Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           ============                                                                                <---------YAB1                                                                                --------->ICU4                                                                              --------->YAB1       <-                                                                              <---------ICU4       --                                                                             <---------YAB1        <-                                                                           --------->YAB1<---------ANAC46                                                                     --------->ANAC58    --------->TGA1a                                                                     --------->ANAC58    <---------bZIP60(1)                                                                    --------->RAP2.3(3)  <---------TGA1a                    <-------TEIL                                   <---------ALFIN1      <---------O2         --------->ARR14(2)                                       --------->ZAT18        --------->O2         <---------ARR14(2)                                       <---------ZAT18     ----------->TGA1 -------GT1  ------>ZmHOX2a(1)        <----------DOF2            --------->ANAC58   --------->YAB1 -- -YAB1  <---------CCA1(2)   <----------DOF2                      --------->ANAC58<---------ICU4  <---   tctcttcttcgtatcctatatatacatatactttgattttctttgtaatcccataatgtgtttagtcgcgcaccctataatcataatggtgacgagaggt  7251300          ----------->GT1      --------->DAG2                              --------->MYB52(1)     ---------->DOF2                             <---------YAB1 ===============bZIP_DOF                       --------->YAB1 --------HSFB2a(2)        <------NtERF2       <------ZmHOX2a(2) ------->HSFB2a(2)       ------>NtERF2       --------->ARR11(3)            ---------->DOF2 --------HSFC1(1)       --------->DEAR3(1)   <---------ARR11(3)      <<<<<<<<<GATA-1            <---- ------->HSFC1(1)      --------->DEAR3(2)---------->DOF2          <---------AHL20(2)          ------- ----TEIL--------->ALFIN1<---------RAP2.6(3)--------->YAB1       --------->AHL20(2)--------->ZAT6   tcgagaaaaaagtggtgaagagagtgccgacgagaatgtttttcaaagatcataactgaataactaattttatctataaaagaaaacactaatctattat  7251400                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                -----                                                                                     <---------AHL20(1)                                                                         <---------RVE1(1)      -----                                                                   --------->TOE2(3) --------->AHL20(1)                                                              <---------AHL20(2)    --------->AHL20(2)                                                       --------->ANAC58  <---------CCA1(1)      <----        --------->ATHB12                               --------->ANAC58 <---------ARR11(3)     ------       <---------ATHB12                                --------->ANAC46 --------->ARR11(3)<---------AHL20(2) -----YAB1<--------P <----------DOF2       ------>ZmHOX2a(2) --------->AHL20(2) --------->AHL20(2) -- -->YAB1<---------MYB46(3)     --------->YAB1         --------->SPL7<---------MYB52(1)--------->AHL20(2)   gttttttcaatggttgatcaattcttttgcaaatgaaaatgttgatccaaattccatacgcaaataaatcgttagatatttttaaaatatatataaaaaa  7251500       <---------CCA1(1)       <---------RVE1(1)      --------->ARR11(3)      <---------ARR11(3) -------->ATHB12 ------->ATHB1                                                    ------>NtERF2 -------->ATHB51                                                  <---------RAP2.6(3) ---------ICU4                             --------->ZAT14       --------->DEAR3(1) --------YAB1                         --------->ZAT18  --------->TOE2(3) ------->AHL20(1)                     <---------ZAT18 <---------bZIP60(1)            <---------AHL20(1) ------->AHL20(2)                <---------YAB1       ----------->GT1                <---------ARR11(3) --------AHL20(2)              --------->ATHB12    ----------->HVH21                 --------->AHL20(1) ---->AHL20(1)                --------->AHL20(2)   ----------->TGA1<------NtERF2     --------->ARR11(3) ---->AHL20(2)              --------->ARR11(3)    --------->At5g28300        <----------ID1 -----AHL20(2)       <----------ID1   <---------ZAT14 <---------ANAC46    ---------->DOF2 --->AHL20(2)      ---------->DOF2    --------->ZAT14<-----------------------TaNAC69(2) ------->ICU4 --------->YAB1<---------ARR11(3)--------->MYB52(1)--------->DEAR3(2)  --------->YAB1   aattattagatatttatcagaaaaagacaagatttattagtgcagaacacacggtgacgttaatatgccgacgagaaaaagaacaaaaatattcgtctct  7251600                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                          ---------->DOF2                                                                         <---------AHL20(2)                                                                       ----------->TBP                                                                     --------->AHL20(2)                                                                   <-----------TBP                  X                                ----------->GT1                  <----------DOF2          <----------    --------->DAG2           --------->YAB1  ------>ZmHOX2a(2)   <---------DAG2    ---------->DOF2 XX   ---------->DOF2     ----------->GT1   <---------ZAT6          --------------->AGL15    *TSS    XXX   aacaaaaaagtttacaagggtgagtttgtaataagagtaaatagtgatcgcatttgtataggcataactttttatataaagacctcaaagtcttaccatt  7251700                   ------>NtERF2                  --------->ANAC46                  --------->ANAC58                <---------ALFIN1               <---------REM1(2)           --------->ARR11(3)           <---------ARR11(3)        --------->DAG2  ----------->GT1 --------->ANAC58 XXXXXXXXXXXXXXXXXXX>MIR319A/B      ---------->DOF2         ---------->DOF2              --------->At4g35610 -GT1  ---------->DOF2         ----------->GT1            --------->ARR11(3)             <---------At4g35610 XXXXXXXXXXXXXXXXXX>MIR159B    <----------ID1         ---------->DOF2                <----------DOF2 XXXXXXXXXXXXXXXXX>MIR159A   ---------->DOF2     >>>>>>>>>TBF1                  <-----------GT1   tgaacagaaaaaagctctccacgcctaaaaaaaaagaaaaaagagacagaagaagaaaaagataaagaagaatcaaactttgtaaccctttagcagcaat  7251800                                                                                                  ---                                                                                                 ----                                                                                             --------                                                                                            ---------                                                               <----------DOF2              ---------                                                              ------>ZmHOX2a(2)             <--------                                                            <---------ARR11(3)            <----------                                                            --------->ARR11(3)      --------->ATHB12<                                                         ------>ZmHOX2a(2)         --------->ICU4----                                                        <---------At4g35610        <---------YAB1<---                                                       <---------ARR11(3)        -------->HAHB4  ----                --------->At5g28300                    <---------AGP1            <---------ICU4------               ----------->GT1                   --------->GLK1(2)               --------->YAB1<-----      <----------DOF2                           <---------GLK1(2)               <---------ATHB12<----     <---------ANAC58                           <---------ARR11(3)              --------->ICU4-------     <---------ANAC58                           --------->ARR11(3)             <---------TOE2(3)-----   ggcgatggctttcaagatggtaaattcaaatttgtttttctacgtttaaagattcttgatctgatctttaaacaaatagctaatgatgattcgcaggcga  7251900        <---------ANAC58        <---------ANAC55(2)       <-------TEIL --->NtERF2 ----->O2 ->ATERF1(1) >ANAC58<---------ANAC46--------->ZAT18 >ANAC58<---------ANAC55(1) -ATERF1(1)             <---------ZAT14 -RAV1(2)               --------->ZAT14                                                           --- ---------ANAC46      <---------------AtSPL3                                                      <-- ----->DEAR3(1)       <---------------AtSPL8                                                      --- ------O2   ----------->HVH21                                                                     --- ------->HVH21       <---------ANAC46                                                             <-- >NtERF2<---------ANAC58<---------SPL7                                                            --- ----ATERF1(1)     xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 <-------TEIL                 --- --NtERF2 --------->ALFIN1                                          --------->CCA1(2)         <------ ---->HVH21<-----------HVH21                                 <-------TEIL           <------ZmHOX2a(2) ---->ATERF1(1)<---------ANAC46 <-------TEIL            ---------->DOF2            <---------ARR11(3)   cgacggggatgcgtgtgacggatgagtgtacgagttcattcatggacatgaaatggaagaaagttcatagatacatcgttttcaagatcgaagagaagtc  7252000                                      --------->At4g35610                                     --------->ANAC58                                   ---------->DOF2                              --------->DEAR3(1)                              <---------DEAR3(1)                             <------NtERF2                             --------->ATERF1(1)                            <---------RAP2.6(1)                            <---------ATERF1(1)                            <---------RAP2.3(1)                            <---------RRTF1(1)                            ------>NtERF2                           --------->RAP2.3(2)                           <---------DEAR3(1)                          --------->RAP2.6(1)                          --------->RRTF1(1)                          --------->ATERF1(1)                          <---------ABI4(2)                          <------NtERF2                          --------->DEAR4(2)                          --------->ORA47(2)                          --------->RAP2.3(1)                         ------>NtERF2<---------At4g35610                         <---------ATERF1(1)                         <---------RAP2.6(1)                         <---------ERF1                         <---------RRTF1(1)                         <---------DEAR4(2)                         <---------DEAR3(2)                         <---------ORA47(2)                         --------->ABI4(2)                         <---------RAP2.3(1)                        <---------RAP2.3(3)                        <---------DEAR3(1)                        <---------RAP2.3(2)                        <---------RRTF1(2)                        <---------RRTF1(3)                        <---------ATERF1(2)                        --------->ATERF1(2)                     <---------LBD16                        --------->DEAR3(1)                  <----------DOF2                       <---------ABI4(1)                 --------->GLK1(2)                       --------->At4g35610              <---------ARR14(2)                       --------->ATERF1(1)              --------->ARR14(2)                       <------NtERF2 --------->ANAC58   <---------ARR11(3)         --------->DEAR3(1)--------->DEAR3(1)           --------->ARR11(3)       <---------At5g28300--------->ERF1                <---------GLK1(2)  --------->DAG2       <---------At4g35610             --------->HSFC1(2) ---------->DOF2      <---------ORA47(2)               --------->HSFB2a(1) ------>ANAC55(2)     <---------ATERF1(1)              <---------HSFC1(2)          <---------ZAT14 -------ANAC55(2)     <---------RAP2.3(1)         --------->HSFB2a(2)              --------->ZAT14 ------>ANAC58       <---------DREB2C(2)         ------>ZmHOX2a(2)       --------->ATHB12 ------>O2           <---------RAP2.3(3)        <------ZmHOX2a(2)       <---------YAB1 -------ANAC46       <---------DEAR3(1)  -------->P    <---------HSFB2a(1) <---------WOX13(1) ------>ANAC58  ---------->DOF2  ----------->HVH21<---------HSFB2a(2)<---------MYB46(3) ------>ANAC55(1)--------->DAG2--------->LBD16 <---------ARR11(3)   --------->ALFIN1 -----HVH21 <---------ETT(2)<---------ERF1     --------->ARR11(3)  <---------MYB52(1)      <---------   acgtaaagtcaccgtcgataaagtcggcggcgccggtgaaagctaccacgatctcgaagattctttaccggtggatgattgtcgctacgctgtctttgat  7252100                                                 <---------ANAC58                                                 <---------ANAC58                                     <------ZmHOX2a(2)                                    --------->ARR11(3)                                    <---------ARR11(3)                                    --------->AGP1                                    <---------ARR14(3)                                    --------->ARR14(3)                         ------>NtERF2           <---------AtLEC2                     ------->GAMYB  --------->ARR14(2)              <---------ETT(2)      <---------ARR14(2)           --------->DEAR3(1)       <-----------ARR10         <---------At5g28300      ----------->ARR10   <--------P         <-----------GT1        -----        <-----------GT1  --------->LBD16    --------->ATHB12         <----------DOF2            -----   <----------DOF2  --------->MYB46(3)------>ZmHOX2a(2)             --------->TOE2(3)           ----- -DOF2<-----------HVH21 --------->RAP2.6(2) <---------ICU4       <-----------GT1             <-------   ttcgactttgtcaccgtcgataactgccgcaagagcaagatcttcttcattgcatggttagtccaatttacctttatacccttcttaattctagttgcaa  7252200  Previous    Next  AGI:  At2g16700.1    Description:  ADF5 (ACTIN DEPOLYMERIZING FACTOR 5); actin binding. Identical to Actin-depolymerizing factor 5 (ADF5) [Arabidopsis Thaliana] (GB:Q9ZNT3;GB:Q9SLE7); similar to actin binding [Arabidopsis thaliana] (TAIR:AT4G34970.1); similar to unknown [Populus trichocarpa] (GB:ABK95505.1); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) Range:  from: 7251690    to: 7252823    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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