Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ANAC55(2)                             <---------ANAC55(1)                             <---------ANAC58                             --------->ANAC55(2)                         <---------ANAC58                         <---------ANAC58                                               <------ZmHOX2a(2) ------->GAMYB          --------->At4g35610                                        <---------At4g35610 -------->MYB46(3)      <---------At4g35610                                    ------>ZmHOX2a(2) ---------GT1        <---------MYB52(1)    ------>ZmHOX2a(1)                  <------ZmHOX2a(2)     < --->TOE2(3)        <----------DOF2  <<<<<<<<<TBF1          <---------YAB1   --------->ARR11(3)     < -----DOF2------>ZmHOX2a(2)  <---------ANAC58            <---------YAB1      <---------ARR11(3)    --   taaccatctcgatctcaatctcctttagcttacgtcttcttcttcctcgtcttctcagtttgattattcaaactgttgagatctcatcggatcatggaag  7193700       ---------->DOF2   ------>ZmHOX2a(2)  <------ZmHOX2a(2) <---------ARR14(3) --------->AGP1 --------->ARR14(3) <---------ARR14(2) <---------AGP1                                                        <---------ZAT2 --------->ARR14(2)                                        ------>MYB46(1)        <------ZmHOX2a(1) --------->ARR11(3)                                        ------>MYB83--------->At4g35610 <---------ARR11(3)      --------->ANAC58                <---------MYB59        <---------TOE2(3)  -- ---------CCA1(2)        --------->ANAC46      <---------YAB1          <---------At4g35610        --- ---------At4g35610      --------->ANAC58      --------->ICU4       ------>ZmHOX2a(1)             <-- --------->ARR10 <-------TEIL             --------->bZIP60(2)      --------->TOE2(3)           XXXXXX   tcagatcttgaaagaagagttcatcacaaggaatggtgagacccatgtcatgatcaaaaccaaactcttcctcagctcttctaaggagacattggaagtc  7193800          ---------->DOF2        --------->ANAC58                                        --------->ALFIN1           <------ZmHOX2a(2)        --------->ANAC58                                       --------->HSFC1(2)          ==========     --------->WRKY18(1)     ------->TEIL                      <---------HSFC1(2)   --------->ALFIN1   <------MYB46(1)           <---------ARR14(2)   <---------ANAC46       <---------ANAC46  ==========   <------MYB83              --------->ARR14(2)  <---------TOE1(2)       <---------ANAC58  ========== ------->ATHB12     <------ZmHOX2a(1)   <---------MYB52(1)--------->ANAC58   --------->REM1(1) ------>ICU4     --------->CCA1(2)     <-------GAMYB --------->ETT(2)    <---------ANAC58 <---------ARR11(3) -------YAB1   --------->CCA1(2)      <-----------RAV1(1) --------->ANAC58  <-------TEIL  --------->ARR11(3) XXXXXXXXXXXXXX>MIR1888     <---------CCA1(2)   ------>ZmHOX2a(1)     <---------MYB52(1) --------->GLK1(1)   aagattggtcaagaaagagataggaactatgtatctgcttctgttgtgtcctacgtagacagggaagtgtcccttgggtacatcaagtgggagatcaact  7193900              ------>ZmHOX2a(1)           ------>ZmHOX2a(1)          <---------ALFIN1                          --------->At4g35610        ------>ZmHOX2a(1)                          <-----------ARR10    --------->ARR14(2)                  <---------ARR11(3)    <---------ARR14(2)     --------->HSFB2a(2)     --------->GLK1(2)   <---------CCA1(2)  <<<<<<<<<TBF1     --------->ARR11(3)    <---------ICU4                <-------- ====================HOX2a_HOX2a<---------ZAT2     <---------ARR14(2)                       <-------- =================HOX2a_HOX2a   --------->ZAT2     --------->ARR14(2)                    <---------GLK1(1) ==============HOX2a_HOX2a <---------HSFB2a(2)    <---------GLK1(2)                <---------ANAC46   tcttcatatcctcctcctccattcttcttccccaagcttgaacatctcttcagaatctgcctaagcattgctgtttgagccagttttgtagatttcttga  7194000                                           <-------GAMYB                                          --------->MYB55(2)                                          <---------MYB46(3)                                 --------->HSFC1(2)                                 <---------HSFC1(2)                                 --------->HSFB2a(1)                          <------------CBF                                 <---------HSFB2a(1)                        --------->ARR14(2)                                <-----------ARR10                           --------->ARR11(3)                                --------->GLK1(2)                           <---------ARR14(2)      <                                <---------ARR14(2)                        <---------MYB46(3)      <--                                --------->ARR14(2)                     <---------ANAC58           ---                                <---------ARR11(3)                     <---------ANAC46          ----                                --------->ARR11(3)                     <---------ANAC58     ---------                               <---------GLK1(2)                       <------MYB46(1)--------->ALFIN1                               <---------ARR14(1) *TSS                 <------MYB83  <------ZmHOX2a(1)                     --------->MYB55(2)   --------->MYB111(1)         --------->MYB111(2) ----------- -ANAC58             <---------MYB46(3)   --------->MYB111(2)         --------->MYB55(2) <---------AtMYB61 -ANAC58         <---------AtMYB61       <--------P                   <---------MYB46(3)<------ZmHOX2a(1)   gaatggacatttttgttttttggtggtttgagagaatcttctggttgttggagagagagagagagagagagttgggtggatattgaaggaggaggtgtaa  7194100                       <---------ANAC46                                 <<<<<<<<<<<<<<<<<LFY                  <-----------RAV1(1)                                   ----------->RAV1(1)                 ------->MYC3                                           --------->RAP2.6(2)  --------->YAB1 <-------MYC2                                        --------->ANAC46 -----------TBP------->TEIL                                          --------->ANAC58 -------AHL20(2) ------->MYC2                            --------->CCA1(2) ------>AHL20(2) <-------MYC3                           <---------ARR11(3) ----->ICU4 --------->ANAC58                            --------->ARR11(3) -->GT1     --------->ANAC58                     --------->DAG2      --------->ANAC58 >GT1---------->DOF2 <---------ANAC46           ---------->DOF2--------->ALFIN1   ---------->DOF2   <   atatttataaaggcatgcatgtgttgtgtaatgtctatgtgtctaagtgaaaaagtgagatatatgtgtggaagccacaatggcaaaagtcattagaagt  7194200                                                         <---------ZAT2                                                       <---------ALFIN1                                                    ------>ZmHOX2a(2)                                                   --------->GLK1(1)                      <---------ANAC46                                                   <---------GLK1(1)                <---------WOX13(1)                                                  --------->ARR14(2)              --------->ATHB12                        <---------YAB1            --------->ARR11(3)              <---------ICU4                   <---------------AGL15          <---------ARR11(3)             <---------YAB1                   ------>ZmHOX2a(1)              <---------ARR14(2)     <---------ARR11(3)              <------MYB46(1)                    <---------CCA1(2) <-----------GT1--------->ATHB51              <------MYB83                   <---------ANAC46 <---------ANAC46   <---------ATHB12          <-----------RAV1(1)             --------->PCF5 ----------->RAV1(2)     <---------ATHB51 -----------GT1 ---------->ID1      --------->ICU4<---------AGP1----------->GT1  --------->ICU4   tataaccattttttgttggtcctcttatgagttatgacattatggtcccttggatctccacctggtttgtaacaagataacccataattgctatgtggat  7194300                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)                                                           <---------AGP1                                                           --------->ARR14(2)                                                   ----------->HVH21                            <----                                                  <-----------HVH21                           <------                                              <---------ARR14(2)                          <---------AHL20(2)                                              <---------ARR11(3)                          --------->AHL20(2)                                       <---------ARR14(2)  <-----------ARR10            <----------DOF2                                       >>>>>>>>>GATA-1     <---------ARR14(2)          ------>ZmHOX2a(2)                                       >>>>>>>>>GATA-4    <---------CCA1(2)          <---------ARR11(3)                   <----------DOF2     >>>>>>>>>GATA-3 <---------LBD16           <---------ANAC46                   <---------DAG2      >>>>>>>>>GATA-2<---------ANAC46           <---------ANAC58             --------->ZAT6----------->GT1    --------->ARR14(2)                 <---------ANAC58             --------->ANAC46   <---------YAB1--------->GLK1(2)    <---------TOE2(3) --------->ARR11(3)   ttaaaacatatgtatacactactttagggatgttataagtggattcaaaatctgtgactcggatctatttatgttttagtatggcctgatctttaattaa  7194400                 --------->AHL20(1)                                                              ----                 --------->AHL20(2)                                                             <----        ----------->GT1                                                                       <------      ---------->DOF2                                                 --------->MYB52(1)     --------   <---------HSFB2a(2)                                         <-----------RAV1(1)        <---------YAB1   --------->HSFB2a(2)                                         <---------ANAC58     --------->AHL20(2) -------------AG <---------AHL20(2)         <-----------HVH21  <---------ANAC58     <---------AHL20(1) ---AHL20(2)    --------->AHL20(2)    ----------->HVH21  <---------YAB1             <---------AHL20(2)   tggttttggaaagaaaaaaaaaattgaagtggaataagaccggacatgtcaaacacagtatttttgtgtggctaactgcatgctaattaattctcattat  7194500                       <------MYB83                       <------MYB46(1)                                                 --------->ICU4            --------->ANAC46                                                        <---------YAB1            ----------->RAV1(1)                      --------->ATHB12             ----------->GT1<--- ----->YAB1--------->MYB46(3)               <---------bZIP60(1)                  <---------AtMYB61 -----YAB1--------->ANAC58        --------->ANAC46  <---------YAB1         --------->DAG2        ---- ---ICU4  --------->ANAC58  <-------GAMYB   --------->bZIP60(1)           ---------->DOF2 <---------YAB1 ->ICU4 <---------ALFIN1   --------->MYB52(2)  --------->YAB1         --------->MYB59  <---------YAB1   cacaaaactcacacccacaataagttggtcagttacacactatatgaagtcataaccattggtccattgagttagggaaagtgatggtgataatttttga  7194600  Previous    Next  AGI:  At2g16580.1    Description:  auxin-responsive protein, putative. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G34760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82489.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 7191504    to: 7194050    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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