Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <----------DOF2              ===============HOX2a_HOX2a              ------>ZmHOX2a(2)             ================HOX2a_HOX2a             <------ZmHOX2a(2)            <---------ARR11(3)            --------->ARR11(3)            <---------ARR14(2)                                                                      <            --------->AGP1                                                                          <            --------->ARR14(2)                                                                      <            --------->ARR14(3)                                                                    ---            <---------AGP1                                                                      <----            <-----------ARR10    --------->AHL20(2)                                             -----     --------->ANAC46          --------->ANAC58                                                 <----   <---------ALFIN1            ----------->GT1                         --------->ZAT14          <----  <---------ZAT14     ------>ZmHOX2a(1)                      <---------AtLEC2    --------->AHL20(2)<-  --------->ZAT14    --------->TOE1(3)        --------->ARR11(3)       <---------ZAT18          <---- ------>ZmHOX2a(1)   --------->TOE2(3)        <---------ARR11(3)      --------->ALFIN1 ----------->GT1 ------DOF2 <---------ARR14(3) --------->ANAC58         --------->GLK1(2)    ----------->GT1   <-----   ttcctacactgcaagatctttctccttaaaatcaagaaaatagccaaacatctccaagaatttgcaagaacagtggacgatgttaaaatttgtaaaatac  7215900                                                   <---------ANAC58                                                   <---------ANAC46          ----------->GT1                     --------->ALFIN1          <---------ANAC58                   <-------MYC2          <---------ANAC46                   ------->MYC2      <------MYB83                           <-------MYC3      <------MYB46(1)                        ------->MYC3    <--------P                              <---------TGA1a    ==================================================MYC_MYB   <---------MYB52(1)                       --------->TGA1a ---------ANAC46                            <---------O2 ---------ANAC58                            --------->O2 ---------ANAC58                            <---------ANAC46 ------>ALFIN1                              --------->ANAC55(2) -----ANAC58                            <-----------HVH21                                     ------- ---->ANAC55(2)                        --------->ANAC46                                 --------->ANAC46 -----ANAC55(1)                      <---------ALFIN1--------->ALFIN1                --------->ANAC58 -----ANAC58                       <-----------GT1 <---------ANAC58                  --------->ANAC58 --------LBD16                <---------AHL20(2) <---------ANAC46                 --------->At4g35610 -----ANAC55(2)           <----------DOF2   <---------ANAC55(2)                   --------->ZAT2   <- --TEIL   <---------ANAC58============================bZIP_DOF                <-----------GT1 -------   gtgcgggtagggtcgtgtaaactttcttcttttttattcacacttcacgtgttgtgtgtggaactatgttcacattagtttaacagctcgacacaaccat  7216000                                          --------->TOE2(3)                               -----------                           <---------ANAC58                                --------->ARR11(3)                           <---------ANAC46                                <---------AHL20(1)                           <---------ANAC58                                <---------ARR11(3)                        <---------WOX13(1)--------->TOE1(3)                <---------AHL20(2)     ---                       <---------ANAC58  <---------HSFC1(2)                --------->AHL20(2)    <---     ---------->DOF2   <---------ANAC58  <---------HSFB2a(1)            --------->AHL20(2)--------->ANAC58  --------->AtLEC2    --------->ATHB12   --------->HSFC1(2)           --------->AHL20(2)  --------->ANAC58 -->YAB1             <---------YAB1    <---------GLK1(2)--------->AHL20(2)--------->AHL20(2)     ---- ------TEIL        <---------ICU4      --------->ARR14(2)     <----------ID1<---------AHL20(2)   <--- -->TOE2(3)     --------->YAB1         <---------ARR14(2)--------->AHL20(2)--------->AHL20(1)    ----   attcatacaaagtcttgataatattgattgcgttcgagccagaaccttcaaaactccattaaaaaaaacaaaaaaaatatatttgaaggaacaagaaaat  7216100       --------->ZAT14       <---------At4g35610                                                            <---------GLK1(2)       --------->ZAT2                                                              --------->ANAC58       <---------ZAT2                                                              --------->ANAC58       <---------ZAT14               --------->ZAT18                              --------->SPL1(2)       --------->At4g35610<---------YAB1                                      <---------------AtSPL3 >GT1---------->CDC5      <------ZmHOX2a(2)                           <---------YAB1  --------->ARR14(2) ------>ATHB12            --------->ICU4                           <---------YAB1 --------->SPL7 ------AHL20(2)          <---------ARR11(3)                    --------->TOE2(3) --------->SPL1(1)<-- ----->AHL20(2)          --------->ARR11(3)            --------->At4g35610   <------------------SPL14 ------AHL20(1)         --------->GLK1(1)   <---------------AGL15 --------->AHL20(2)  <---------ARR14(2) ----->AHL20(1)         <---------GLK1(1)  <-----------------AGL3 --------->YAB1<---------SPL7<------   ttattgctcagcacagaaggttagggagatcattaagagtccattacaaaatttggaggctgaaacattaatattcttgactcgtacggattctctcatg  7216200                                                                           <---------ARR14(2)                                              <---------AHL20(2)          <------ZmHOX2a(1)                                              --------->AHL20(2)    <------MYB83                                             --------->AHL20(2)     <------MYB46(1)                                         ------------>CBF         <--------P                                        --------->TOE2(3)       --------->MYB55(2)                                        --------->TOE1(3)       --------->ATHB12                                      -------->P<---------TOE2(3)<-------GAMYB             <---------                                     ------->GAMYB<---------ICU4<---------MYB46(3)    <-----------GT1     --------->ANAC46               --------->MYB46(3)    --------->At4g35610     <---------AHL20(2) -----TEIL                  <----------DOF2  <---------ATHB12  <---------YAB1 <---------DAG2        - ---TOE1(2)       <---------YAB1    <---------MYB111(2)   <---------At4g35610 <----------DOF2  <-----   ttcatacacataaactagttatgtttttgtctttgtcaacaacctcaattaatatttagcagttgatggttggagaggaactttttatttactcttttta  7216300                                                                               --------->YAB1                                                                              <---------YAB1                                            <---------ANAC46                --------->YAB1       <-----------TBP                      <---------ANAC58          ------>ZmHOX2a(2)     --------------->AGL15                  <---------ANAC58         <------ZmHOX2a(2)     <---------DAG2                    --------->ATHB12             --------->ARR14(2) -DOF2<----------DOF2  <-----------GT1 <---------ICU4               ------->TEIL  --------->YAB1 -------->At4g35610  *TSS            <----------DOF2 --------->At4g35610   <---------ATHB12       --- ------GT1---------->DOF2       <<<<<<<<<TBF1   <---------CCA1(2)   <---------ARR14(2)        <------   tcttctgccttttaaagactacttgtttctcttcttcttctttattgcttatagcttctgagcatcaatggatccaaatcataataatcttctcatcttt  7216400                                          <----------TaMYB80                                          --------->GLK1(1)                                          --------->CCA1(2)                                         ---------->TaMYB80                                         <---------ARR14(2)                                       --------->LBD16                                   <-----------GT1                                  ----------->HVH21                                <---------REM1(1)                                                 <--                             <---------ATHB12      <-----------HVH21                             ----                          --------->AtMYB61        --------->At5g28300                           ====                         --------->MYB46(3) --------->ANAC58                                    <----                        ------>NtERF2<---------LBD16                                            =====                        <<<<<<<<<<<<<<<<<LFY--------->ANAC58                                   ------   <----------DOF2     --------->RAP2.6(2)<---------GLK1(1)                                    <-----  <---------DAG2      --------->MYB46(3) --------->ARR14(2)                                    ------ ------->ID1    --------->At4g35610--------->ARR14(2)                  ----------->HVH21      <------ ----DOF2       <---------At4g35610<---------ARR14(2)        <---------DEAR3(1)               -------   gtagccttttttgttctctgcttagccaccaatggtgtaaccggatatgccacggtcacaggctcggtgttttgtgaccaatgcaaggatggagagagat  7216500                             -------->HAHB4                             <--------ATHB1                             <---------ICU4          <-----------GT1   <---------ATHB51 --------DOF2               --------->ICU4 -->ZmHOX2a(2)              <---------YAB1 ===================HOX2a_HOX2a --ZmHOX2a(2)             --------->YAB1                                                 <-----------RAV1(1) ===================HOX2a_HOX2a                                                   =================== --->ARR11(3)             <---------ICU4                             ------>ZmHOX2a(1)   <---------MYB46(3) ----ARR11(3)            <---------YAB1                             --------->TOE2(3)--------->ATHB12 --->AGP1<-----------GT1 --------->ICU4                    <---------ANAC58       <-------GAMYB  <--- ---GLK1(1)         ----------->GT1                      <---------YAB1          <---------MYB46(3) -->GLK1(1)  ------>ZmHOX2a(1)             <-----------GT1 <---------ANAC58      --------->MYB52(2)   ctttgtttgattttcctgtctctggtaataataattccaacatttttacattgctgtctatgcttgtgttccttaagatgtgtttgttgatttgttgcag  7216600                      --------->ICU4                    --------->At4g35610                    <---------At4g35610                  ------->MYC4                  ------->MYC3                  <-------MYC3                                                    --------->ANAC55(2)               <---------TGA1a                                                  --------->GLK1(1)               --------->O2                                                     --------->CCA1(2)               --------->TGA1a                                                 --------->ARR14(2)           <-----------HVH21                                                   <---------ARR14(2)          <---------ZAT6                                                      <------ZmHOX2a(1)   --------->ICU4 ------->MYC2                                         <---------ANAC58   <---------YAB1 <-------MYC2                                         <---------ANAC58 --------->YAB1<---------O2                                            <---------ANAC46            -- ========================MYC_MYB                                   <---------WOX13(1)       --------- ---ZmHOX2a(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              --------->ATHB12 <---------ANAC55(2)   gaatcaagattagtgtcacatgtgctgatgaaaatggacaggtctatatgtcaagagaagagactactaattggcttggaggatatgtaatgagatttga  7216700             --------->ANAC46          ------>ZmHOX2a(2)        <---------AGP1        <---------ARR14(2)        --------->ARR14(2)        <---------ARR11(3)        <---------ARR11(1)        <-----------ARR10       <---------CCA1(2)                                                                <---------ZAT14       <---------ARR14(1)                                                         <---------At4g35610      --------->LBD16                                                        <---------ANAC58    <---------LBD16     <---------YAB1                                       <---------ANAC58 <------   --------->MYB52(1)<---------MYB52(1)                             --------->At4g35610 --------->ZAT14  <---------ALFIN1<------------AtMYB77                           --------->ZAT2 <-----------RAV1(2) --------->HVH21--------->MYB52(1)                               --------->At4g35610   --------->AtLEC2 >CCA1(2)<------ZmHOX2a(2)                                       <---------At4g35610   ------>ZmHOX2a(1)   tgggacaccggatctaagtaactgttatgctcaagtttcagacaatggagttcaacaagacccaagtagctgcagcattgcttcaggtcctgcacagaaa  7216800  Previous    Next  AGI:  At2g16630.1    Description:  proline-rich family protein. similar to unknown [Populus trichocarpa] (GB:ABK95343.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47340.1); contains domain PRICHEXTENSN (PR01217) Range:  from: 7216321    to: 7218119    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version