Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------DAG2                                                          <----------DOF2  xxxxxxxxxxxxxxxx>smallRNA(le3)                                                        ------>ZmHOX2a(1)  <---------MYB52(1)                                 <-----------ARR10 <------------------------ANAC81                           <----------DOF2    <----------DOF2       <<<<<<<<<TBF1                   <-----------GT1        <---------CCA1(2)      <<<<<<<<<TBF1               <----------DOF2  <---------CCA1(2)<------------------------ANAC81  <------------------   taatgaagtttgaacttctttctacttctctttcaaatctctccatctctttctcttcctctttttcttcttcttcggtttcttcgtttcagtttttttt  7302500                                                     <--------P                                                    <-------GAMYB                                                   <------MYB83                                                   <---------MYB46(3)                                                  <---------AtMYB61                                              <---------ANAC58                                              <---------ANAC58                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                              <---------ANAC46                                             xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             xxxxxxxxxxxxxxxx>smallRNA(s)                                         <---------ANAC46                                         <-----------RAV1(1)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                       <xxxxxxxxxxxxxxxxsmallRNA(s)                                       --------->ZAT14                                       <---------ZAT14   <xxxxxxxxxxxxxxxxsmallRNA(i)                                       --------->At4g35610------>ZmHOX2a(2)                                   --------->MYB52(1)<---------WOX13(1)                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                    --                                  xxxxxxxxxxxxxxxx>smallRNA(i)                                    <xx                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                        ---------                                 xxxxxxxxxxxxxxxx>smallRNA(s)                              xxxxxxxxxx                                 <---------MYB52(2)<------MYB46(1)                        --------->YAB1                                 xxxxxxxxxxxxxxxx>smallRNA(i)         --------->ARR11(3)  xxxxxxxxxxx                                xxxxxxxxxxxxxxxx>smallRNA(i)          <---------AHL20(1) xxxxxxxxxxxx                            --------->YAB1<xxxxxxxxxxxxxxxxsmallRNA(s)--------->AHL20(1)xxxxxxxxxxxxx      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->ALFIN1     --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) ------ANAC81<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->MYB59<---------TOE2(3)      --------->AtLEC2   ttttttaaaaactgaaccatagaaactaaatcaaaactaactgctgtggggtttggttgatcccattaagaatattttggaccaaaaaccattcaaaaga  7302600            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           --------->AtMYB61        xxxxxxxxxxxxxxxx>smallRNA(i)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   --------->At5g28300  ----------->GT1 ------->MYB52(1)    <----------DOF2 xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxx>smallRNA(se3)      <---------YAB1         ----------->GT1 xxxxxxxxxx>smallRNA(si3)      --------->YAB1    <-----------GT1           <---------YAB1          -- xxxxxxxxxx>smallRNA(si3)      <---------ICU4<----------DOF2        <----------DOF2               ---   caaacggtgaagaccacatctcactttgcaaaatcatgagagcaattcttttttcagcctgtgaaaatttcttttttataaatgggtttgtagtttcgaa  7302700                                                                     <---------AHL20(1)                                                                     --------->AHL20(1)                           <---------TOE1(2)                         --------->ARR11(3)                           <---------TOE2(2)                        <---------AHL20(2)                           <---------TOE2(3)                   --------->At5g28300                     <<<<<<<<<<GT-3b                          ----------->GT1                  <---------AHL20(1)                       --------->MYB52(1)                  --------->AHL20(1)                      ------->GAMYB           <---------At4g35610                          <---------At4g35610           --------->At4g35610                         <-----------GT1<---------YAB1 ------->DAG2     --------->ARR11(3)                  <-----------GT1<---------ARR11(3)   <---------- ------->DOF2     <---------ARR11(3)              --------->ICU4   --------->ICU4      <---------AHL20(2)   taaagttgaattcttctgaatatttttcttaggtttcacatgggtttttgtaatttttaactgactgtaaatatttttgaattttgaatttttttcagca  7302800                                                                                                   --                                                                                         ---------->DOF2                                                                                        --------->YAB1                                                                                       ----------->TBP                                                                                     --------->HSFB2a(2)                                                             <-----------GT1         <---------HSFB2a(2)                                                 <---------DAG2             <---------ZAT6         <- -GT1             ---------->DOF2                <----------DOF2          <---------ANAC46  ---------   tgggtttgtgtaatttctaacaaagttgaattctattgaatatttcgaatacttttccatatgtttccacatcgtttagtgtaatttctataaaagttta  7302900                                                --------->ANAC55(2)                                                <---------ANAC55(2)                                           --------->ANAC58                                           --------->ANAC58                                          --------->SPL7                                          <-------TEIL                                          <---------TOE2(2)                                      --------------->AtSPL3                           <---------TOE2(3) <---------MYB52(1)                      --------->AHL20(2)  ------->TEIL                      <---------AHL20(2) <---------MYB52(1)                                    ------                ------------>CBF      <---------------AtSPL3                                   <-----               <-----------GT1      ------------------>SPL14                                ---------           <---------TOE2(3)     *TSS --------------->AtSPL8--------->At4g35610             <--------     <---------YAB1  <---------AHL20(1)  <---------SPL1(1)  <---------At4g35610             --------- ------->ARR11(3)    <---------AHL20(2) <---------SPL7 <---------ANAC58                    --------->LBD16 --------ARR11(3)    --------->AHL20(2)<---------ANAC46<---------ANAC58                    ---------- -->GT1 <---------WOX13(1) <---------TOE1(3) --------->DOF5.7(2)                           <---------   aaatcttttgattaatatttcaatttttttaggtttttgctccgtacgttacctattgggtttgctgtgttcatggtccatttggctactatccccataa  7303000 <---------ARR14(2) --------->ARR14(2) --->ARR14(2) ----ARR14(2)                                               <---------------AtSPL8 ------>AGL15             <----------DOF2                   --------------->AtSPL8 -------AGL15        ---------->DOF2             ---------->DOF2                     ------->GAMYB<-- >ANAC46  <---------AHL20(2)<---------AtMYB61   --------->AHL20(2)                   <---------ALFIN1 ------->AGL2    --------->At4g35610       --------->AHL20(2)        --------->YAB1 --------->MYB46(3) --------AGL3    <---------At4g35610  <-------GAMYB    <----------DOF2  ---------->DOF2           ---   ctggaactggaattaatccagctaaaagctttggtattgctgttataaaataaaagactttatttgtactaaaataaagagacacaaccacattttgaac  7303100        <---------YAB1                   <---------YAB1                <---------YAB1 <----------DOF2                       <---------At4g35610 --------->TOE2(3)              --------->GLK1(2) --------->TOE2(3)              <---------AHL20(2)        --------->YAB1   --------->AtLEC2         < -------ARR11(3)               <---------YAB1  <-----------GT1     <---------STY1(2)   <-------TEIL - ------>ARR11(3)              <---------AHL20(2)  --------->YAB1   --------->STY1(2)  --------->CCA1(2)   tatctttaaaattatagaaagactcagactatttttatttatgctgatttaagcatactaacataaactagctatcaatgcaagagagatacaatctggt  7303200                                             --------->LBD16                                            --------->LBD16                                           <---------LBD16                    --------->PCF2  <---------HSFC1(2)                   <---------PCF2   --------->HSFB2a(1)                   --------->TCP15(1)      --------->LBD16        --------->LBD16              <---------ANAC58      <---------HSFB2a(1)           <---------LBD16              <---------ANAC58      --------->HSFC1(2)        <---------ARR14(2)         <---------MYB52(1)        --------->ARR14(2)         --------->ARR14(2)    <---------ZAT2      ------>ZmHOX2a(1)          <---------SPL7             --------->MYB55(2)      <---------At4g35610     --------------->AGL15      <---------ANAC58            <---------MYB46(3)      --------->At4g35610    <-----------------AGL1      <---------ANAC58           <---------AtMYB61        --------->ZAT2 ---------HSFC1(2) --------->TCP20 <---------ARR14(2)   <---------AtMYB61 <----------DOF2      ------ -------->HSFC1(2)----------->HVH21------->TEIL--------->ALFIN1  <---------ALFIN1   ----------->RAV1(2)   gaagtttcctcgtttggcatgggaccctcgactggcgaaccctcccccggtgtagattgtggtggttccacggtttctttcaattcagctggactgtcaa  7303300                                                             ------>NtERF2                                                          <---------ATERF1(1)                                                          ------>ZmHOX2a(1)                                                        ----------->RAV1(2)                                                        --------->At4g35610                     <---------ANAC46                   <---------At4g35610<---------ALFIN1                    <---------At4g35610             <---------ATERF1(1)  ------>NtERF2                    --------->At4g35610           <------NtERF2          ----------->RAV1(1)                   <---------MYB46(3)             --------->ATERF1(1)   --------->DEAR3(1)                  <--------P                     ------>NtERF2        ------>NtERF2                 <                 <-------GAMYB                   <---------RAP2.6(3)  --------->LBD16         -------                --------->MYB55(2)               <-----------HVH21   --------->ANAC46         <------                <---------MYB46(3)              --------->DEAR3(1)  <---------LBD16         <--------               <---------AtMYB61           --------->At4g35610 <---------DAG2 --------->DEAR3(1)  <--            <-----------RAV1(1)     --------->HSFB2a(2) =============================RAV   <---------At4g35610 --->WOX13(1) <---------MYB52(1)--------->O2    <---------ANAC46<----------DOF2            --------->At4g35610   tctgtcattaatctctggtggttgctgagacgactcgtctcgagcttctgccgtcgtctcctgcgccttttccgccaacaccgtctcaagagtagctaac  7303400  Previous    Next  AGI:  At2g16835.1    Description:  water channel protein, putative. contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 7302933    to: 7303400    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version