Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->MYB55(2)                     --------->MYB52(2)                     <---------MYB46(3)                               --------->HSFB2a(2)                    <--------P <-----------GT1                 --------->ARR11(3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <---------ARR11(3)    --------->AHL20(2)    <---------YAB1                    <---------AHL20(2)    <---------AHL20(2)<-------GAMYB             --------->AHL20(2)    <---------HSFB2a(2)         <--   --------->AHL20(2)--------->MYB111(1)    <---------ICU4  --------->AHL20(2)             --------->AHL20(2)   <---------AHL20(2)--------->MYB111(2)   <---------ATHB12--------->YAB1                ----------->GT1 ------>GT1      <---------AtMYB61    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <----------DOF2      ---   gtaaatttttttaaaagttttggtagttgttataaacccttgtaaatcattttaaaacctattaaaatctttctagagtctttaaaaacatatgtaaata  7254800                            <---------ICU4                     <-----------GT1                     --         <----------DOF2   <---------ATHB12  <---------YAB1   xxxxxxxxxxxxxxxx>smallRNA(i)<------ZmHOX2a(1)   <-----------GT1--------->TOE2(3)     <----------DOF2      --------->CCA1(2)        ---------->DOF2 --------DOF2 <-----------GT1       <-----------GT1         --------->ARR11(3)   xxxxxxxxxxxxxxxxxxxx ------>TOE2(3)<-----------GT1  --------->AHL20(2)          <---------ARR11(3) xxxxxxxxxxxxxxxxxxxxxx   ctttaaaacctctttttaaacctttgtaaatcattttaaaaccttttacaataggtttacaagatttacaagagtttttaagagttttaaaaggatttac  7254900             <-----------GT1          <--------HAHB4          -------->ATHB1          <---------ICU4          --------->ATHB51          --------->AHL20(2)                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)          <---------AHL20(2)                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         --------->ICU4       <---------AHL20(2)    --------->AtMYB61         <---------ATHB12    --------->YAB1         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------ATHB51   <---------YAB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------ARR11(3)      <---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->ARR11(3)      --------->AHL20(2) ---------->DOF2                          <-----------RAV1(1) <---------GLK1(2)       <---------YAB1 --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <----- --------->ARR10      <----------DOF2   --------->TOE2(3)                         <---------AHL20(2) xxx>smallRNA(si3)  ---------->ID1      --------->TOE1(3)                      --------->ARR11(3) >smallRNA(si3) <----------DOF2       --------->GLK1(2)--------->AtMYB61       <---------ARR11(3)   aaagattttcaattatttctttttctttttattataagggaatcttaaaagagaccaccattgctcatgctcttagttttagattttatggtgctatata  7255000                                                                                                -----                                                                                           ----------                                                       <---------AHL20(2)                 --------->ANAC58                                                      <---------AHL20(1)                  --------->ANAC58                                                      --------->AHL20(1)                  --------->ANAC46                                   <-----------GT1    <---------AHL20(2)                 <---------LBD16                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                <---------MYB52(1)                     <-----------GT1                  --------->AHL20(2)        --------->LBD16 <----           --------->YAB1<----------DOF2    <---------YAB1                     <---------ANAC55(2)          <---------YAB1<---------DAG2    --------->AHL20(2)     <---------MYB52(1)<-----------------AGL1 ----AHL20(2)     <---------MYB46(3)<---------At5g28300--------->AHL20(2)      --------->ANAC55(2)   cttgaatagtttatgaaaattggttaccttttgtaattcaccgattatttttaaaatttatttgtctgttttttgtttgctccgtaacttatacggcaaa  7255100                                             <---------AHL20(2)                                             --------->ARR11(3)                                             --------->AHL20(1)                                             <---------AHL20(1)                                   >>>                                          --------->AHL20(2)                                    <----                                          --------->YAB1                                       <-----          <---------AHL20(2)            --------->AHL20(2)       <---------O2              --------->AHL20(2)          --------->AHL20(2)            --------->AHL20(1)  --------->ANAC46               <--------- ---->ARR14(2)                       <---------AHL20(2)   <-----------GT1                  <---------AHL20(2) ->GT1----------->GT1    --------->YAB1--------->YAB1 ----------->TBP ------------>CBF   <-----------TBP -----ARR14(2)       --------->ZAT6  --------->AHL20(2) <---------AHL20(2)            <---------AHL20(1)   ttcgaaaatagtttaaatattcaacactgatagtactaaaaaaataatattttggtatataaacgagacgagtccaatttagttttagtatatttatata  7255200                <---------RVE1(1)     <---------YAB1     <---------AHL20(2)     --------->AHL20(2)                                                                        <-----    --------->AHL20(2)                                                                       <-------    --------->AHL20(1)          --------->ANAC58                                          --------->O2    <---------AHL20(1)          --------->ANAC58                                          <---------O2   --------->YAB1   *TSS    <----------DOF2                                               --------->TGA1a >>>>>>RAP2.2   <---------CCA1(1)                                                  --------->DAG2 -----ARR11(3) <---------ARR14(2)                                                 ---------->DOF2 ----CCA1(2)   <---------ARR11(3)                                                 ==================bZIP_DOF --TBP         --------->ARR11(3)   ---------->DOF2                      ----------->GT1  <---------TGA1a   tctaaatataatttgaagatatttgtatttctttaagcaaaagaaaacagacttgttcattttccaacttcggtttagaaaaaaaaaaggagacgtcgtc  7255300                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                               --------->ARR14(2)             <------                                                               <---------GLK1(2)              <------                                                               <---------ARR14(2)             <------                                                         <---------GLK1(2)                    <------                                                         <---------ARR14(2)                  --------                            <---------ICU4               --------->ARR14(2)    <---------GLK1(2)<----      <---------GLK1(2) --------->AHL20(2)               --------->ARR11(1)   <---------HSFC1(2)----- -NtERF2  <---------YAB1<---------AHL20(2)            <---------TOE1(2)       --------->HSFC1(2)<---- --DEAR3(1)         <---------YAB1    <---------CCA1(2)<---------ATHB12    ---------->DOF2   <-------   gtcttctagcttctgattaagtctgataaattatgcccctaaatctgtaattctccaaggattcggattcgatcgatgaaagcttctcaaattttggcgg  7255400      <---------ANAC46     <------NtERF2   <---------DEAR3(1)   --------->DEAR3(1)  --------->At4g35610  <---------At4g35610 -----NtERF2 --------ZAT14 --------ZAT2 ------->At4g35610 --------At4g35610 ---->ATERF1(1) ---->At4g35610 -----At4g35610 ---GAMYB ----MYB46(3) >NtERF2 ----ATERF1(1) ----ERF1 ----RRTF1(1) ----RAP2.3(1) ---RRTF1(2) ---RRTF1(3)                                            --------->HSFC1(2) -->ATERF1(2)                                           --------->ZAT2 ---ANAC46                                              <---------HSFC1(2) ---DEAR3(1)                                            <---------ZAT2 ---RAP2.3(2)                     --------->ANAC58      --------->HSFB2a(1) ---RAP2.6(2)                     --------->ANAC58      <---------At4g35610 ---RAP2.3(3)                 --------->ANAC58          --------->At4g35610 ---DREB2C(2)               <------ZmHOX2a(1)    ------->GAMYB ---ATERF1(2)        <---------ANAC46           --------->MYB46(3) ->RAP2.6(3)     --------->DEAR3(2)--------->ICU4<---------SPL7                        ------->GAMYB -----ZAT2    <------MYB83<---------TOE1(3)--------->TOE2(3)                           ============== ---->ZAT2    <------MYB46(1) --------->ANAC58--------->MYB52(1)          <---------ICU4  <---------- --NtERF2   <--------P<----------DOF2   <-----------GT1------->TEIL   <-------TEIL  ----------->RAV1(1) --LBD16   <-------GAMYB  <---------TOE2(3)--------->TOE1(3) <----------DOF2<---------CCA1(2)      <-   ctgcagcggcgagggttggaccggcgttaaggaagcaagtattaaccttaacggacgaagctgcttctagggttcatcatctcttgcaacagcgtcaaaa  7255500                                               <---------ZAT18                                               --------->ZAT14                                               <---------ZAT14                                               --------->SPL7                                <------NtERF2<---------SPL7                          <-------PIF5      <---------ANAC58                          ------->PIF5      <---------ANAC46                         <---------TGA1a    <---------ANAC58               --------->HSFB2a(2)                         ==========================bZIP_DOF                <---------HSFB2a(2)      <                        <-------TEIL       ---------->ID1       ----------->GT1                    <-                    <---------TOE1(3)   <----------DOF2         --------->LBD16                 -----                    <---------TOE2(3)  <---------ANAC58       <---------LBD16     ----------->GT1---- ==================================MYC_MYB --------------->AtSPL8         <---------LBD16       ----- -HVH21            ================bZIP_DOF--------------->AtSPL3--------->At5g28300          <------ --------DAG2      ---------->DOF2     <---------ANAC58     --------->ANAC46--------->LBD16  <-------   accttttctccgattaggcgttaaggctcgtggctgcaacggcttgtcgtacactctcaattacgccggtaaaacttctgggaacggtttcaatttcacc  7255600                                                                                               <-----                                                                                              <------                                                                                              <------    <---------YAB1                                                                            <------ ----------DOF2                                                                           --------->At4g35610 ---------DOF2                                                                            <---------At4g35610 ---->DEAR3(1)                                         <---------TOE1(3)                 <-----------RAV1(1) -->NtERF2                 <---------ANAC58            <---------TOE2(3)             ------>ZmHOX2a(2) ---->DREB2C(2)            <---------ANAC58        <---------YAB1                    ================ ---At5g28300              <---------ANAC46      <---------AHL20(2)                --------->ARR11(3) ----GT1                  <---------MYB46(3)    <---------YAB1   <-------GAMYB     <---------ARR11(3)   gcctttattgttgtttctctggtttttttgggtggaatcaagtttcaatttttattttaggtttttgggttgagttttgaattttgatcttgtgctgcgt  7255700  Previous    Next  AGI:  At2g16710.1    Description:  hesB-like domain-containing protein. Identical to Iron-sulfur assembly protein IscA-like 1, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q8LBM4;GB:Q9SLE6); similar to iron-sulfur cluster assembly complex protein, putative [Arabidopsis thaliana] (TAIR:AT2G36260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15918.1); contains InterPro domain HesB/YadR/YfhF; (InterPro:IPR016092); contains InterPro domain HesB/YadR/YfhF-like (InterPro:IPR000361) Range:  from: 7255220    to: 7257373    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version