaaagcctaaaacaggaggt  7313400                                                                                --------->ARR11(3)                                                                                <---------GLK1(2)                                                                           --------->TOE1(2)                                                                          --------->ANAC58                                                                          --------->ANAC55(1)                                                                          --------->ANAC55(2)                                                                          <---------ANAC55(2)                                               <---------ANAC46           --------->ANAC58 -----ZmHOX2a(1)                            --------->GLK1(2)            <-------TEIL ----MYB83       --------->bZIP60(1)       --------->ARR14(2)      <<<<<<<<<MYB98             ------- ----MYB46(1)    <---------bZIP60(1)       <---------GLK1(2)      --------->TOE2(3)           ------- ----->MYB59--------->YAB1                 <---------ARR14(2)    ----------->GT1<---------ARR11(3) << ----P     <-------TEIL                 --------->HSFB2a(2) --------->ZAT6--------->ANAC46    -------   aggaaattgtagattcatgacctcataaatcggaatcaatttcgagattctgtgtatttgaaacactatgttaaatacgtaagatttttcccaaaaccta  7313500                                                       --------->ATHB12                                                    --------->MYB52(1) -->TOE2(3) --------->ANAC58                        ------>MYB83                                   -- -->TOE1(2) ----------->GT1                         ------>MYB46(1)                                -- <<<<<<<<<<<<<<<LFY --------->YAB1<<<<<<<<<MYB2   --------->AtMYB61       --------->GLK1(2)        -- -->TOE2(2) --------->ANAC58 <----------DOF2    ------------------------>ANAC81                  <---   agaacaatggaaacaagtaaaatcatcttctctttggttttctattcaaaaaccaaacgattgaaatcgaagaaacaatctatagaatagagagaagaaa  7313600                                                                  <---------HSFB2a(2)           <----                                                                  --------->HSFB2a(2)      --------->SPL7                                                                 <---------TOE2(1)        ------>NtERF2                                                                 <---------TOE1(1)       --------->DEAR3(1)                                                             --------->ANAC58            <---------SPL7                                                             --------->ANAC58            --------->LBD16                                                          --------->LBD16              <---------LBD16                                                         --------->ANAC58         --------->ARR11(3)                                                         --------->ANAC58         <---------ARR11(3)                               --------->TOE1(2)         --------->ANAC46        <---------GLK1(1)                               --------->TOE2(2)        <---------LBD16          <---------RVE1(1)                             -------->P               --------->GLK1(2)          --------->GLK1(1)                             ------>MYB46(1)          --------->ARR14(2)        <---------ARR11(3) <- ------->ANAC58              ------>MYB83             <---------ARR14(2)        --------->ARR11(3) -- ------->ANAC46            --------->AtMYB61         --------->GLK1(1)          --------->ARR14(2)<-- ------->ANAC58           --------->MYB46(3)         <---------GLK1(1)          <---------ARR14(2)--- ------ALFIN1     --------->YAB1   --------->REM1(2)<------ZmHOX2a(1)      ----------->RAV1(1)  -----   cactccaaactgaaatcgaatcaaaaaaaccaacctgtgaagaaacaattcggaggaatccgcaagtacgagaagaacaccagatatctcgcggacgata  7313700                                                             <---------YAB1                                                           <---------ICU4                                                          --------->AHL20(2)                                                        --------->TOE2(3)                                                      <---------ARR11(3)                                                      --------->ARR11(3)         <-----------GT1                              --------->ICU4   <---------AHL20(2)                                 --------->AHL20(1) -----ICU4                                  --------->ARR11(3)--------->AHL20(2) --------ICU4                               <---------AHL20(1)-------->HAHB4 ------->ATHB12       --------->ZAT14       --------->AHL20(1)--------->YAB1                  ------- -------YAB1   --------->At4g35610       --------->AHL20(2)--------->YAB1             <---------ANAC58 ------>ICU4   <---------At4g35610   ----------->GT1  <---------AHL20(1)              <---------ANAC58 ---->YAB1 <-----------GT1          <------ZmHOX2a(1)*TSS <---------AHL20(2)  <---------AHL20(2)   atgattttttttttctccgctcagtggagaagaatagaggagaaaaaatattggaaaatattaattatagatgggcctcttaaatttgacttgggccaac  7313800         <------ZmHOX2a(1)       <---------TOE2(3)       <---------TOE1(3) <---------AHL20(2)                                --------->AHL20(2) --------->AHL20(2)                   <---------TOE2(3) --------->AHL20(1)                   <---------TOE1(3)                         <---------AHL20(2) ---->RAV1(1)                 <--------P<------ZmHOX2a(1)          <---------ZAT14                  -   aaattttttaaggaatttgacatttgtttttggtaagtttaaggaatttgacattaattctagccagagtatacaatttgatttttttttaagagaaaac  7313900                                                                        <---------AHL20(1)                                                                        --------->AHL20(1)                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                        --------->ARR11(3)                                                                        <---------ARR11(3)                                                                       --------->AHL20(2)                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                       <---------AHL20(2)--------->AHL20(2)         <---------AHL20(2)           --------->AHL20(2)--------->ARR11(3)      ----------->GT1         <-----------GT1           <---------AHL20(1)    ---------->DOF2         <---------AHL20(2)          <---------ARR11(3)                  --------- -------->YAB1       XXXXXXXXXXXXXXXXXXXX>MIR426        --------->AHL20(1)                  <--------   aattttaaaagttaattttgtttttggaaatttatcttcataaaatttttcatatgaaaatatttatttgaaaatatatttcgctcttgttgaataattt  7314000                                     --------->YAB1                                       <---------AHL20(2)                           ----------->GT1   <------ZmHOX2a(1)                           <---------AHL20(2) >ATHB51         <---------ZAT6 --------->ICU4                                   ---------->DOF2 -ICU4           ----------->GT1<---------YAB1 ----------->GT1      <---------YAB1 ----------->GT1   caaaatgtttttcttactagagttacaaaatgttataattcataacaggaagaaaaaattcaaaaatttcatgtttgcataagtaaagttatttattgta  7314100                              --------->ICU4                              <---------AHL20(2)                              --------->AHL20(2)                         <----------ID1                         ----------->GT1                        ----------->GT1                       ----------->GT1                                                              <            --------------->AGL15           --------->AHL20(2)                                     --            <---------------AGL15           <---------AHL20(2)                              ---------           ----------------->AGL2       --------->ICU4                <----------DOF2   --------->ANAC58           <-----------------AGL3     --------->TOE2(3)    <---------HSFB2a(2)          <---------ANAC55(2)           <-----------------AGL2    <---------ZAT6        --------->HSFB2a(2)          --------->ANAC58   tgtagtattggtatctctatatggaaggggaaaaaattagtcttaattaatatgaattcttgtagaaaatgcctttttttaaaaattgttacgaaaatgc  7314200                                                               ------>MYB83                                                             <---------MYB59                                                          <-----------GT1                                                       <---------AHL20(2)                                                    ------->TEIL                                                 --------->ANAC55(2)                                                 <---------ANAC55(2)                                                 <---------ANAC55(1)                         ------>MYB46(1)                --------->AHL20(2)               <---------ANAC58                          --------->DEAR3(1)   <-----------GT1        ---------->ID1         <---------ANAC46                         --------->DEAR3(2) ---------ICU4  --------->YAB1                  <---------TOE2(3)                 <---------AHL20(2) ------->ICU4--------->WOX13(1)                <-----------GT1 ------>MYB46(1)   --------->AHL20(2) ->DOF2    <---------ATHB12    --------->AHL20(2)<---------ANAC58              --------->YAB1------>MYB83   catttttacttaaatcaattaaaaatttgtcattttaaaacttagaaatttacgtattttataccaaatactaaaaccgaataataaatagaaccgacta  7314300  Previous    Next  AGI:  At2g16860.1    Description:  GCIP-interacting family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN77350.1); contains InterPro domain mRNA splicing factor SYF2 (InterPro:IPR013260) Range:  from: 7311001    to: 7313753    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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