Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------AHL20(1)                                                          ------->TEIL              --------->AHL20(1)                    <---------AHL20(2)                 <---------ANAC55(2)          --------->ARR11(3)                 <---------ICU4                        <---------YAB1           --------->YAB1  <----    <---------HSFB2a(2)                    <---------AHL20(2)      <-----------GT1  <---------ARR11(3)    --------->HSFB2a(2)<----------DOF2     --------->AHL20(2) ------->TEIL<-----------GT1  <------ZmHOX2a(1) <---------ARR11(3) <-----------GT1 <-------TEIL----------->GT1  <---------AHL20(2) --------->ICU4   caagttctaaaacttctaatatttactttcttcttatatacatatataaattgtattatgtatgtattttttctatttacaatgaaaatattaggaattt  7154700                                              ---------->DOF2                                            <---------YAB1                                          --------->ATHB51                                          -------->HAHB4                                          <---------AHL20(2)                                          <---------ICU4                                          -------->ATHB1                                          <--------HAHB4                                          --------->YAB1                                         <---------ATHB51                                       --------->YAB1                                       <---------ICU4                                 <---------ANAC46                                 <---------ANAC58                        <------NtERF2 --------->AHL20(2)                      --------->ETT(1)<---------AHL20(2)                          --------->DAG2                      <---------RAP2.6(2)<---------YAB1                          ---------->DOF2                     --------->RAP2.6(3) --------->ICU4            <---------ANAC55(2)     ------>ZmHOX2a(2)                   <-----------RAV1(1)--------->ICU4         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             ---------->ID1      --------->ANAC55(2)        ----------->GT1     <xxxxxxxxxxxxxxxxxxxx            <-----------GT1      <---------ANAC58       ---------->DOF2    ----------->GT1--------->GLK1(1) -----AHL20(2) <----------DOF2   <---------ANAC55(2)   <---------ATHB12<-----------RAV1(1)<------ZmHOX2a(2)   ttttttagtttttttttctttttgtcggccaagtttcgtattaattattaaagcccaataaagggtattacatatgctggtgaaaaagtccgatctctta  7154800                                                                                  <---------At4g35610                                                                               >>>>>>>>>>ABI5                                                                              --------->ANAC55(2)  --                                                                              --------->ANAC58    ---                                                                              <---------O2<-------MYC3                                                                              --------->O2------->MYC3                                                <---------AHL20(2)            --------->ANAC58    <--                                                --------->AHL20(2)            --------->bZIP60(2) <--                                        --------->ANAC46             ===================bZIP_DOF  <--                                        --------->ANAC58             ================================                                        --------->ANAC58         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       ------>MYB83 --------->YAB1   ---------->DOF2     --------->O2                                      <---------ALFIN1          --------->AHL20(2)--------->At4g35610                              --------->At4g35610---------->DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                              <---------At4g35610=======================================bZIP_DOF  ===                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------TOE2(3)>>>>>>>>>>BZIP12   <--                           <xxxxxxxxxxxxxxxxsmallRNA(i)  ----------->GT1      --------->ANAC46    ===               --------->AHL20(2)    --------->MYB46(3) <---------TOE1(3)     <---------ANAC55(2) ===               <---------AHL20(2)    ------->GAMYB<---------TOE2(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <----------DOF2    <xxxxxxxxxxxxxxxxsmallRNA(s) <---------TOE2(3)     --------->TGA1a     <--  <-----------GT1          <-------TEIL------>MYB46(1)--------->CCA1(2)       <---------TGA1a     --- xxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->DAG2--------->DAG2     <---------O2   ccatttacaactttgatttaaatctaaggtccagcttaacccacccaaatttaaagataaggttaagaaaataaagtgccacgtagcagacacatgtcta  7154900                                    <---------MYB46(3)                                   <--------P                                  <---------MYB52(1)                                  <-------GAMYB                                 <---------MYB46(3)                                 <---------DEAR3(2)                                <---------DEAR3(1)                               <------NtERF2                               --------->ATERF1(1)                               --------->DEAR4(2)                              ------>NtERF2                                <---------WRKY38(1)                              <---------RRTF1(1)                          <<<<<<<<<<WRKY26                              <---------ATERF1(1)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                              <---------RAP2.6(1)                        <-----------HVH21                              <---------ERF1                  <---------SPL7                             <---------DEAR3(1)               <---------MYB46(3)   --------->At4g35610       <---------RAP2.3(2)              <---------DEAR3(2)   <---------At4g35610       --------->DEAR3(1)              <---------DEAR3(1) ------->TOE1(2)            --------->RAP2.3(1)            ------>NtERF2<------MYB83 ------>TGA1a               --------->ATERF1(1)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -------ANAC58              <---------ABI4(2)   <---------ALFIN1     <---------ANAC58 -------TGA1a              <---------ATERF1(1) --------->MYB46(3)    <---------ANAC58 -------O2                 <---------RAP2.3(1)xxxxxxxxxxxxxxxx>smallRNA(s)<<<<<<<<<<WRKY43 =======bZIP_DOF           ------->GAMYB------>ZmHOX2a(2) <---------DEAR3(1)             <-------MYC2 ==================================MYC_MYB    <------ZmHOX2a(2) --------->ALFIN1         ------->MYC2 -------ANAC46            <---------DEAR3(1) <---------ARR14(2)<-------GAMYB   <---------ATHB12 ===========================================MYC_MYB      <---------LBD16<------MYB46(1)  <-------MYC3 ==================================MYC_MYB   --------->ARR14(2)<-----------HVH21   --------->ANAC46 -------ANAC58          --------->MYB52(1) --------->ANAC46--------->LBD16<<<<<<<<<<WRKY38 ------>O2  --------->ARR11(3)<---------RAP2.3(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)------->MYC3   acgtgagatgaagagatgttgaaacacaacggcgccggttgatccacgatccaccttgctccggcggtcgggcttggtcaaatcaacaccatgtgcttct  7155000               <----------DOF2             <------NtERF2            <---------ATERF1(1)            ------>NtERF2            --------->LBD16            <---------DEAR3(2)           <---------ATERF1(2)                   <---------AHL20(2)           --------->DEAR3(1)                    --------->AHL20(2)           --------->ATERF1(2)              <---------TOE2(3)           <---------DEAR3(1)              --------->YAB1           <----------ID1          --------->ATERF1(1)       --------->ANAC58             --------->DAG2                  <---          <---------LBD16           --------->AtLEC2            ---------->DOF2          <---------AHL20(2)     <---------ARR14(2)             --------->ANAC58           *TSS ----------->GT1      --------->AHL20(2)     --------->ARR14(2)             --------->ANAC46       ----------->GT1         <---------TOE2(3)-   tccacagtattcgccggctcttagtaactgaagactccatgccattaagaattttttaagagagaaaaaagggagaaaactttttaagaatttttttaaa  7155100                                                                                                 <xxx                                                                                                 xxxx                                                                                              xxxxxxx                                                                                              xxxxxxx                                                                                              xxxxxxx                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                           --------->ZAT14                                                                                          xxxxxxxxxxx                                                                                         ------------                                                                                        <xxxxxxxxxxxx                                                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                   --------------->AtSPL8   ---------->DOF2             <xxxxxxxxxxxx                                 --------->ARR14(2)     ----------->GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                 <---------ARR14(2)   <------------CBF  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                 --------->GLK1(2) <---------YAB1   <-----------GT1   <xxxxxxxxxxxxxx                        <---------ICU4           --------------->AGL15xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ------ICU4            --------->ICU4  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          <-----------HVH21 -------->YAB1        --------->AHL20(2)         ====================================================   aattataacccaaaatgttgacataaaaattagagaatatgtactagataactatgaattgtaaaagaattaacaaaatagctacggtgtcagagtacac  7155200                            --------------->AGL15                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                     <----------DOF2                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <---------DAG2                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 <-----------GT1     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(si3)    <---------ANAC46 xxxxxxxxxxxxxxxx>smallRNA(le3)    <---------ANAC58 xxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------ANAC58 --ZAT14        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ->ZAT14  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --ZAT18  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------AHL20(1) ->ZAT18  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->AHL20(1) xxxxxxxxxxxx>smallRNA(s2) <-----------------AGL1    <---------ANAC55(2)              xxxxxxxxxxxxxxx --->AtSPL8     <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <-----------GT1             --------->ZAT14 xxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <---------ZAT14 xxxxxxxxxsmallRNA(si3)   <-----------GT1     <---------AHL20(2)           --------->HSFB2a(2) xxxxxxxxxsmallRNA(i2)   <-----------GT1 <---------AHL20(2)                <---------HSFB2a(2)   <--- ===========================================MADS_MADS--------->ANAC55(2) <-----------GT1  --------->YAB1   cctctttcttcacttgcaattacctttttacccattttcgtattttatatatattacatgttattttccaaaaatttacagaacacttagaatcatctca  7155300                            <---------ARR11(3)                         --------->AtMYB61                         <---------ALFIN1                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      ------->GAMYB                              xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <---------MYB55(2)                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     --------->MYB46(3)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   xxxxxxxxxxxxxxxx>smallRNA(s)              xxxxxxxxxxxxxxxx>smallRNA(i)                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)        xxxxxxxxxxxxxxxx>smallRNA(i)                  --------->MYB46(3)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                <---------ALFIN1                         <----------DOF2     ------>NtERF2                --------->AtMYB61                --------->MYB46(3)xxxxxxxxxxxxxxx>smallRNA(si3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    xxxxxxxxxxxxxxxx>smallRNA(i)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->GLK1(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ARR14(2)     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             --------->DEAR3(1)                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       --------->AHL20(2)             <---------ALFIN1                 <---------ALFIN1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             --------->AtMYB61       --------->AtMYB61------>ZmHOX2a(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            --------->MYB46(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------At4g35610           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->ANAC46<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->MYB46(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ----- xxxxxxx>smallRNA(se3)--------->AtMYB61     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)           <---------AHL20(2) ------CCA1(2)----------->RAV1(1)    <---------ALFIN1<------ZmHOX2a(2)    --------->At4g35610  ------   tctctctttattccaccaccacaaccaccacatcttccaccatctcatccacccgatctctttttcgataaatctaggctgccaaatgttatttatattg  7155400                                     <---------AHL20(1)                                     --------->AHL20(2)                                     <---------AHL20(2)                                 <------------------------ANAC81                                ---------->ID1                                   <---------YAB1                           --------->ARR14(2)                                 <---------MYB52(1)                           --------->ARR11(3)                        <---------HSFC1(2)                           <---------ARR14(2)                        <---------HSFB2a(1)                           <---------ARR11(3)                        xxxxxxxxxxxxxxxx>smallRNA(i)                       <---------At4g35610                 <----------DOF2--------->LBD16     --------->At4g35610 ----------->ARR10           <---------YAB1  --------->HSFB2a(1)      <------ ---->YAB1           <---------HSFB2a(2)  <---------AHL20(2)       <---------GLK1(2)         -------- ----->GT1           --------->HSFB2a(2)  --------->AHL20(2)  --------------------->WRI1     <-------   ataaatcatctctccctcaatttgcagaagatttgtcattttattttattcgattttgattcttttttggaatctccgtcgttatgtttttttttttaaa  7155500                                          <-------MYC3                                          <-------MYC2                                          ------->MYC3                                         --------->O2                                         <---------TGA1a                                         <---------O2                                         --------->ANAC55(2)                                         ================================bZIP_DOF                                         <---------ANAC55(2)                           <---------DAG2--------->ANAC58                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     --------->ANAC58    --------->ANAC46                     --------->ANAC58    --------->TGA1a                   xxxxxxxxxxxxxxxx>smallRNA(i)--------->ATHB12                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<---------GLK1(1)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------ICU4         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ICU4        <---------AHL20(2) ========================bZIP_DOF       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------YAB1                                        -   <---------AHL20(2)--------->ANAC46    ================================bZIP_DOF       <-----------GT1 ---AHL20(2)    <-----------GT1          --------->ANAC58                          --------->AHL20(2) ->AHL20(2)========================================bZIP_DOF   <----------DOF2 <---------DAG2        - --AHL20(2)<----------DOF2 <----------DOF2------->MYC2--------->GLK1(1)       <----------DOF2     <--   tttgttttattttcttttataccacgctactttttcgaattacacgtgataattggaaatctctctttgtcaatatgctacttttttatataacacacta  7155600  Previous    Next  AGI:  At2g16490.1    Description:  XH domain-containing protein. similar to XH/XS domain-containing protein / XS zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G15910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64047.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83544.1); contains InterPro domain Region of unknown function XH (InterPro:IPR005379) Range:  from: 7153082    to: 7155063    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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