Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                 <-----------HVH21                      <---------AHL20(2)  ---------                      ------>MYB46(1)                             <---------DAG2            ---------                      ------>MYB83--------->PCF2                  <---------MYB59    ---------->DOF2                     --------->MYB52(1)                           --------->TOE1(3) --------->AtMYB61                    --------->AtMYB61                             --------------->AGL15  --------->TOE1(2)                   --------->DEAR3(2)                        <---------DAG2 <---------ICU4  ---------                   --------->MYB46(3)                        <----------DOF2--------->YAB1  ---------         <-----------HVH21 <----------DOF2  --------------->AtSPL8--------->TOE2(3)--------->ANAC46 <   atctctctcaccttcacatggaccaacggcttctatgtcccaccaatttgtactctcaatctcctttaccttatttattcattacaccaaagctacgaca  7308300      <----------DOF2     <---------ANAC58     <---------ANAC58         <---------TOE2(3) ----->bZIP60(2)         <---------YAB1 ----->ANAC46           --------->AHL20(2) ------->HVH21          <---------AHL20(2)    <---------------AtSPL8 ----->ANAC58           --------->AHL20(1)    --------------->AtSPL3 ----->ANAC58           <---------AHL20(1)    --------->ZAT6 >ANAC58               --------->AHL20(2)   <-----------GT1                            <---------YAB1 >ANAC46            --------->YAB1      <---------TOE2(3)                   --------->AtLEC2 -->HVH21         <-----------GT1       <---------TOE1(3)               <-----------HVH21 >ANAC58     <---------AHL20(2)       <---------AHL20(2)          <----------DOF2 ----------->GT1 ---------bZIP60(2)<---------YAB1    --------->AHL20(2)       <-----------GT1     <---------MYB46(3)   cgacatggcttttgttttattttcattatatttatgttatttaatgttacagtacatacaatatttagcttttatgtcatgcattggttattagtatttt  7308400                                                                                <---------ZAT14                    ----------->GT1    --------->ALFIN1                        <---------ZAT6                 --------->MYB52(1) <------ZmHOX2a(1)                  <---------ANAC55(2)        <--         <---------YAB1    <---------TOE2(3)  <-----------GT1        --------->AHL20(2)  <---------ZAT14   gtattactagtaagattgaaaacggttttaagaatgtaggagtgtgtttcacaaaattgagagtattgcaattacatgagagtgttcagacttcagagta  7308500                  --------->ARR14(2)                  <---------ARR11(3)                  --------->ARR11(3)     <---------TOE1(3)                  <---------ARR14(2)     <---------TOE2(3)         <---------MYB52(2)         <---------ANAC58         --------->MYB46(3)         <---------ANAC58                                    <---------ANAC55(2)        >>>>>>>>>MYB98              <---------ANAC46                                  <-----------GT1       --------->MYB52(1)    <---------YAB1                                        <---------ICU4       ------>MYB46(1)     --------->CCA1(2)       <------MYB46(1)                 <---------AHL20(2)       ------>MYB83     <---------YAB1----------------------->TaNAC69(2)          --------->AHL20(2)-     <---------MYB59  ----------->GT1<----------DOF2              --------->YAB1  --------->ICU4   -- ---------GT1 <---------LBD16----------->HVH21     <------MYB83  <---------YAB1 ------->TEIL     <---   ttacaaacctaacaaacctggatattgtgatatgactggcttttaggttttgtaggtctcccatttgattataaacaaaatgtatttattacctatattc  7308600                                         --------->ANAC46                                         --------->ANAC58                                         --------->ANAC58                                        ------->GAMYB                                       <---------ALFIN1                                     ----------->RAV1(1)       *TSS                                  --------->ANAC58     <---------GLK1(1)        <---------MYB52(1)        --------->ANAC58     --------->GLK1(1) -------->DAG2                   --------->DAG2     --------->ANAC58 -------->DOF2                  ---------->DOF2     --------->ANAC58                        <-------- ------HSFB2a(2)            <---------YAB1       <-------TEIL<---------------AGL15   <----------DOF2   caaaagtacccttatgttccatgttctcttcttataaagcaacacacaagatgcaagaaatctccataactagagagagaaactaatctttttagtgaga  7308700                                                                                         <---------ALFIN1                                                                                     --------->ZAT2               <---------At4g35610                                                   <---------At4g35610               --------->At4g35610                                                   <---------ZAT2          --------->At4g35610                                                      <---------ALFIN1          <---------At4g35610                                                   --------->AtMYB61          <---------ZAT2                                                     <---------ALFIN1    --------->TOE2(3)                                                       --------->MYB46(3)  --------->ARR11(3)                                                       <------ZmHOX2a(2)  <---------ARR11(3)                                                      <---------ARR14(2)   ------ <---------GLK1(1)             ---------->DOF2                            --------->ARR14(2)   ------ --------->GLK1(1)        ----------->GT1  <---------ZAT14           <---------ANAC46--------->At4g35610 -ZAT6    --------->ZAT2  <xxxxxxxxxxxxxxxxsmallRNA(i)       ---------->DOF2------>ZmHOX2a(2)  <-----   gagaaatcttagagctgagctaagaaaaatgtcaaaagaagtgagtgaagaaggaagacatggcaaagactacgtggatccacctccagctccacttcta  7308800                                                                                ------->GAMYB                                                                                --------->TOE1(3)        --------->At4g35610                                                    <------------AtMYB77        <---------At4g35610                               <---------ALFIN1    <---------At5g28300 --->HSFB2a(2)                       <---------YAB1     <---------ALFIN1     <-----------GT1 --->HSFC1(1)              <-----------GT1       <-------TEIL   ------>ZmHOX2a(1)   --------->At4g35610 ----HSFB2a(2)         <----------DOF2--------->YAB1 --------->ANAC46 ------>ZmHOX2a(1)     ---------   gacatggctgagcttaagctctggtctttttacagagctatcatcgcagagttcatcgccactctcctcttcctctatgtaaccgtagctacagtcattg  7308900                                <------MYB83                                                      <--                                <---------MYB46(3)                                                ---                                <------MYB46(1)                                                  <---                               <---------AtMYB61                                              -------                              <--------P                                                     <-------                           <------NtERF2                                                    ------>NtERF2                           ----------------------->TaNAC69(2)         ------>ZmHOX2a(2)     ---------                  <---------ANAC58                             <------NtERF2  ------>ZmHOX2a(1)<-----                  <---------ANAC58                        <---------AtMYB61---------->ID1  <---------ALFIN1               <---------MYB52(1)                    <---------PCF2  <---------YAB1        --------->DEAR3(1)          ------>MYB83   <---------DEAR3(1)       --------->ALFIN1  --------->ARR11(3)    --------->ATERF1(1)          ------>MYB46(1)<---------DREB2C(2)    <---------ANAC58<---------ANAC46          --------->DEAR4(2)          --------->MYB52(1)--------->ALFIN1    <---------ANAC46<---------ANAC58          --------->DEAR3(2)        --------->AtMYB61<---------ANAC46       <---------ANAC55(1) <---------ARR11(3)    --------->MYB46(3)   --------->ANAC58 <-----------RAV1(1)         <---------ANAC58<---------ANAC58          --------->ORA47(2)   --------->ANAC58------>ZmHOX2a(1)    --------->ANAC46<----------DOF2<----------DOF2 --------->ZAT18 >ATHB12<---------MYB59 <---------ABI4(1) <------NtERF2<----------DOF2===============HOX2a_HOX2a<----   gccacaagaaccaaaccggtccttgtggcggtgttggtttactcggcattgcgtgggcctttggtggcatgatctttgtcctcgtctattgcaccgccgg  7309000          <---------ICU4     --------->At5g28300     <---------MYB52(1)    --------->LBD16                                       ------>ZmHOX2a(2)    ----------->GT1                                      <------ZmHOX2a(2)  <---------LBD16                                       <---------ARR14(2) -------ARR14(2)                                        <---------ARR11(3) ------>ARR14(2)                                        --------->AGP1 ------CCA1(2)                                          <---------AGP1 -->ATERF1(2)                                           --------->ARR14(2)                  <-------- --LBD16  <---------AHL20(2)                            --------->ARR11(3)                --------->YAB1 >ABI4(1)--------->ICU4  --------->TOE2(3)              <-----------ARR10            <-------TEIL ----DEAR3(2)           <----------ID1                  --------->ARR14(3)        --------->YAB1 -----MYB52(1)   --------->LBD16     --------->TOE2(3)  <---------ARR14(3)       <---------ATHB12 ---   tatctccggtaaatatttccacaaaaaccacaaaaatttccataaacttcagtttcaagatcttaatatgaagttgtttagcaatgatacatttataatt  7309100                                      <----------DOF2                                     <---------DAG2                                   <---------ARR11(3)                                   --------->ARR11(3)                                  --------->RVE1(1)      --------->AHL20(1)                                  --------->CCA1(1)      <---------AHL20(2)                                  <-----------GT1        <---------AHL20(1)                           ----------->GT1         ----------->GT1                   <-----------GT1    <-------TEIL           <------MYB83            <------MYB46(1)             ------>ZmHOX2a(1)   --------->CCA1(2)       <------MYB46(1)         <------MYB83               --------->TOE2(3) -YAB1                    --------->MYB59         --------->MYB59       <----------DOF2      -------- ------->DOF2             --------->MYB46(2)     <--------P             <---------DAG2       --------   caaagatacatttttagcaagtttttgtttggtaaaatacctttttagcaagttggtaaaatatttcaacaaaactttatcctaaaattactaaacctta  7309200  Previous    Next  AGI:  At2g16850.1    Description:  PIP2;8/PIP3B (plasma membrane intrinsic protein 2;8); water channel. Identical to Probable aquaporin PIP2-8 (PIP2-8) [Arabidopsis Thaliana] (GB:Q9ZVX8;GB:Q0WS43); similar to PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3), water channel [Arabidopsis thaliana] (TAIR:AT4G35100.1); similar to aquaporin [Brassica oleracea] (GB:AAG30607.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 7308663    to: 7310519    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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