Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <-------TEIL                                                                   -------->HAHB4                                                                   --------->YAB1                                                                  <---------YAB1                                                               ------>ZmHOX2a(1)                  ----------->GT1                           ---------->ID1              <---------YAB1                               <-----------GT1           --------->AHL20(1)                         <---------AHL20(1)           --------->AHL20(2)        --------->AHL20(2)<---------AHL20(2)            --------->TOE2(3)    ----------->GT1           <---------TOE2(3)       --------->AHL20(2)             --------->YAB1 --------YAB1 <---------AHL20(2)   ----------->GT1    <---------AHL20(2)             --------->TOE1(3) ---ALFIN1 <---------AHL20(2)---------->DOF2       --------->YAB1 <---------ATHB12--------->YAB1   tctgatttgtaaattttttattgtaaaattttaaagtatgtaaatagggcctataattttttttcctaatgatacatgggcctataatcttaagaaactt  7274400                                                                  <---------YAB1                                                                 --------->AHL20(1)                                                                 <---------AHL20(1)                                                                 <---------AHL20(2)                                                                --------->AHL20(2)                                                               <---------YAB1                                                             --------->YAB1                                   --------->TOE2(3)  --------->ATHB12                        --------->YAB1               <---------YAB1                                <-          ------>ZmHOX2a(1)     <-----------GT1      --------->ICU4   <---------MYB46(3)     --------      <---------PCF2   <---------ATHB12        ------->TEIL <---------YAB1                  ---------   ttgaaatgggtcctataagttttcaataactattttacctcatcaaatgtatgttatgatttatgattatatttgttgaacatgatgctcatcacccatc  7274500                                                     <-----------GT1                 ------->MYC2                        --------->YAB1                 <-------MYC3                     --------->YAB1                 ------->MYC3                    <---------YAB1                 <-------MYC2              <---------ARR11(3)               ------->TEIL<---------YAB1  <---------ARR14(2)   <---------ANAC58        <---------TOE2(3)   ----------->GT1   <---------ANAC58       --------->YAB1   --------->ARR14(2)                             <----------DOF2 ---------DOF2<---------DOF5.7(2)          --------->ARR11(3)                             <---------DAG2 ->ANAC46    --------->ZAT14              <------ZmHOX2a(1)      <---------YAB1 <---------GLK1(2) >MYB46(3)  ----------->HVH21           <---------TOE2(3)    <----------DOF2  <---------YAB1   actttgctggtccagtgaacgtggacaataagattaagaacaaaggatattgtaataaccattctttatgttaagttattctgattctcagactttatca  7274600                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        =============================                                                                        <---------ANAC55(2)                                                                        --------->ANAC55(2)                                                                        --------->O2                                                                        ===================bZIP_DOF                                                          ------>MYB46(1)                                                 --------->TOE1(2)      <---------O2                                                --------->ANAC58        <---------TGA1a                                                <---------ANAC55(2)     --------->bZIP60(2)                                                --------->ANAC55(2)     =============================                                                --------->ANAC46        --------->TGA1a                                 <-----------GT1--------->ANAC58   --------->ANAC58                          ----------->GT1      ------->TEIL        --------->ANAC58      --------->YAB1                       --------->CCA1(2)       <-------TEIL <---------ALFIN1           --------->GLK1(2)                      --------->ARR11(1)   <---------------AtSPL3  --------->ANAC46--------->YAB1                      <---------ARR14(2)--------->ANAC58  ------>MYB83 <-------TEIL--------->HSFB2a(2)    <---------YAB1    --------->ARR11(3)--------->ANAC58--------->AtMYB61       <----------DOF2 -----   aatcccattatagaccgttcaatagatatggtatattacagtaagcatgtacgtaagaccatccacttcaaggcacgtctctctttcagaatcagaacaa  7274700                                        ----------->GT1                                        <------NtERF2                     <----------DOF2    <---------At4g35610                     <---------DAG2     --------->At4g35610                    --------->TOE2(3)  ------>NtERF2                    --------------->AGL15                    <---------------AGL15                   <-----------------AGL1                   <-----------------AGL2        <----------DOF2               <---------DEAR3(1)       ------>ZmHOX2a(2)              --------->ATERF1(2)     --------->ARR14(2)               <---------RAP2.6(2)            <----------DOF2     <---------ARR14(2)              --------->ATERF1(1)          --------->ARR11(3)     <---------ARR11(3)              --------->SPL7               <---------ARR11(3)      -----------     --------->ARR11(3)             ------>NtERF2             --------->At5g28300    <---------YAB1     <---------AGP1----------------->AGL1            <----------DOF2<---------ICU4 --------->YAB1     ------->TEIL  <-----------------AG<---------ATERF1(1)   --------->YAB1       <---------ATHB12 ==================bZIP_DOF   ---------->DOF2---------->DOF2 ----------->GT1      --------->ICU4 ======bZIP_DOF    ----------------->AG----------->GT1  ------------>CBF          <---------YAB1 ----->DOF2     <---------MYB52(1)  <---------ATERF1(1)<<<<<<<<<<<<<<<<<LFY   ------------>CBF    <--   aagaatggatctttctccattacctttatgggcaaagcgggcggctaaaaagagactttacaatggtaaatctttacttaaacaatgataaatgcaatag  7274800                                            <-------TEIL                                     <---------SPL7                                    <---------ANAC58                                    <---------ANAC58                                               <-    *TSS                       <---------ICU4                                                --------  <---------ATHB12           <-----------ARR10    <----------DOF2                       --------->MYB46(3) --------->ANAC58            <---------ARR11(3)--------->ANAC46                       --------->ANAC58 --------->ANAC58            --------->ARR11(3)--------->ANAC58                       --------->ANAC58 ->CBF   ------>ZmHOX2a(1)  <---------CCA1(2)  --------->ANAC58                       --------->ANAC46 -------ZAT18           --------->YAB1--------->MYB52(1)  --------->ANAC46 ------>ZmHOX2a(1)<--------   tgcaagcattcctgtttgcaagagaatcacaaatctttgcttacggttcacgctttaaaaacacaactctcattctccttctcttcacaaaccactcata  7274900                                                      ----------->RAV1(2)--------->ARR11(3)     <-----------GT1                              --------->At4g35610    --------->ARR14(2) --------AHL20(2)           <----------DOF2       <---------At4g35610    <---------ARR14(2) ->YAB1               <---------ZAT6          --------->ANAC46        <---------ANAC46            --- -ATHB12       <----------DOF2     --------->AHL20(2)-------->P     --------->MYB52(1)     <------ZmHOX2a(1)   ttttttttcacatacttctttgtagtgctactttccattatatcaaacactcagcaacctgatggcaacgagacggatattgaaagaattgaaggagttg  7275000                         <-----------RAV1(2)                        <---------ZAT14                        --------->ZAT14                        <---------ZAT18                       --------->ALFIN1                  --------->AtLEC2                                      --------->YAB1              <           ------>ZmHOX2a(1)        <------ZmHOX2a(2)         --------->ANAC58                <------           ================================HOX2a_HOX2a        --------->ANAC58            --------->ARR11(3)         ----------->RAV1(2)      <------ZmHOX2a(1)           --------->ANAC46            <---------ARR11(3) ------->DOF2<---------CCA1(2)---------->DOF2        <-----------GT1  ------->TEIL        <---------GLK1(2)   caaagagaccctcctgtatcatgcagtgcaggtaaaggatcacaatttgttcttaatacaatataagccatgtatcagaaattttttctaaagattttga  7275100                                             --------->CCA1(2)                                            <---------ARR11(3)            <---------PCF2                                            --------->ARR14(2)       --------->YAB1                                            <---------ARR14(2)      <---------YAB1                                            --------->ARR11(3)    --------->YAB1                                            --------->ARR11(1)    <---------------AGL15            <---------TOE1(2)         <------ZmHOX2a(1)           --------------->AGL15          ----    <----------DOF2                <-----------RAV1(2)           <-----------------AGL2        <----- -----------GT1            --------->MYB59----------->ARR10 --------->ANAC58              ------>ZmHOX2a(1) ---YAB1    <---------TOE2(2)    ----------->RAV1(1)        --------->ANAC58       ---------->DOF2 <-   tatttcctttctccttggtttgggatttttaggtccaacaggagaagatatgttccactggcaagctactataatgggtccgaatgaaagtccttactcc  7275200                                             <-----------GT1                                         <----------DOF2                                         ------>ZmHOX2a(1)                                      <---------YAB1         <---------ANAC58       ------>ZmHOX2a(1)                             <---------AHL20(2)         <---------ANAC58     ----------->RAV1(2)  ------>MYB46(1)           <---------AHL20(1) ----->LBD16         <---------ICU4  <-----------GT1    ----------->GT1      --------->AHL20(2) ----LBD16          <-------TEIL--------->ICU4     ------>MYB83              <---------AHL20(2) --------AtMYB61  --------->YAB1<---------YAB1<-----------GT1    <----------DOF2         <---------AHL20(2)   ggaggtgttttccttgtcaatattcatttccctcctgattatccttttaaacctcccaaggtaacaactttctcaacaatttttttgttttttaatctac  7275300  Previous    Next  AGI:  At2g16740.1    Description:  UBC29 (UBIQUITIN-CONJUGATING ENZYME 29); ubiquitin-protein ligase. similar to UBC10 (UBIQUITIN-CONJUGATING ENZYME 10), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G53300.2); similar to UBC10 (UBIQUITIN-CONJUGATING ENZYME 10), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G53300.1); similar to Os04g0667800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054191.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ49339.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 7274804    to: 7276024    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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