Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ------>NtERF2                                                  --------->ANAC58                                                  --------->ANAC58                                                  --------->ANAC46                                              ----------->RAV1(2)                                              <---------ANAC58                           --------->ICU4                                              <---------ANAC58    --------->ATHB51----------->RAV1(2)                                          --------->GLK1(1)       <---------ICU4<-----------GT1                                  <---------At4g35610      --------->ANAC58   <---------DAG2                                  --------->At4g35610  <---------MYB52(2) <---------ATHB12  <--------                           --------->YAB1 <---------GLK1(1)--------->ANAC58   <----------DOF2--------     ----------->GT1  ----------->GT1  <---------YAB1<---------ALFIN1--------->YAB1  <-----------HVH21   aagagaatagtacaaatgagaagaaggaataaaaacagcttacgatttccctgcgccacttacgcccataatcgcaatgactttacctgtcactatgaca  7291900                                                                           <---------DDF1                                                                           ------>NtERF2                                                                           <---------RAP2.6(3)                                                                          --------->DEAR3(1)                                                                          --------->RAP2.6(2)                                                                        <---------At4g35610                                                                        --------->At4g35610                                                                      <-----------GT1                                                                  --------->ICU4                                           <-----------GT1     <---------MYB52(1)                   <------ZmHOX2a(2)       --------->YAB1     <-----------TGA1                  <---------ARR11(3)    <---------ICU4        <---------RAP2.6(3)<---------ANAC58   ----------->RAV1(1)                  --------->YAB1     <---------At5g28300   <---------ANAC58 -YAB1            --------->ARR11(3)   <---------YAB1  <---------At4g35610--------->ANAC46 ->YAB1 --------->MYB52(1) --------->TOE2(3)           --------->At4g35610----------->HVH21       <--   atgagcaacaaaactgatgagatcatttacattaatggaccataataacaatattggagcttaccgtcatttttagccgacatgcttgatgaaacaggtt  7292000                                            --------->ARR11(3)                                            <---------ARR11(3)                                   ----------->GT1                                              -----                                  --------->DAG2                 <---------At4g35610            <----                                 ---------->DOF2             --------->TOE2(3)                  -----                              --------->ANAC58       --------->ZAT6                      <---------ICU4    <---------YAB1            --------->ANAC58     <-----------GT1    <---------YAB1    ------>ZmHOX2a(1) -------AtMYB61    --------->GLK1(2)       <---------CCA1(2) --------->YAB1            <---------MYB59   ttggtgattcttgaagaaaacaatctgtgatcaagaaaagtaaacatatctattaactctcaatcttagcttataattcttcaatatttcctaatttcat  7292100                                             ----------->GT1                                           ---------->DOF2                                      <---------ARR14(2)                                  <------ZmHOX2a(2)                               <---------At5g28300                                  --------->SPL1(1)        --------->ARR14(2)    --------->MYB52(1)                                   <---------SPL7        <---------ARR14(2)  <---------MYB52(2)                                     <---------ZAT14    <------ZmHOX2a(1)      --------->ANAC55(2)          ----------------->AG       --------->ZAT14  < ------>RAV1(2)            <---------ANAC55(2)          --------->TOE2(3)        <---------------AtSPL3 -----At4g35610          <---------ATHB12--------->ANAC58            <---------ATHB12--------->SPL1(2) ---->At4g35610      --------->AHL20(2)  --------->ANAC58<---------------AGL15   <---------------AtSPL8   ctgagaggagtatatgactcaaattcaataagtaacggtggaaacgaaagaaaaaaatccctaattttgaaatcaagaacaaaactgtacggatcaatgt  7292200                                                                                                    -                                                                                                   <-                                                                           <---------ANAC58     -----                                                             --------->GLK1(2)            --------->ANAC46                                                            <---------GLK1(2)          --------->ANAC46   <-----------GT1    --------->ANAC58                    ----------->ARR10<---------ANAC58  -------- ---------YAB1        --------->ANAC58        --------->CCA1(2) <----------DOF2      --------->ANAC46   ttattatacgtttcaaaacttactaagcaaaatttagttttctgtgagagacgacttactgagattctttttgtgtttcttgactctccacaacaccacc  7292300                                                             <---------ANAC55(2)                   --                                                             <------MYB46(1)                     ----                 --------->ANAC55(2)                         ----------->GT1                    XXXXX     --------->ANAC58                                        <---------ANAC46                 <------     --------->ANAC58  <---------ANAC58                      <------MYB83              --------->ARR11(3)  <---------REM1(1)*TSS<---------ANAC58         <---------ARR14(2)           <------------CBF ------- -------->YAB1   <---------ANAC55(2)      <-----------GT1   --------->MYB46(2)         --------->GLK1(2) --------ATHB12 <-------TEIL  ---------->DOF2   --------->ARR14(2)<------------CBF     <---------ARR11(3) ---->AtMYB61 --------->ARR14(2)   --------->ANAC58         --------->MYB59<---------YAB1     ------- ->AtMYB61    <---------ARR14(2)   --------->ANAC58         --------->MYB111(1)----------->GT1<------   aatggtgaagcaattggatacgttttcttgatcaaagacgaaattcacaaaattcgctagattaggtgaattggattagaattgataaaaatctaataaa  7292400                         <---------O2                         --------->TGA1a                         --------->O2                         --------->bZIP60(1)                         <---------bZIP60(2)                         <---------bZIP60(1)                         <---------TGA1a                         <---------ANAC55(2)                                                  <------                         --------->ANAC55(2)                                       <---------ICU4                         <---------ANAC58                                          --------->ATHB12          --------->ATHB12                                            --------->YAB1   <-----------GT1  --------->YAB1         =================bZIP_DOF                   <---------YAB1<--------ATHB1 --------->ICU4          <---------ANAC58        <-----------------AGL1--------->AHL20(2)    <------- <---------YAB1   <---------MYB46(3)             ----------------->AGL1<---------AHL20(2)    <------- ------->YAB1    --------->ALFIN1              <------ZmHOX2a(1)   --------->YAB1  --------->ATHB51 ----->AHL20(2)<------MYB83----------->HVH21  <------MYB46(1)     <---------YAB1   -------->ATHB1 XXXXXXXXXXXXXXX>MIR418  ============================MYC_MYB    --------->YAB1    <---------YAB1 ---AHL20(2)   <------MYB46(1)               --------->MYB59    <---------ICU4    --------->ICU4 -->AHL20(2)  --------->MYB46(2)            <--------P          -------->HAHB4    <---------ATHB51 -->AHL20(1)  --------->MYB59  <----------DOF2<------MYB83     --------->ICU4  ------------>ATHB5 ---AHL20(1)  --------->MYB111(1)  XXXXXXXXXXXXXXXXXXXX>MIR391 <---------YAB1--------->ANAC46--------   ataataataaactgattaggtggtgagacgtgactttgcaagagaggtaggaccaaagatggaaaatgattataaaaatacacaattattgacaattttt  7292500                                                                                         --------->ZAT6                                                    --------->AHL20(2)                  <---------ZAT14                                         --------->AHL20(2)                             --------->ZAT14 ---AHL20(2)            <---------ARR11(3)          --------->YAB1              ------->TEIL --AHL20(2)             --------->ARR11(3)<---------AHL20(2)                   <---------AtLEC2 --AHL20(1)       ----------->GT1 --------->YAB1 --------->WOX13(1)           <-------TEIL ->AHL20(2)----------->GT1 <----------DOF2--------->AHL20(2)                 --------->AtLEC2--------   tttttttttttgaatgtaaattgataaatctttttttcataaaaaaaatttcaattaaaaaatacaatttctcttatacatgcatgtttctacactattc  7292600                                                                                <---------AHL20(1)                      ----------->GT1                                           --------->AHL20(1)                    ---------->DOF2        <---------ARR11(3)                   <---------AHL20(2)                 --------->AHL20(2)        <---------AHL20(1)                  --------->YAB1      --                --------->AHL20(2)         --------->AHL20(1)                 <---------YAB1<--------             --------->AHL20(2)            --------->ARR11(3)               <---------ZAT6  <--------            --------->AHL20(2)            --------->YAB1                  --------->YAB1 <-----------GT1      <----------DOF2--------->DAG2 ----------->RAV1(1)             --------->YAB1   --------->AHL20(2) ->ZAT14    <---------ATHB12       <----------ID1     --------->AtMYB61--------->YAB1<---------AHL20(2)   tctaccttctttcaataaataaaaaagtaaaaactatacaacaaaaatattcttcaccaaaactgaacatgaataatagtattatattttaatacttttt  7292700                                                                    --------->ANAC58                                                                    <---------TOE2(3)                                                                    --------->ANAC58  <---------AHL20(2)                                                             <------------CBF       <---------AHL20(2)                                                    --------->AHL20(2)             <---------AHL20(1)                                                    --------->AHL20(1)  --------->ANAC58                                                    <---------AHL20(2)  --------->ANAC58                                                    <---------AHL20(1)<------ZmHOX2a(1)   --------->HSFB2a(2)                      ----------->GT1    --------->YAB1--------->AHL20(1)          --------->ARR11(3)                   <----------DOF2       <--------HAHB4<---------AHL20(2)          --------->AHL20(2)                <---------AHL20(2)      <---------YAB1 --------->AHL20(2)          <---------ARR11(3)        =====================================HOX2a_HOX2a    --------->ATHB12       <---------AHL20(2)        <------ZmHOX2a(2)               <---------ATHB12 <------------CBF  ----------->RAV1(1)     -- ------->AHL20(2)  --------->TOE2(3)  ------>ZmHOX2a(1)<---------AHL20(1) <----------ID1  <---------HSFB2a(2) -DAG2 --------->ARR11(3)    <-----------GT1--------->AHL20(2)  --------->YAB1     --------->AHL20(1) --DOF2<---------ARR11(3)<---------AHL20(2) <---------AHL20(2)<---------WOX13(1)  --------->AHL20(2)-   tttatataagatcaacatttactttagttaatttccattcctataattaactaatattttattgattgataaggaagcaacaaaatatatttttagaaaa  7292800  Previous    Next  AGI:  At2g16790.1    Description:  shikimate kinase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO62220.1); contains InterPro domain Carbohydrate kinase, thermoresistant glucokinase; (InterPro:IPR006001); contains InterPro domain Shikimate kinase; (InterPro:IPR000623) Range:  from: 7291039    to: 7292319    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version