Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->MYB52(1)                                      --------->ANAC58                  <---------LBD16                                            --------->At4g35610    -                 <---------LBD16                                             <---------At4g35610  ---             <----------DOF2                                            --------->REM1(2)     -------            <---------HSFC1(2)                                       <---------ANAC46        --------            --------->HSFB2a(1)                                      <---------ANAC58       <--------            --------->HSFC1(2)                     <---------WRKY18(1) --------->ALFIN1     <--------          --------->ARR11(3)               ------->TEIL              <---------ANAC58       <--------          <---------ARR11(3)              <---------ALFIN1          <-------TEIL --------->ANAC58 <-- --->RAV1(2)<---------HSFB2a(1)       ----------->RAV1(2)          --------->ALFIN1 --------->MYB52(1)   taatggtttgaagaactttctcgggactaactgttacaatacctgcaccttcttgaccacgatgttgaagtgcgtggagagctaagtaacagagccgtga  7188900       <---------GLK1(1)       --------->GLK1(1)      --------->ARR14(2)      <---------ARR14(2)       <---------ALFIN1      <---------ARR11(3)      <---------ZAT14      --------->ARR11(3)      <---------ZAT18      <---------AGP1          --------->ZAT14     <---------CCA1(2)       --------->DEAR3(1)   <---------HSFB2a(2)      --------->ANAC58   --------->HSFB2a(2)      --------->ANAC58 -------->GLK1(2)           --------->ANAC46 ------>HSFC1(2)           ------>NtERF2 ---->HVH21             ------->GAMYB ->LBD16               --------->ANAC58 -ANAC58               --------->MYB46(3)           ---------->ID1                    --------->YAB1 -ANAC46               --------->ANAC46<---------HSFB2a(2)                    --------->DAG2 -ANAC58------>ZmHOX2a(2) <---------ALFIN1    <----------DOF2             --------->YAB1 -------HSFC1(2)       --------->ANAC58--------->HSFB2a(2)     <-------GAMYB---------->DOF2      <---   agcttctggatctccatagattccaacgacaccgcactcttctcgaggcttttcgtcgtcttcgtcgttgtggtaatcaaaaggggtatgagaattgtct  7189000                                                                                                   <-                                                                                                   <-          <------ZmHOX2a(1)                                    --------->ALFIN1              <------MYB46(1)     <---------REM1(1)                                      <------ZmHOX2a(1)                <------MYB83   <------MYB83              <---------ATERF1(1)       <------ZmHOX2a(1)                    <--------   <------MYB46(1)         <------ZmHOX2a(1)        <------ZmHOX2a(1)                  --------->ALFIN1  <---------AtMYB61     <------ZmHOX2a(1)         --------->ALFIN1                   --------->CCA1(2) ------LBD16   <------ZmHOX2a(1)                 <------ZmHOX2a(1)           <------ZmHOX2a(1) <-----   tcggatggtgaaggagaggagaagtaggaggagactccatggatgagtgaaggaggaggagaggagaggggagaaggaaggagagagagatggggaggtt  7189100                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                -----                                    <---------REM1(1)                                           -----                                  <------MYB83                                                 <-----                                  <------MYB46(1)                                            <-------                                <---------WOX13(1)                                         <---------       --------->ALFIN1       <---------MYB46(3)                                      <---------ANAC58 <------ZmHOX2a(1)            --------->ATHB12                                        <---------ANAC58 --------TOE1(3)             <-------TEIL                      <---------YAB1        --------->HSFC1(2) --------TOE2(3)            <--------P                       --------->ATHB12        <---------HSFC1(2) -AtMYB61                 ----------->GT1            <------MYB83---------->DOF2    --------->GLK1(2) -----DOF2<---------LBD16<---------AtMYB61           <------MYB46(1)            <------ZmHOX2a(1)----   taaggaagggtttggggaagagagggagaggttgattggtgtaagaagaattgtttggtttagtgattaaagagagggaagaggagaagcttgttgtggc  7189200  --------->AtLEC2 -----NtERF2 -------RAP2.6(3) ----NtERF2 --->NtERF2 ----->DEAR3(1) ------ATERF1(2) ----->ANAC58 ----->ATERF1(2) ----->RAP2.6(2) ----->ANAC46 -----RAP2.6(2)         <------MYB46(1) ---->ATERF1(1)         <------MYB83 ---->RAP2.3(1)        <---------TOE1(2) ----ATERF1(1)         <---------TOE2(2) --RAP2.6(2)       <-------TEIL --RAV1(1)  ---------->DOF2      ---------->ID1<----------DOF2                    ---------->DOF2 ----->ANAC58--------->DAG2    <-----------RAV1(1)                         *TSS ----------->HVH21   cgccatggaagacaaaaagggttcgtaggttttttgttgttctggtctgatttttgggacttaaaacagtttttgtgtctgtgtgaaagcgatagaacaa  7189300                                                  --------->AHL20(2)                                                  <---------AHL20(2)                                               --------->ARR11(3)                                               <---------AHL20(1)                                               --------->AHL20(1)                                        --------->LBD16                                      ----------->RAV1(2)                                     ------>NtERF2<---------AHL20(1)                                    --------->DEAR3(1)                                    <---------ALFIN1       <----------DOF2                             ----------->HVH21 <---------ARR11(3)                            <-----------HVH21--------->GLK1(2)         <---------ANAC46                       ----------->HVH21------>ZmHOX2a(1) <---------ANAC58                  <----------DOF2 <---------ATERF1(1)     <---------ANAC58    --------->ICU4   <-----   aaactggccaagggttttgacttttgtgactgtgaccgcctcctgagaatattttattttgctttcaagggttttgtgtaatactgggaagttgtttatg  7189400                                                              --------------->AGL15     ----------->GT1                                          <---------------AGL15                 -     --------->LBD16                                        ---------->ID1                          <    ------->GAMYB        --------->ALFIN1         <----------DOF2                               -----   <---------LBD16       <-----------RAV1(1)  <---------MYB59----------------->AGL2       ------>ZmHOX2a(1) ----YAB1              --------->ALFIN1   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       --------->GLK1(1)   tttcaaccggataaatgtttgaaatgtgtgtggcattggactattgggcctacttttattttggcccatattagaagtctcattcggcattcctcatcaa  7189500      --------->At4g35610  --------->ARR14(2)  --------->ARR11(3)  <---------ARR11(3)  <---------ARR14(2) <---------GLK1(1) --------->GLK1(1)                                               --------->YAB1 <---------RVE1(1)                                         --------->TOE2(3) --------->CCA1(1)                           <----------DOF2  --------->WOX13(1) --------->RVE1(1)                <----------DOF2   <---------At4g35610                          <xxx -------->ARR11(3)                <---------DAG2    --------->At4g35610                       <------ ---------ARR11(3)     --------->TOE2(3)   ---------->ID1  --------->YAB1                  --------->AtMYB61 ----->DOF2            <---------MYB59    <-----------GT1 ----------->GT1                 --------->At4g35610   aagatatctgctaaaacatcatatacctaaaaaaaacttttttttttctttttttgctgaatgttaatcaaaactaaattgctctctgtatcacctccac  7189600                                                                                              xxxxxxx                                                                                          <---------ANAC58                                                                                          --------->ANAC55(2)                                                                                          <---------ANAC55(1)                                                                        --------->AtLEC2  <---------ANAC55(2)                                                             ----------->HVH21       <---------ICU4                                                           --------->At4g35610     --------->TOE2(3)                                                           --------->ZAT2          xxxxxxxxxxxxxxxxxx                          <---------AtLEC2 <---------ZAT2  <---------ZAT2        -------->P   <------                  --------->AHL20(2)       --------->At4g35610       --------->ARR11(3)   <---------ANAC58                --------->ANAC58           <---------At4g35610   ---------->DOF2--------->MYB52(1)                --------->ANAC58           --------->ZAT2  <---------At4g35610  <-----------GT1 xxxxxxxxxxxxxxxxxxsmallRNA(si3)     <-------TEIL   <----------DOF2  <---------ARR11(3)   <---------ANAC46 ---ALFIN1      ----------->GT1     --------->ARR11(3)  <---------At5g28300   <---------MYB52(2)  ---   cctctgagttttatatgcaagtaaatttgcattacaaggttcttgagctggatgcttttacagctgacaaagacattcaaactaacctcattacgtgatc  7189700                                                                                xxxxxxxxxxxxxxxxxxxxx  <---------AtLEC2                                                             <---------TOE2(3) xxxxxxxxxxxxxxxx>smallRNA(si3)    ---------->DOF2                <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxx>smallRNA(si3)          --------->TOE2(3)                   --------->AtLEC2           <xxxxxxx ---ARR11(3)            ----------->GT1                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------>At4g35610     ---------->DOF2        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <-----------GT1   atctacatggaaactcaaaatagctaaagtaacatcaaaaagatgagtttgtaatcagatgtttgtccatccaaataagctaatgttttaaaccgtgtgc  7189800  Previous    Next  AGI:  At2g16570.1    Description:  ATASE (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1); amidophosphoribosyltransferase. similar to ATASE3 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 3), amidophosphoribosyltransferase [Arabidopsis thaliana] (TAIR:AT4G38880.1); similar to ATASE2 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2), amidophosphoribosyltransferase [Arabidopsis thaliana] (TAIR:AT4G34740.1); similar to 5-phosphoribosyl-1-pyrophosphate amidotransferase [Nicotiana tabacum] (GB:AAR06289.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47261.1); similar to unknown [Populus trichocarpa] (GB:ABK94696.1); contains InterPro domain Purine/pyrimi Range:  from: 7187227    to: 7189275    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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