Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                      <---------AGP1                                      <---------ARR14(2)                                      --------->AGP1                                      --------->ARR11(3)                                      <---------ARR11(3)                         <---------At4g35610                                     <---------CCA1(2)                  <---------ANAC58                                    ----------->ARR10                   <---------ANAC46                                 =============================================MYC_MYB                                ----------->GT1                         <---------ANAC58    --------->LBD16             <------MYB83                        <---------ANAC58   --------->ANAC58             <------MYB46(1)                     <---------TGA1a   --------->ANAC46        <---------ANAC55(2)                      <---------O2 --------->At4g35610   --------->ANAC58        --------->ANAC55(2)                      <---------ANAC58  <---------LBD16          <---------ANAC46                         --------->TGA1a ---------ARR14(2)        <---------LBD16                           <---------ANAC46 -------->ARR14(2)       --------->MYB52(1)                  <---------LBD16   <-----------RAV1(2) -------->GLK1(2)       <---------SPL7--------->ARR14(2)   <---------ARR14(2) <---------At4g35610 ------>HSFB2a(1) ------>MYB46(1)<-------GAMYB       =========================bZIP_DOF ------>HSFC1(2)  ------>MYB83  <---------MYB46(3)   ---------->DOF2--------->ANAC55(2)   agaatccgcaagaagaaacctcccatcttacggatggttagatcttggtcgaatacaaaggaatacggagacgtgcttggagcagatgataagatgagag  7295600                                                                                      <---------LBD16                                 ---------->DOF2                                    --------->ARR11(3)                             <-------MYC4                                           <---------ARR11(3)                             ------->MYC2                                           --------->ARR14(2)                             <-------MYC2                                           <---------ARR14(2)                             <-------MYC3                ----------->HVH21         --------->CCA1(1)                             ------->MYC3     <---------AtMYB61                    --------->RVE1(1)                           <-------TEIL       <---------TOE1(3)      --------->MYB52(1)    <---------                 <------ZmHOX2a(2)            <---------TOE2(3)      ------------>MYB.PH3(1)<------ZmHOX2a(1)   acttagagtagttgtatcgatccaataggcacatgtaaagactaggttgaggttgagatgggacgatgagaaaacggttgcaaaaatatctggaggacaa  7295700                                                                                              <------                                                                                ----------->RAV1(2)                                                                               <------ZmHOX2a(2)                                                                              --------->ARR14(2)                                                                              <---------ARR11(3)                                                                              <---------ARR14(2)                                                                              --------->ARR11(3)  <--    >>>>>>>>>>WRKY38                                            --------->ARR14(2)          <--------    >>>>>>>>>>WRKY26                                            --------->GLK1(2)           ---------    >>>>>>>>>>WRKY43                                            <---------ARR14(2)------>ZmHOX2a(1) --------->At4g35610         ------->TEIL                 <-----------TGA1  ----------->ARR10 <------ --------->CCA1(2)          <---------CCA1(2)   <---------TOE2(2)      ==================HOX2a_HOX2a <---------At4g35610  <---------ALFIN1      <---------LBD16    <---------GLK1(2)------>ZmHOX2a(2) <-- -ID1        <----------DOF2<---------GLK1(2)   <---------TOE1(2)      <------ZmHOX2a(2)   <---------CCA1(2)   gagagatgaccaaaactttgagacacacttgaatctcatcactgacttcggaggtaatctcgtcagaatctcgatcagtagatcctgagggatatatctt  7295800                    <---------ANAC58                    <---------ANAC58                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              --------->ARR11(3)              <-----------ARR10              <---------ARR11(3)                                                                  --- ---ANAC58    <---------ARR14(2)                                                                 ---- -------ANAC58<---------AGP1                                                       <---------ANAC46 -ARR11(3)   <---------ARR14(1)                              ------>ZmHOX2a(1)     <---------ANAC58 >ARR11(3)   <---------CCA1(2)                           --------->AtMYB61         <---------ANAC58 ---ANAC58<---------LBD16 <----------DOF2           --------->HSFB2a(2)          <---------At5g28300 -------ANAC58--------->ARR14(2)                    <---------HSFB2a(2)    <----------DOF2     ------   gcgacccaagttttcggatcttgcttcgctcttcgtctacttctacttcttgttctcgacctcctcttcattctctccttttgtaccgtggcaaggagaa  7295900                                               ----------->RAV1(1)                                               --------->ANAC46                                              --------->MYB46(3)                                             --------->ANAC58                                             --------->ANAC58                                            --------->PCF2                                          <---------At4g35610                                          <---------HSFC1(2)                                          --------->At4g35610                                          --------->HSFC1(2)  --------->HSFB2a(1)                    --------->ANAC58                          --------->ANAC58  <---------HSFB2a(1)                    --------->ANAC58               --------->ARR11(3) -------->GT1                      <----------DOF2        <---------CCA1(2)        --------->ANAC58 ------->GT1                       --------------------->WRI1          <---------At4g35610 ---->DOF2  <-----------RAV1(1) <---------ALFIN1      <----------DOF2<-----------RAV1(2)          <--   aggaaaatcccattatgtggcacaacaacaatctccactttggaagcacccacaaactttatatccttgtttcagatgttgagacaagacagagttagtc  7296000                                                                   --------->HSFB2a(1)                                                               <---------TGA1a                                                               --------->O2                                                               --------->TGA1a                    --------->At4g35610                        <---------O2             ------->TEIL           --------->ANAC58            <---------TOE2(3)       ======================================           --------->ANAC46*TSS        <---------TOE1(3)   <-----------HVH21 <-----------RAV1(1)  --- ----NtERF2--------->ANAC58<---------REM1(1)          ----------->HVH21    --------->YAB1      <-----   ggcctagactcacacggacaagagcagagaagtagcaaattagggtttgaagagtgatgacggtcacgagtcttccatcatgttgctatgtatatagatc  7296100                                                       ------>ZmHOX2a(2)                                                     --------->ARR11(3)                                                  <---------WOX13(1)                              <---------ANAC46    <--------P                              <---------ANAC58   <-------GAMYB           --------->YAB1                  --------->TOE2(2)          <---------At4g35610    --------->LBD16                  --------->TOE2(3)          <---------ZAT2    --------->At4g35610 --------->ANAC46 --------->TOE1(2)          --------->At4g35610 ------->GAMYB ======MYC_MYB    <---------MYB59           --------->MYB52(2) <---------At4g35610            <------ ----->P <------------CBF  <----------DOF2<--------P <---------AGP1<---------ANAC46       <----------DOF2 -ZmHOX2a(2)    ------->TEIL  <---------ANAC58  <---------MYB46(3)<---------LBD16  <---------ATHB12 <   aacccgacccaaattgtgaacctaagtaactttcgggttatcgggttagctggttgatctggttcaactgcggattaataaacaaatgaattctttcttt  7296200                                         <---------ARR11(3)            --------->AHL20(2)           --------->ARR11(3)            <---------AHL20(2)  <-----------GT1       --------->AHL20(2)  <---------AHL20(2)                           <----------DOF2       <---------AHL20(2)<---------AHL20(2)                          <-----------GT1   <---------YAB1       <---------AHL20(1)                      <---------GLK1(2) ----DOF2 --------->AHL20(2) <---------AHL20(2)          xxxxxxxxxxxxxxxx>smallRNA(i) ----------DOF2         --------->AHL20(1) ------>ZmHOX2a(2)--------->TOE1(2)<---------TOE1(2)  -----   ttcttttgataaatttatatatcatatatatttttttcggtatgatcttagatttcatagaacctagaatttcactttctaggttttatatgtaagacaa  7296300                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                                                  <---------At5g28300                                                                 <-----------GT1                                                        --------->CCA1(2)                                                       --------->ARR11(1)                                                       --------->ARR11(3)   xxxxxxxxxxxxxxxx>smallRNA(i)                                                       <---------ARR14(2)   <----------DOF2                                                     ----------->ARR10<---------MYB52(1)                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                         xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <---------At4g35610                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ---------->ID1                          --------->AHL20(1)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------MYB52(1)                          --------->AHL20(2)   ---------->DOF2  <xxxxxxxxxxxxxxxxsmallRNA(s)                          <---------AHL20(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->DOF2              --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <-------GAMYB    --   aagaaattttcacataagtggatgaaaaaaaattgttctcatggtttgtcaaagtgagatatggttttcaccgtttgtcttttcagttgttttcagacca  7296400                               <xxxxxxxxxxxxxxxxsmallRNA(s)                              --------->ZAT14                              <xxxxxxxxxxxxxxxxsmallRNA(s)                              <---------ZAT14                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            --------->ANAC46                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <xxxxxxxxxxxxxxxxsmallRNA(s)                           <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          --------->ANAC46                          <---------ALFIN1                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       --------->MYB46(3)                      <xxxxxxxxxxxxxxxxsmallRNA(s)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     --------->ANAC46                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     ------>MYB46(1)                     ------>MYB83                   <---------MYB59                   ------->GAMYB<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   --------->AtMYB61                  --------->MYB46(3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 -------->P---------->DOF2                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 --------->ANAC58                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <---------At4g35610  <xxxxxxxxxxxxxxxxsmallRNA(i)              --------->At4g35610 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------------AGL15<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   --------------->AGL15<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <-----------------AGL3<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <-----------------AGL2--------->AtMYB61<xxxxxxxxxxxxxxxxsmallRNA(i)     ------------------------>ANAC81 ------->ARR14(2)--------->ANAC58<xxxxxxxxxxxxxxxxsmallRNA(s)     ----------->GT1          ----------   aaatactcttaatgggagcaaccaaaccacacagcacttgatttcggtttagtttctgtagttcaattttgaaaaaaaaaaaaaaaactgaaacaaagaa  7296500  Previous    Next  AGI:  At2g16810.1    Description:  F-box family protein (FBX8). Identical to F-box only protein 8 (FBX8) [Arabidopsis Thaliana] (GB:Q84X43;GB:Q9SLD8); similar to F-box protein-related [Arabidopsis thaliana] (TAIR:AT2G40910.2); similar to F-box protein-related [Arabidopsis thaliana] (TAIR:AT2G40910.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70931.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 7294494    to: 7296027    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version