Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->TOE2(3)            --------->YAB1            --------->ATHB12            <---------ICU4            <--------HAHB4                                            <---------TOE2(3)           <---------ATHB12                                           <---------TOE1(2)           <---------YAB1                                             <---------TOE2(2) -------->DAG2        <---------TOE2(3)                    <---------ANAC46 -------->DOF2       <-----------GT1                       ----------->GT1 --->DOF2  --------->ICU4                              <---------AHL20(2) ->GT1   --------->YAB1      <---------TOE2(3)        --------->AHL20(2)          <---------YAB1   gaaaagttgaataatcattagattaacaatataggttgaaattttgtatttggaaattatatcgtataatccaaggtttaaaatatgagagttgtgtcat  7207500                                             <--------HAHB4                                             --------->ATHB51                                             -------->ATHB1                            <---------GLK1(1)             <---------------AGL15           <---------AHL20(2)         --------------->AtSPL8        --------->YAB1                       --------->AHL20(2)         <---------------AtSPL8       <---------YAB1        ------>ZmHOX2a(1)          <---------MYB46(3)  ------->TEIL     --------->YAB1  <---------At4g35610    --------->ICU4<---------ANAC46  <-------TEIL    <---------YAB1  ------->TEIL            <---------ATHB51          <-------TEIL     --------->GLK1(1)   tagactattatgatgctctatgaagctaatcctctcagtctctacaattatttaagagtggtttgggctaagtacatgtacattatcggaactcttattt  7207600                                                            <---------ATHB12                                                          --------->WOX13(1)                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                        <---------AHL20(2)                                                        --------->AHL20(2)                     ------                                                   --------->LBD16                        -----------                                                  ----------->GT1                <---------ARR11(3)                                                  --------->ANAC58               --------->ARR11(3)                                                  --------->ANAC58               <---------AHL20(1)                         <<<<<<<<<<<<<<<<<LFY     <---------ANAC55(2)            --------->AHL20(1)                      <-----------GT1           <---------ANAC46                 <-----------ARR10                  <----------DOF2            ------>ZmHOX2a(1)  <---------ATHB12--------->RVE1(1)<---      --------->MYB46(3)--------->ANAC46   ----------->RAV1(2)--------->WOX13(1)--------->CCA1(1)----   atctccaaaccaatgggcttctttttacgacattgggcttaatattcctggcccgtaaataaatcaatgaaacgactacttaatatcttatccagtaaaa  7207700                                            --------->ANAC58                                            --------->ANAC55(1)                                            --------->ANAC58                                            --------->AtLEC2                                            --------->ANAC46                                       --                                           <---------LBD16                                       ====                                         ------>ZmHOX2a(2)                                --------->ANAC58                                        <------ZmHOX2a(2)                      ------->GAMYB ------->TEIL                                       --------->ARR14(2)                      ======================   ----------->GT1                 <---------LBD16    <-----------GT1         --------->MYB46(3) <--- ---->DOF2                      ------>NtERF2    --------->ICU4              -------->P   --------->ANAC46 >GT1                          ----------------------->TaNAC69(2)   <-------TEIL          --------->ANAC58 ------------AtSPL8  --------->ARR14(2)<-----------ARR10--------->ZAT6  --------->ZAT6  --------->ZAT6 ----->DAG2          <---------GLK1(2) <---------ARR14(2)--------->TOE2(3)   ========================   aggtagagaaaaaaaaaacacaatattctctctctgcctcggatccacgcaactattaaccctagttagattcaacactaaccacagttaacacgaaccc  7207800              <-------MYC4              ------->MYC4              ------->PIF5              <-------PIF5              <-------MYC3              <-------MYC2              ------->MYC2              ------->MYC3             <---------TGA1a             --------->TGA1a             --------->O2             --------->ANAC46             --------->ANAC55(2)             =======================MYC_MYB                                              *TSS             <---------O2                                                               ------------>CBF           <---------ALFIN1  <-----------HVH21                                         --------->ANAC58         ------>ZmHOX2a(1)  ------->GAMYB                                              --------->ANAC46 ---------->CBF          --------->MYB52(1)                                        <-----------HVH21 ======================bZIP_DOF                                          --------->TOE2(3)     ------ ======================MYC_MYB          <---------ICU4       --------->ZAT6       <----------DOF2 -------DOF2 ==================================================bZIP_DOF  --------->TOE1(3)   -------- ======================MYC_MYB       --------->YAB1 <----------DOF2--------->AtMYB61   --------->ANAC58   tttcaatcttcctccacgtgtcaaaatcaacggtcacaaaaatcatttccttctctttataaaacactaccaaaaccctaatctctttcacacaatcaca  7207900                                                                                             --------                                                                                           --------->LBD16                                                                                           ------>NtERF2                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                      --------->GLK1(1)                                                                                      <---------GLK1(1)                                                                                   <------NtERF2                                                                                  ------>NtERF2<-----                                                                                <-------GAMYB<-------                                                                               <---------DEAR3(2)                                                       ---------->DOF2         <---------MYB46(3)                                                    --------->TOE2(3)         <---------DREB2C(2)   <                                                ------->GAMYB                 <---------At1g77200   -   ------>MYB46(1)                             --------->MYB46(3)             <---------DEAR3(1)   <-   ------>MYB83                                <---------MYB52(2)             <---------MYB46(3)  <-- <---------MYB59    --------->WOX13(1)       ----------->RAV1(1)             <---------MYB52(1)<----- --->ANAC46       <---------ATHB12          <----------ID1                  <-----------HVH21-------- ->YAB1         --------->WOX13(1)---------->DOF2   --------->TOE1(3)  ----------->HVH21  --------->ANAC46   gaacctaatcttcttctccaatcaatctcagagaaaaaaagaaatggcaacaaaccctaaagtctacttcgacatgaccgtcggtggcaaatccgccggt  7208000                                   <---------ARR14(2)                       --------->ANAC46                     ----------->RAV1(1)       <---------REM1(1) --------->ANAC46  <---------ANAC58   ------>NtERF2 --------->ARR14(2)  <---------ANAC58  --------->DEAR3(1)  --------->YAB1    --------->RAP2.6(2)      <---------GLK1(2)  <---------ANAC46  <---------ETT(1) --------->DEAR3(2)           --------->LBD16 ->DEAR3(1)         --------->RAP2.3(3)   ------>NtERF2          <---------ANAC46 ------HVH21        --------->At1g77200   --------->LBD16       <---------LBD16 --ATERF1(2)        --------->DEAR4(1)------->GAMYB   <---------ZAT14 ---------ARR14(2)  --------->DREB2C(2)  --------->DEAR3(1)    ------->TEIL                   ------- -------->ARR14(2) --------->RAP2.3(1)--------->DEAR3(1)     <---------ZAT14     ----------->GT1 --------CCA1(2)   --------->ORA47(2)--------->MYB46(3)      --------->ZAT14  --------->GLK1(2) -------SPL7     --------->ANAC46 ---------->DOF2     --------->ZAT18        --------->ARR14(2) ----MYB52(1)<----------DOF2    --------->ANAC46      --------->ZAT14        <---------ARR14(2) ->ATERF1(2) <---------DAG2  ----------->RAV1(1)      <---------ZAT18       <------ZmHOX2a(1) -------   cgtatcgtgatggagctttacgccgacacaacaccagaaaccgccgagaatttcagagcactctgtaccggagagagaggaatcggtaaacaaggtaagc  7208100                                                                                 <---------LBD16                                                                        <------NtERF2                                                                      <---------LBD16              <------ZmHOX2a(2)                                      <---------LBD16        ---------->DOF2                                             <---------ZAT2         ------->TEIL    --------->ANAC46    <---------At5g28300                         --------->ZAT2 --------->LBD16  --------->ZAT6     <-----------HVH21                             --------->DEAR3(1)      --------->GLK1(2) --------->ZAT14    <----------DOF2             <-----------HVH21<---------At5g28300 <---------DEAR3(1) -->ANAC58   --------->ARR11(3)           <-------TEIL          <-----------GT1 --------->MYB52(1) -->ANAC58  <------ZmHOX2a(1)        --------->LBD16    ----------->GT1--------->LBD16----------->GT1   cattacactacaaaggatcaagctttcaccgagtgattccgaaattcatgtgtcaaggaggtgatttcacagccgggaatggtaccggaggtgaatctat  7208200                                                                                            ------>ZmHOX2a(2)                                                                                           <---------GLK1(1)                                                                                          <---------ARR11(3)                                --------->ANAC58                                          --------->ARR11(3)                         <---------------AGL15                                     --------->ANAC58                         <---------DAG2        <-----------RAV1(2)                 --------->ANAC58                         <----------DOF2    <------ZmHOX2a(1)      --------->MYB52(1)     ------->TEIL             ---------->DOF2    --------->ANAC58   <---------RVE1(1)        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     ------>ZmHOX2a(2)<---------ARR11(3)<-------TEIL               <---------DOF5.7(2)    <---------AGP1   ctatggatcgaagttcaaagacgagaactttatcaagaaacatacaggaccaggtattttgtctatggctaacgctggtgcgaacacgaatggatctcag  7208300                                                           <---------MYB46(3)                                                     <<<<<<<<<<WRKY43                                                     --------->WRKY18(1)                                                     <<<<<<<<<<WRKY26                                                     <<<<<<<<<<WRKY38                                                   <------MYB83                                                   <------MYB46(1)                                 <-                                                  <XXXXXXXXXXXXXXXXXXXMIR773B*                     <-                                                  --------->MYB59                                <---     <---------------AtSPL8                   <---------ANAC46                                 <-----  <---------AHL20(2)  <---------ANAC58        <---------YAB1                         <---------ARR11(3) <---------AHL20(2)   <---------ANAC58      <---------ANAC46                         --------->ARR11(3)   ttttttatttgtactgagaagacttcgtggctcgatgggaaacatgttgtgtttggtcaagttgttgagggattgaatgttgttagagatattgagaagg  7208400  Previous    Next  AGI:  At2g16600.1    Description:  ROC3 (rotamase CyP 3); peptidyl-prolyl cis-trans isomerase. Identical to Peptidyl-prolyl cis-trans isomerase CYP19-1 (CYP19-1) [Arabidopsis Thaliana] (GB:Q38900); similar to peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase [Arabidopsis thaliana] (TAIR:AT2G21130.1); similar to cyclophilin [Thellungiella halophila] (GB:AAR27291.1); contains InterPro domain Cyclophilin-like (InterPro:IPR015891); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; (InterPro:IPR002130) Range:  from: 7207889    to: 7208656    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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