Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------ANAC46                      --                                                             <------MYB83                        ----                 --------->ANAC55(2)                         <------MYB46(1)                    XXXXX     --------->ANAC58                                        <---------ANAC55(2)              <------     --------->ANAC58  <---------ANAC58                      ----------->GT1           <---------ARR11(3)  <---------REM1(1)*TSS<---------ANAC58         --------->ARR14(2)           <------------CBF ------- -------->YAB1   <---------ANAC55(2)      <-----------GT1   --------->MYB59<---------YAB1     <------ --------ATHB12 <-------TEIL  ---------->DOF2   <---------ARR14(2)<------------CBF     --------->ARR11(3) ---->AtMYB61 <---------ARR14(2)   --------->ANAC58         --------->MYB111(1)        --------->GLK1(2) ->AtMYB61    --------->ARR14(2)   --------->ANAC58         --------->MYB46(2) ----------->GT1-------   aatggtgaagcaattggatacgttttcttgatcaaagacgaaattcacaaaattcgctagattaggtgaattggattagaattgataaaaatctaataaa  7292400                         <---------ANAC58                         --------->TGA1a                         <---------ANAC55(2)                         --------->ANAC55(2)                         <---------bZIP60(2)                         <---------bZIP60(1)                         <---------ANAC58                         <---------TGA1a                                                      <------                         =================bZIP_DOF                                 -------->ATHB1                         <---------O2                                              <---------ICU4          --------->ATHB12                                            --------->YAB1   <-----------GT1  --------->YAB1         --------->O2                                <---------YAB1--------->ATHB12 <---------YAB1          --------->bZIP60(1)     ----------------->AGL1--------->AHL20(2)    <------- --------->ICU4   <---------MYB46(3)             <-----------------AGL1<---------AHL20(2)    -------- ------->YAB1    --------->ALFIN1              <------ZmHOX2a(1)   --------->YAB1  --------->ATHB51 ----->AHL20(2)<------MYB46(1)                <------MYB46(1)     <---------YAB1   <--------ATHB1 XXXXXXXXXXXXXXX>MIR418  ============================MYC_MYB    <---------ICU4    --------->ICU4 ---AHL20(2)   <------MYB83----------->HVH21 --------->MYB59    -------->HAHB4    <---------YAB1 -->AHL20(2)  --------->MYB46(2)            <--------P          --------->YAB1    <---------ATHB51 ---AHL20(1)  --------->MYB59  <----------DOF2<------MYB83     <---------YAB1  ------------>ATHB5 -->AHL20(1)  --------->MYB111(1)  XXXXXXXXXXXXXXXXXXXX>MIR391 --------->ICU4--------->ANAC46<-------   ataataataaactgattaggtggtgagacgtgactttgcaagagaggtaggaccaaagatggaaaatgattataaaaatacacaattattgacaattttt  7292500                                                                                         --------->ZAT6                                                    --------->YAB1                      <---------ZAT14                                         --------->AHL20(2)                             --------->ZAT14 ---AHL20(2)            --------->ARR11(3)          --------->AHL20(2)          ------->TEIL --AHL20(2)             <---------ARR11(3)--------->AHL20(2)                   <---------AtLEC2 ->AHL20(2)       ----------->GT1 --------->YAB1 --------->WOX13(1)           <-------TEIL --AHL20(1)----------->GT1 <----------DOF2<---------AHL20(2)                 --------->AtLEC2--------   tttttttttttgaatgtaaattgataaatctttttttcataaaaaaaatttcaattaaaaaatacaatttctcttatacatgcatgtttctacactattc  7292600                                                                                <---------AHL20(2)                      ----------->GT1                                           <---------AHL20(1)                    ---------->DOF2        <---------ARR11(3)                   --------->AHL20(1)                 --------->AHL20(2)        --------->AHL20(1)                  --------->YAB1      --                --------->AHL20(2)         <---------AHL20(1)                 <---------YAB1<--------             --------->AHL20(2)            --------->ARR11(3)               <---------ZAT6  <--------            <---------ATHB12              --------->YAB1                  --------->YAB1 <-----------GT1      <----------DOF2--------->DAG2 ----------->RAV1(1)             --------->YAB1   <---------AHL20(2) ->ZAT14    --------->AHL20(2)     <----------ID1     --------->AtMYB61--------->YAB1--------->AHL20(2)   tctaccttctttcaataaataaaaaagtaaaaactatacaacaaaaatattcttcaccaaaactgaacatgaataatagtattatattttaatacttttt  7292700                                                                    --------->ANAC58                                                                    <---------TOE2(3)                                                                    --------->ANAC58  <---------AHL20(2)                                                             <------------CBF       <---------AHL20(2)                                                    --------->AHL20(1)             <---------AHL20(1)                                                    <---------AHL20(1)  --------->ANAC58                                                    --------->AHL20(2)  --------->ANAC58                                                    <---------AHL20(2)<------ZmHOX2a(1)   <---------HSFB2a(2)                      ----------->GT1    <--------HAHB4<---------AHL20(2)          --------->AHL20(2)                   --------->TOE2(3)     --------->YAB1<---------AHL20(1)          <---------ARR11(3)                <---------AHL20(2)      <---------ATHB12    --------->ATHB12       --------->AHL20(1)        <------ZmHOX2a(2)               <---------YAB1 --------->AHL20(2)          --------->ARR11(3)        =====================================HOX2a_HOX2a <------------CBF  ----------->RAV1(1)     -- ------->AHL20(2)  <----------DOF2    ------>ZmHOX2a(1)--------->AHL20(1) <----------ID1  --------->HSFB2a(2) -DAG2 <---------ARR11(3)    <-----------GT1--------->AHL20(2)  --------->YAB1     <---------AHL20(2) --DOF2--------->ARR11(3)<---------AHL20(2) <---------AHL20(2)<---------WOX13(1)  --------->AHL20(2)-   tttatataagatcaacatttactttagttaatttccattcctataattaactaatattttattgattgataaggaagcaacaaaatatatttttagaaaa  7292800                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                -----                                                                         --------->MYB52(1)     <----                                                         --------->ARR14(2)                     <----           ------>ZmHOX2a(1)                             <---------ARR14(2)                    ------       <-----------GT1                      ------>ZmHOX2a(1)    <---------MYB52(1)            <----- -------->DOF2    *TSS                     --------->TOE1(3)--------->TOE2(2)      --------->DAG2---- -------->DAG2   <------------CBF          --------->TOE2(3)--------->TOE1(2)     ---------->DOF2<---   aaaaagttttatcctcaccgattgagagcaaagtctcactctcttccttaagctctgagaaacctccgataagcttatcggacaaaaagagaagtagacg  7292900      <---------ARR14(2)      --------->ARR14(2) ------NtERF2 ---->NtERF2 --------RAP2.6(3) ------>DEAR3(1) ------>DREB2C(2) ------>RAP2.3(3) ------>RRTF1(2) ------>ANAC46 ------>RRTF1(3) ------>RAP2.3(2) ------>RAP2.6(2) ----->RAP2.6(1) ----->ATERF1(1) ----->ERF1 ----->RRTF1(1) ----->RAP2.3(1) -----DEAR4(2) ->NtERF2                                                                                        ---- -----ATERF1(1)                                                                               ------- -----RAP2.3(1)                   --------->ANAC58              <---------ARR11(3)            ------- --->ANAC46              ------>ZmHOX2a(1)                  <---------ICU4            --------->DEAR3(1) ----DEAR3(1)        ------->GAMYB--------->ANAC58          --------->YAB1         <---------ALFIN1 ----->ORA47(2)     --------->MYB46(3)                     <---------ATHB12   <-----------GT1 ------- ---NtERF2  <----------DOF2       --------->ANAC46       --------->WOX13(1)<---------ICU4   <--------   ccgccatggataggcttttgcaacctccttcttctcactcaattgctccctccaaattccaatcaagaccatctcccttattactccaccgtctccactc  7293000      --------------->AtSPL8    --------->TOE2(3)  ------->TEIL  <-----------ARR10                               <---------At4g35610  <---------ARR14(2)                              --------->ZAT2  --------->ARR14(2)                              --------->At4g35610                <---------LBD16  <---------ARR11(1)                          --------->ARR14(2)             --------->GLK1(2)  --------->GLK1(2)                     --------->ANAC58               <-----------HVH21   <-------TEIL <---------ARR14(1)                     --------->ANAC46               <-----------TGA1  <---------ARR14(2) ----->MYB52(1)                      ----------->HVH21                <---------ANAC58   --------->ARR14(2) -->ANAC58                          <-----------HVH21      <---------ANAC58  --------->ARR14(2)    -- -->ANAC46            ------>ZmHOX2a(1) --------->ANAC58   <---------ANAC58  <---------ARR14(2)   <-- -->ANAC58  <----------DOF2  ------>NtERF2 --------->DEAR3(1)------>ZmHOX2a(1)     --------->DEAR3(1) -ALFIN1    <---------DAG2  --------->DEAR3(1)<---------ARR14(2)      <---------ANAC58 --------->LBD16   aacgaatcttagtacttttccctcctctcgccgtctcgagtcacgccgaatcagctccatttcctgcttcttccgtcagaatccatcgccggatacatct  7293100                                      --------->HSFB2a(2)                           <---------ANAC58                           <---------ANAC58                          --------->ATHB12                         =======================HOX2a_HOX2a                         <---------YAB1                         <---------LBD16    ------>ZmHOX2a(2)                       <---------ANAC58                     ------>MYB83          <------ZmHOX2a(2)                     <---------AHL20(2)                   --------->TOE2(3)      <---------ARR14(2)             --------->ZAT14   <---------ANAC58           <---------MYB59 --------->MYB46(3)         --------->YAB1<---------ANAC58          <---------ANAC58  ======================HOX2a_HOX2a <------ZmHOX2a(1)   --------->ARR11(3)          <---------ANAC58  <------ZmHOX2a(1)    <---------At4g35610 ------->LBD16 ----------->GT1 <---------ANAC58  <---------ANAC46--------->LBD16 --------->ARR14(2) -------LBD16<---------ZAT14<---------WOX13(1)  <-------TEIL------>MYB46(1) --------->MYB52(1)   ccaggattgaatcagagtagtaatttcttgattgcttcttctcaaaccgatgcgtcgaaacctaatccaggatttatccaacggatcgtgagcagttttg  7293200                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                       <------MYB46(1)                                                                                   <---------GLK1(2)                                                                                   --------->ARR14(2)       ----------->GT1                               ----------->GT1               <---------ARR14(2)      --------->ANAC58                 <---------ANAC58                         --------------->AGL15      --------->ANAC58                 <---------ANAC58            <---------TOE1(3)   <------MYB83   ------->GAMYB                       --------->ANAC46            <---------YAB1  --------->ARR11(1)  --------->ANAC58                     --------->ANAC55(2)         <---------TOE2(3)  <---------AtMYB61  --------->ANAC46       ------->TEIL  <---------ANAC55(2)   <---------TOE2(3)  <---------------AGL15  --------->ANAC58    <---------YAB1 <-----------GT1 <---------MYB46(3)        <-----------------AGL2   agcaacgcaaggtaattcacaactatgaatcttctccatttacgtctctgtgtattggttatataggttatggtttcagttactagatttggtgtttctg  7293300  Previous    Next  AGI:  At2g16790.1    Description:  shikimate kinase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO62220.1); contains InterPro domain Carbohydrate kinase, thermoresistant glucokinase; (InterPro:IPR006001); contains InterPro domain Shikimate kinase; (InterPro:IPR000623) Range:  from: 7291039    to: 7292319    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g16800.1    Description:  high-affinity nickel-transport family protein. similar to high-affinity nickel-transport family protein [Arabidopsis thaliana] (TAIR:AT4G35080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67732.1); contains InterPro domain Nickel/cobalt transporter, high-affinity; (InterPro:IPR011541) Range:  from: 7292818    to: 7294447    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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